Conservation of cofitness between PS417_12555 and PS417_27435 in Pseudomonas simiae WCS417

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_12555 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) 1.0 PS417_27435 polyphosphate kinase 0.27 9
Pseudomonas fluorescens SBW25 0.95 PFLU_RS13240 D-glycerate dehydrogenase 0.99 PFLU_RS29095 polyphosphate kinase 1 low > 109
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS13240 D-glycerate dehydrogenase 0.99 PFLU_RS29095 polyphosphate kinase 1 low > 109
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_4763 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.93 Pf1N1B4_2208 Polyphosphate kinase (EC 2.7.4.1) low > 87
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_26885 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) 0.93 AO353_08885 polyphosphate kinase low > 101
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_2948 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.94 PfGW456L13_874 Polyphosphate kinase (EC 2.7.4.1) low > 87
Pseudomonas sp. RS175 0.80 PFR28_01596 Glyoxylate/hydroxypyruvate reductase B 0.94 PFR28_04345 Polyphosphate kinase low > 88
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_627 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.96 Pf6N2E2_4453 Polyphosphate kinase (EC 2.7.4.1) low > 103
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_24675 bifunctional glyoxylate/hydroxypyruvate reductase B 0.93 AO356_12895 polyphosphate kinase low > 104
Pseudomonas putida KT2440 0.68 PP_3376 putative phosphonate dehydrogenase 0.89 PP_5217 Polyphosphate kinase low > 96
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS07550 bifunctional glyoxylate/hydroxypyruvate reductase B 0.46 HSERO_RS06305 polyphosphate kinase low > 78
Enterobacter sp. TBS_079 0.56 MPMX20_00177 Glyoxylate/hydroxypyruvate reductase B 0.26 MPMX20_03356 Polyphosphate kinase low > 85
Klebsiella michiganensis M5al 0.54 BWI76_RS26960 bifunctional glyoxylate/hydroxypyruvate reductase B 0.26 BWI76_RS20995 RNA degradosome polyphosphate kinase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF458 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 0.26 GFF2167 Polyphosphate kinase (EC 2.7.4.1) low > 78
Escherichia coli Nissle 1917 0.54 ECOLIN_RS20330 glyoxylate/hydroxypyruvate reductase GhrB 0.26 ECOLIN_RS14200 polyphosphate kinase 1 low > 52
Escherichia coli BL21 0.54 ECD_03403 glyoxylate/hydroxypyruvate reductase B 0.26 ECD_02393 polyphosphate kinase, component of RNA degradosome low > 60
Escherichia coli ECOR38 0.54 HEPCGN_14910 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.26 HEPCGN_20965 ppk1 polyphosphate kinase 1 low > 85
Escherichia coli ECOR27 0.54 NOLOHH_07965 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.26 NOLOHH_13450 ppk1 polyphosphate kinase 1 — —
Escherichia coli ECRC101 0.54 MCAODC_06535 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.26 MCAODC_12330 ppk1 polyphosphate kinase 1 — —
Escherichia coli ECRC98 0.54 JDDGAC_19650 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.26 JDDGAC_25745 ppk1 polyphosphate kinase 1 — —
Escherichia coli ECRC102 0.54 NIAGMN_13780 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.26 NIAGMN_19570 ppk1 polyphosphate kinase 1 — —
Escherichia coli ECRC62 0.54 BNILDI_03580 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.26 BNILDI_12260 ppk1 polyphosphate kinase 1 — —
Escherichia coli ECRC99 0.54 KEDOAH_12130 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.26 KEDOAH_06420 ppk1 polyphosphate kinase 1 — —
Escherichia fergusonii Becca 0.54 EFB2_00254 Glyoxylate/hydroxypyruvate reductase B 0.26 EFB2_01397 Polyphosphate kinase low > 86
Escherichia coli ECRC101 0.54 OKFHMN_16020 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.26 OKFHMN_21800 ppk1 polyphosphate kinase 1 — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_00153 Glyoxylate/hydroxypyruvate reductase B 0.26 OHPLBJKB_01225 Polyphosphate kinase low > 73
