Conservation of cofitness between PS417_12555 and PS417_26000 in Pseudomonas simiae WCS417

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_12555 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) 1.0 PS417_26000 8-amino-7-oxononanoate synthase 0.47 2
Pseudomonas fluorescens SBW25 0.95 PFLU_RS13240 D-glycerate dehydrogenase 0.94 PFLU_RS27645 8-amino-7-oxononanoate synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS13240 D-glycerate dehydrogenase 0.94 PFLU_RS27645 8-amino-7-oxononanoate synthase 0.20 28
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_4763 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.89 Pf1N1B4_2488 8-amino-7-oxononanoate synthase (EC 2.3.1.47) low > 87
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_26885 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) 0.88 AO353_07520 8-amino-7-oxononanoate synthase low > 101
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_2948 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.88 PfGW456L13_1148 8-amino-7-oxononanoate synthase (EC 2.3.1.47) low > 87
Pseudomonas sp. RS175 0.80 PFR28_01596 Glyoxylate/hydroxypyruvate reductase B 0.87 PFR28_04102 8-amino-7-oxononanoate synthase low > 88
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_627 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.87 Pf6N2E2_4761 8-amino-7-oxononanoate synthase (EC 2.3.1.47) low > 103
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_24675 bifunctional glyoxylate/hydroxypyruvate reductase B 0.84 AO356_14140 8-amino-7-oxononanoate synthase low > 104
Pseudomonas putida KT2440 0.68 PP_3376 putative phosphonate dehydrogenase 0.77 PP_0363 8-amino-7-oxononanoate synthase low > 96
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS07550 bifunctional glyoxylate/hydroxypyruvate reductase B 0.39 HSERO_RS12245 8-amino-7-oxononanoate synthase low > 78
Enterobacter sp. TBS_079 0.56 MPMX20_00177 Glyoxylate/hydroxypyruvate reductase B 0.40 MPMX20_01404 8-amino-7-oxononanoate synthase low > 85
Klebsiella michiganensis M5al 0.54 BWI76_RS26960 bifunctional glyoxylate/hydroxypyruvate reductase B 0.34 BWI76_RS08765 8-amino-7-oxononanoate synthase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF458 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 0.38 GFF672 8-amino-7-oxononanoate synthase (EC 2.3.1.47) low > 78
Escherichia coli Nissle 1917 0.54 ECOLIN_RS20330 glyoxylate/hydroxypyruvate reductase GhrB 0.37 ECOLIN_RS04135 8-amino-7-oxononanoate synthase — —
Escherichia coli ECRC101 0.54 OKFHMN_16020 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.37 OKFHMN_06395 bioF 8-amino-7-oxononanoate synthase — —
Escherichia coli ECOR38 0.54 HEPCGN_14910 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.36 HEPCGN_01645 bioF 8-amino-7-oxononanoate synthase low > 85
Escherichia coli ECRC99 0.54 KEDOAH_12130 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.37 KEDOAH_21515 bioF 8-amino-7-oxononanoate synthase — —
Escherichia fergusonii Becca 0.54 EFB2_00254 Glyoxylate/hydroxypyruvate reductase B 0.37 EFB2_03329 8-amino-7-oxononanoate synthase low > 86
Escherichia coli ECRC101 0.54 MCAODC_06535 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.37 MCAODC_25610 bioF 8-amino-7-oxononanoate synthase — —
Escherichia coli ECOR27 0.54 NOLOHH_07965 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.36 NOLOHH_22765 bioF 8-amino-7-oxononanoate synthase low > 57
Escherichia coli ECRC62 0.54 BNILDI_03580 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.37 BNILDI_21035 bioF 8-amino-7-oxononanoate synthase — —
Escherichia coli ECRC102 0.54 NIAGMN_13780 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.37 NIAGMN_04440 bioF 8-amino-7-oxononanoate synthase — —
Escherichia coli ECRC98 0.54 JDDGAC_19650 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.37 JDDGAC_10030 bioF 8-amino-7-oxononanoate synthase — —
