Conservation of cofitness between PS417_00945 and PS417_27040 in Pseudomonas simiae WCS417

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_00945 sulfate ABC transporter ATP-binding protein 1.0 PS417_27040 3-phosphoglycerate dehydrogenase 0.24 1
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS00960 sulfate ABC transporter ATP-binding protein 1.00 PFLU_RS28695 phosphoglycerate dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS00960 sulfate ABC transporter ATP-binding protein 1.00 PFLU_RS28695 phosphoglycerate dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_11555 sulfate ABC transporter ATP-binding protein 0.96 AO353_08510 3-phosphoglycerate dehydrogenase low > 101
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_483 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) 0.94 PfGW456L13_943 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 87
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_4002 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) 0.97 Pf6N2E2_3932 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 103
Pseudomonas sp. RS175 0.97 PFR28_04765 Sulfate/thiosulfate import ATP-binding protein CysA 0.96 PFR28_04842 D-3-phosphoglycerate dehydrogenase low > 88
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_1724 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) 0.96 Pf1N1B4_2272 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 87
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_10670 sulfate ABC transporter ATP-binding protein 0.97 AO356_10300 3-phosphoglycerate dehydrogenase low > 104
Pseudomonas syringae pv. syringae B728a 0.94 Psyr_0081 ABC transporter 0.95 Psyr_4852 D-3-phosphoglycerate dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.94 Psyr_0081 ABC transporter 0.95 Psyr_4852 D-3-phosphoglycerate dehydrogenase low > 86
Pseudomonas putida KT2440 0.93 PP_5168 sulfate/thiosulfate import ATP-binding protein 0.91 PP_5155 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase low > 96
Pseudomonas sp. S08-1 0.90 OH686_11685 Sulfate and thiosulfate import ATP-binding protein CysA 0.90 OH686_11280 D-3-phosphoglycerate dehydrogenase low > 80
Pseudomonas stutzeri RCH2 0.81 Psest_4063 sulfate ABC transporter, ATP-binding protein 0.89 Psest_3873 Phosphoglycerate dehydrogenase and related dehydrogenases — —
Pectobacterium carotovorum WPP14 0.78 HER17_RS05685 sulfate ABC transporter ATP-binding protein 0.64 HER17_RS02725 phosphoglycerate dehydrogenase low > 75
Dickeya dadantii 3937 0.77 DDA3937_RS15835 sulfate ABC transporter ATP-binding protein 0.65 DDA3937_RS18480 phosphoglycerate dehydrogenase low > 74
Dickeya dianthicola 67-19 0.76 HGI48_RS15975 sulfate ABC transporter ATP-binding protein 0.65 HGI48_RS18400 phosphoglycerate dehydrogenase low > 71
Dickeya dianthicola ME23 0.76 DZA65_RS17060 sulfate ABC transporter ATP-binding protein 0.65 DZA65_RS19540 phosphoglycerate dehydrogenase low > 75
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF5099 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) 0.76 GFF149 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 90
Variovorax sp. SCN45 0.59 GFF1290 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) 0.78 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 127
Shewanella oneidensis MR-1 0.56 SO4655 cysA-2 sulfate ABC transporter, ATP-binding protein (NCBI ptt file) 0.67 SO0862 serA D-3-phosphoglycerate dehydrogenase (NCBI ptt file) low > 76
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS12250 sulfate ABC transporter ATP-binding protein 0.46 RR42_RS27010 D-3-phosphoglycerate dehydrogenase low > 128
Azospirillum sp. SherDot2 0.55 MPMX19_04169 Sulfate/thiosulfate import ATP-binding protein CysA 0.59 MPMX19_00753 D-3-phosphoglycerate dehydrogenase — —
Azospirillum brasilense Sp245 0.53 AZOBR_RS19280 sulfate ABC transporter ATP-binding protein 0.58 AZOBR_RS10940 3-phosphoglycerate dehydrogenase — —
Pantoea sp. MT58 0.52 IAI47_05400 sulfate/thiosulfate ABC transporter ATP-binding protein CysA 0.65 IAI47_03725 phosphoglycerate dehydrogenase 0.45 44
Erwinia tracheiphila SCR3 0.52 LU632_RS06680 cysA sulfate/thiosulfate ABC transporter ATP-binding protein CysA 0.65 LU632_RS05855 serA phosphoglycerate dehydrogenase 0.68 51