Escherichia coli BW25113 0.54 b3553 yiaE putative dehydrogenase (VIMSS) 0.26 b2501 ppk polyphosphate kinase (NCBI) low > 76
Enterobacter asburiae PDN3 0.52 EX28DRAFT_3817 Lactate dehydrogenase and related dehydrogenases 0.25 EX28DRAFT_0166 polyphosphate kinase 1 low > 76
Rahnella sp. WP5 0.52 EX31_RS05925 glyoxylate/hydroxypyruvate reductase GhrB 0.25 EX31_RS22680 polyphosphate kinase 1 low > 89
Serratia liquefaciens MT49 0.52 IAI46_00085 glyoxylate/hydroxypyruvate reductase GhrB 0.25 IAI46_18915 polyphosphate kinase 1 low > 86
Pectobacterium carotovorum WPP14 0.51 HER17_RS21175 glyoxylate/hydroxypyruvate reductase GhrB 0.26 HER17_RS06425 polyphosphate kinase 1 low > 75
Pantoea sp. MT58 0.51 IAI47_00110 glyoxylate/hydroxypyruvate reductase GhrB 0.25 IAI47_05155 polyphosphate kinase 1 0.39 40
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS07265 D-glycerate dehydrogenase 0.45 QEN71_RS04860 polyphosphate kinase 1 low > 153
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS09030 NAD(P)-dependent oxidoreductase 0.46 ABZR87_RS14065 polyphosphate kinase 1 0.46 20
Dickeya dianthicola 67-19 0.49 HGI48_RS00175 glyoxylate/hydroxypyruvate reductase GhrB 0.26 HGI48_RS15225 polyphosphate kinase 1 low > 71
Dickeya dianthicola ME23 0.49 DZA65_RS00195 glyoxylate/hydroxypyruvate reductase GhrB 0.26 DZA65_RS16045 polyphosphate kinase 1 low > 75
Castellaniella sp019104865 MT123 0.47 ABCV34_RS08615 D-glycerate dehydrogenase 0.45 ABCV34_RS15580 polyphosphate kinase 1 low > 48
Variovorax sp. SCN45 0.46 GFF2715 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.39 GFF1089 Polyphosphate kinase (EC 2.7.4.1) low > 127
Dickeya dadantii 3937 0.46 DDA3937_RS21080 glyoxylate/hydroxypyruvate reductase GhrB 0.26 DDA3937_RS15150 polyphosphate kinase 1 low > 74
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS09465 bifunctional glyoxylate/hydroxypyruvate reductase B 0.48 RR42_RS31480 polyphosphate kinase low > 128
Variovorax sp. OAS795 0.43 ABID97_RS20025 D-glycerate dehydrogenase 0.39 ABID97_RS14575 polyphosphate kinase 1 low > 91
Ralstonia solanacearum GMI1000 0.41 RS_RS21645 D-glycerate dehydrogenase 0.44 RS_RS07705 polyphosphate kinase 1 low > 80
Ralstonia solanacearum PSI07 0.41 RPSI07_RS02805 D-glycerate dehydrogenase 0.45 RPSI07_RS15330 polyphosphate kinase 1 low > 81
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF3835 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 0.41 GFF4226 Polyphosphate kinase (EC 2.7.4.1) low > 90
Acidovorax sp. GW101-3H11 0.38 Ac3H11_2599 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 0.40 Ac3H11_452 Polyphosphate kinase (EC 2.7.4.1) low > 79
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS14340 D-glycerate dehydrogenase 0.45 RALBFv3_RS02115 polyphosphate kinase 1 low > 76
Ralstonia solanacearum UW163 0.33 UW163_RS11805 D-glycerate dehydrogenase 0.45 UW163_RS15425 polyphosphate kinase 1 — —
Rhizobium sp. OAE497 0.32 ABIE40_RS14685 D-glycerate dehydrogenase 0.31 ABIE40_RS06575 RNA degradosome polyphosphate kinase low > 107
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS12365 D-glycerate dehydrogenase 0.31 A4249_RS08195 RNA degradosome polyphosphate kinase — —
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS06255 2-hydroxyacid dehydrogenase family protein 0.24 HMPREF1078_RS16770 RNA degradosome polyphosphate kinase low > 61
Dinoroseobacter shibae DFL-12 0.29 Dshi_2643 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding (RefSeq) 0.33 Dshi_0740 Polyphosphate kinase (RefSeq) low > 64
Rhodospirillum rubrum S1H 0.27 Rru_A1815 Glycolate reductase (NCBI) 0.35 Rru_A2161 Polyphosphate kinase (NCBI) low > 58

Not shown: 0 genomes with orthologs for PS417_12555 only; 45 genomes with orthologs for PS417_27435 only