Conservation of cofitness between GFF4697 and GFF6151 in Variovorax sp. SCN45

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF4697 TldE protein, part of TldE/TldD proteolytic complex 1.0 GFF6151 Transcriptional regulator, LysR family 0.85 18
Variovorax sp. OAS795 0.96 ABID97_RS20695 metalloprotease PmbA 0.92 ABID97_RS09325 LysR family transcriptional regulator — —
Acidovorax sp. GW101-3H11 0.81 Ac3H11_3262 TldE protein, part of TldE/TldD proteolytic complex 0.74 Ac3H11_4344 Regulatory protein, LysR:LysR, substrate-binding low > 79
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS09265 peptidase C69 0.25 HSERO_RS08550 LysR family transcriptional regulator low > 78
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS13965 metalloprotease PmbA 0.16 RALBFv3_RS16320 LysR family transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.60 UW163_RS15845 metalloprotease PmbA 0.16 UW163_RS17060 LysR family transcriptional regulator — —
Ralstonia solanacearum PSI07 0.59 RPSI07_RS19505 metalloprotease PmbA 0.17 RPSI07_RS07380 LysR family transcriptional regulator low > 81
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS09660 metalloprotease PmbA 0.29 ABZR87_RS16045 LysR family transcriptional regulator low > 80
Paraburkholderia graminis OAS925 0.59 ABIE53_003116 PmbA protein 0.28 ABIE53_001288 DNA-binding transcriptional LysR family regulator low > 113
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_04304 microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62 0.27 H281DRAFT_00177 transcriptional regulator, LysR family low > 103
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS14750 peptidase PMbA 0.27 RR42_RS02460 LysR family transcriptional regulator low > 128
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS04270 metalloprotease PmbA 0.29 QEN71_RS03395 LysR family transcriptional regulator low > 153
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS14705 peptidase C69 0.34 BPHYT_RS31520 LysR family transcriptional regulator low > 109
Ralstonia solanacearum GMI1000 0.57 RS_RS04700 metalloprotease PmbA 0.17 RS_RS24690 LysR family transcriptional regulator low > 80
Pseudomonas sp. RS175 0.46 PFR28_00163 Metalloprotease PmbA 0.34 PFR28_05261 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_3278 TldE protein, part of TldE/TldD proteolytic complex 0.36 Pf6N2E2_3464 LysR family transcriptional regulator PA0133 low > 103
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_07085 peptidase PmbA 0.36 AO356_07960 LysR family transcriptional regulator low > 104
Pectobacterium carotovorum WPP14 0.45 HER17_RS20090 metalloprotease PmbA 0.17 HER17_RS12330 LysR family transcriptional regulator low > 75
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS04350 metalloprotease PmbA 0.36 PFLU_RS03320 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.45 PFLU_RS04350 metalloprotease PmbA 0.36 PFLU_RS03320 LysR family transcriptional regulator low > 109
Rahnella sp. WP5 0.45 EX31_RS12320 metalloprotease PmbA 0.31 EX31_RS06810 LysR family transcriptional regulator low > 89
Pseudomonas putida KT2440 0.44 PP_0942 regulatory protease 0.33 PP_0595 Transcriptional regulator, LysR family low > 96
Pseudomonas simiae WCS417 0.44 PS417_04295 peptidase PmbA 0.36 PS417_03240 LysR family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_1090 TldE protein, part of TldE/TldD proteolytic complex 0.35 Pf1N1B4_1240 LysR family transcriptional regulator PA0133 low > 87
Serratia liquefaciens MT49 0.44 IAI46_22575 metalloprotease PmbA 0.61 IAI46_02650 LysR family transcriptional regulator low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_4154 microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 0.35 Psyr_0677 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_4154 microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 0.35 Psyr_0677 transcriptional regulator, LysR family low > 86
Pseudomonas sp. S08-1 0.44 OH686_08570 TldE protein, part of TldE/TldD proteolytic complex 0.34 OH686_07320 LysR family transcriptional regulator low > 80
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_5024 TldE protein, part of TldE/TldD proteolytic complex 0.35 PfGW456L13_4 LysR family transcriptional regulator PA0133 low > 87
Klebsiella michiganensis M5al 0.44 BWI76_RS02850 metalloprotease PmbA 0.25 BWI76_RS21930 LysR family transcriptional regulator low > 92
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_05205 peptidase PmbA 0.35 AO353_06090 LysR family transcriptional regulator low > 101
Dickeya dadantii 3937 0.43 DDA3937_RS01500 metalloprotease PmbA 0.18 DDA3937_RS09645 LysR family transcriptional regulator low > 74
Dickeya dianthicola ME23 0.42 DZA65_RS01480 metalloprotease PmbA 0.17 DZA65_RS09965 LysR family transcriptional regulator low > 75
Shewanella amazonensis SB2B 0.42 Sama_0482 PmbA protein (RefSeq) 0.30 Sama_1630 LysR family transcriptional regulator (RefSeq) low > 62
Dickeya dianthicola 67-19 0.42 HGI48_RS01415 metalloprotease PmbA 0.17 HGI48_RS09655 LysR family transcriptional regulator low > 71
Azospirillum brasilense Sp245 0.33 AZOBR_RS11930 modulator protein 0.32 AZOBR_RS30800 transcriptional regulator low > 97
Azospirillum sp. SherDot2 0.30 MPMX19_01886 Metalloprotease PmbA 0.37 MPMX19_05490 hypothetical protein low > 112
Rhodospirillum rubrum S1H 0.26 Rru_A0575 Peptidase U62, modulator of DNA gyrase (NCBI) 0.31 Rru_A1540 Transcriptional Regulator, LysR family (NCBI) low > 58

Not shown: 49 genomes with orthologs for GFF4697 only; 1 genomes with orthologs for GFF6151 only