Shewanella sp. ANA-3 0.51 Shewana3_3192 sulfate ABC transporter, ATPase subunit (RefSeq) 0.68 Shewana3_3416 D-3-phosphoglycerate dehydrogenase (RefSeq) low > 73
Escherichia coli ECRC99 0.51 KEDOAH_06055 cysA sulfate/thiosulfate ABC transporter ATP-binding protein CysA 0.65 KEDOAH_08680 serA phosphoglycerate dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_01301 Sulfate/thiosulfate import ATP-binding protein CysA 0.65 OHPLBJKB_00803 D-3-phosphoglycerate dehydrogenase low > 73
Escherichia coli ECRC102 0.51 NIAGMN_19935 cysA sulfate/thiosulfate ABC transporter ATP-binding protein CysA 0.65 NIAGMN_17225 serA phosphoglycerate dehydrogenase — —
Enterobacter sp. TBS_079 0.51 MPMX20_03314 Sulfate/thiosulfate import ATP-binding protein CysA 0.65 MPMX20_03771 D-3-phosphoglycerate dehydrogenase low > 85
Escherichia coli ECOR38 0.51 HEPCGN_21340 cysA sulfate/thiosulfate ABC transporter ATP-binding protein CysA 0.65 HEPCGN_18760 serA phosphoglycerate dehydrogenase low > 85
Escherichia coli ECRC101 0.51 OKFHMN_22165 cysA sulfate/thiosulfate ABC transporter ATP-binding protein CysA 0.65 OKFHMN_19460 serA phosphoglycerate dehydrogenase — —
Escherichia coli ECRC98 0.51 JDDGAC_26115 cysA sulfate/thiosulfate ABC transporter ATP-binding protein CysA 0.65 JDDGAC_23100 serA phosphoglycerate dehydrogenase — —
Escherichia coli ECRC62 0.51 BNILDI_12710 cysA sulfate/thiosulfate ABC transporter ATP-binding protein CysA 0.65 BNILDI_09905 serA phosphoglycerate dehydrogenase — —
Escherichia coli BW25113 0.51 b2422 cysA sulfate/thiosulfate transporter subunit (NCBI) 0.65 b2913 serA D-3-phosphoglycerate dehydrogenase (NCBI) 0.68 63
Escherichia coli ECRC101 0.51 MCAODC_12695 cysA sulfate/thiosulfate ABC transporter ATP-binding protein CysA 0.65 MCAODC_09980 serA phosphoglycerate dehydrogenase — —
Escherichia coli ECOR27 0.51 NOLOHH_13845 cysA sulfate/thiosulfate ABC transporter ATP-binding protein CysA 0.65 NOLOHH_11370 serA phosphoglycerate dehydrogenase low > 57
Escherichia coli BL21 0.51 ECD_02322 sulfate/thiosulfate transporter subunit 0.65 ECD_02744 D-3-phosphoglycerate dehydrogenase low > 60
Marinobacter adhaerens HP15 0.51 HP15_1347 sulfate/thiosulfate transporter subunit 0.75 HP15_2554 D-3-phosphoglycerate dehydrogenase-like protein — —
Klebsiella michiganensis M5al 0.51 BWI76_RS20690 sulfate ABC transporter ATP-binding protein 0.66 BWI76_RS23920 D-3-phosphoglycerate dehydrogenase low > 92
Escherichia coli Nissle 1917 0.51 ECOLIN_RS13905 sulfate/thiosulfate ABC transporter ATP-binding protein CysA 0.65 ECOLIN_RS16210 phosphoglycerate dehydrogenase — —
Escherichia fergusonii Becca 0.51 EFB2_01455 Sulfate/thiosulfate import ATP-binding protein CysA 0.65 EFB2_00990 D-3-phosphoglycerate dehydrogenase low > 86
Enterobacter asburiae PDN3 0.51 EX28DRAFT_0208 sulfate ABC transporter, ATP-binding protein 0.66 EX28DRAFT_2965 Phosphoglycerate dehydrogenase and related dehydrogenases — —
Rhodospirillum rubrum S1H 0.51 Rru_A3403 Sulphate transport system permease protein 1 (NCBI) 0.58 Rru_A2456 Phosphoglycerate dehydrogenase (NCBI) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF2056 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) 0.65 GFF3013 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 78
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_02865 sulfate/thiosulfate import ATP-binding protein CysA 0.64 CSW01_12555 phosphoglycerate dehydrogenase low > 62
Rhizobium sp. OAE497 0.50 ABIE40_RS24575 sulfate/molybdate ABC transporter ATP-binding protein 0.58 ABIE40_RS30040 phosphoglycerate dehydrogenase low > 107
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_10920 Sulfate ABC transporter 0.64 OKGIIK_10055 serA phosphoglycerate dehydrogenase low > 52
Lysobacter sp. OAE881 0.45 ABIE51_RS01840 sulfate/molybdate ABC transporter ATP-binding protein 0.62 ABIE51_RS13245 phosphoglycerate dehydrogenase 0.87 61
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS02895 ABC transporter ATP-binding protein 0.65 ABZR86_RS09635 phosphoglycerate dehydrogenase 0.82 69

Not shown: 16 genomes with orthologs for PS417_00945 only; 15 genomes with orthologs for PS417_27040 only