Escherichia coli BL21 0.54 ECD_03403 glyoxylate/hydroxypyruvate reductase B 0.36 ECD_00743 8-amino-7-oxononanoate synthase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_00153 Glyoxylate/hydroxypyruvate reductase B 0.36 OHPLBJKB_02937 8-amino-7-oxononanoate synthase low > 73
Escherichia coli BW25113 0.54 b3553 yiaE putative dehydrogenase (VIMSS) 0.36 b0776 bioF 8-amino-7-oxononanoate synthase (NCBI) low > 76
Enterobacter asburiae PDN3 0.52 EX28DRAFT_3817 Lactate dehydrogenase and related dehydrogenases 0.39 EX28DRAFT_2215 8-amino-7-oxononanoate synthase low > 76
Rahnella sp. WP5 0.52 EX31_RS05925 glyoxylate/hydroxypyruvate reductase GhrB 0.36 EX31_RS23700 8-amino-7-oxononanoate synthase low > 89
Serratia liquefaciens MT49 0.52 IAI46_00085 glyoxylate/hydroxypyruvate reductase GhrB 0.36 IAI46_06530 8-amino-7-oxononanoate synthase low > 86
Pectobacterium carotovorum WPP14 0.51 HER17_RS21175 glyoxylate/hydroxypyruvate reductase GhrB 0.38 HER17_RS13455 8-amino-7-oxononanoate synthase low > 75
Pantoea sp. MT58 0.51 IAI47_00110 glyoxylate/hydroxypyruvate reductase GhrB 0.33 IAI47_13525 8-amino-7-oxononanoate synthase low > 76
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS07265 D-glycerate dehydrogenase 0.35 QEN71_RS01095 8-amino-7-oxononanoate synthase — —
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS09030 NAD(P)-dependent oxidoreductase 0.34 ABZR87_RS12340 8-amino-7-oxononanoate synthase low > 80
Dickeya dianthicola 67-19 0.49 HGI48_RS00175 glyoxylate/hydroxypyruvate reductase GhrB 0.39 HGI48_RS08680 8-amino-7-oxononanoate synthase low > 71
Dickeya dianthicola ME23 0.49 DZA65_RS00195 glyoxylate/hydroxypyruvate reductase GhrB 0.39 DZA65_RS08970 8-amino-7-oxononanoate synthase low > 75
Castellaniella sp019104865 MT123 0.47 ABCV34_RS08615 D-glycerate dehydrogenase 0.30 ABCV34_RS15295 8-amino-7-oxononanoate synthase low > 48
Dickeya dadantii 3937 0.46 DDA3937_RS21080 glyoxylate/hydroxypyruvate reductase GhrB 0.39 DDA3937_RS08515 8-amino-7-oxononanoate synthase low > 74
Variovorax sp. SCN45 0.46 GFF2715 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.32 GFF144 8-amino-7-oxononanoate synthase (EC 2.3.1.47) low > 127
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS09465 bifunctional glyoxylate/hydroxypyruvate reductase B 0.34 RR42_RS10140 8-amino-7-oxononanoate synthase low > 128
Variovorax sp. OAS795 0.43 ABID97_RS20025 D-glycerate dehydrogenase 0.34 ABID97_RS16260 8-amino-7-oxononanoate synthase low > 91
Ralstonia solanacearum GMI1000 0.41 RS_RS21645 D-glycerate dehydrogenase 0.34 RS_RS07435 8-amino-7-oxononanoate synthase low > 80
Ralstonia solanacearum PSI07 0.41 RPSI07_RS02805 D-glycerate dehydrogenase 0.34 RPSI07_RS16700 8-amino-7-oxononanoate synthase low > 81
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF3835 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 0.36 GFF3995 8-amino-7-oxononanoate synthase (EC 2.3.1.47) low > 90
Acidovorax sp. GW101-3H11 0.38 Ac3H11_2599 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 0.36 Ac3H11_3830 8-amino-7-oxononanoate synthase (EC 2.3.1.47) low > 79
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS14340 D-glycerate dehydrogenase 0.34 RALBFv3_RS00820 8-amino-7-oxononanoate synthase low > 76
Ralstonia solanacearum UW163 0.33 UW163_RS11805 D-glycerate dehydrogenase 0.34 UW163_RS14155 8-amino-7-oxononanoate synthase — —
Rhizobium sp. OAE497 0.32 ABIE40_RS14685 D-glycerate dehydrogenase 0.30 ABIE40_RS12730 glycine C-acetyltransferase low > 107
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS12365 D-glycerate dehydrogenase 0.28 A4249_RS02505 glycine C-acetyltransferase low > 48
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS06255 2-hydroxyacid dehydrogenase family protein 0.31 HMPREF1078_RS16170 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme — —
Dinoroseobacter shibae DFL-12 0.29 Dshi_2643 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding (RefSeq) 0.25 Dshi_3546 5-aminolevulinic acid synthase (RefSeq) low > 64
Rhodospirillum rubrum S1H 0.27 Rru_A1815 Glycolate reductase (NCBI) 0.23 Rru_A1146 5-aminolevulinic acid synthase (NCBI) low > 58

Not shown: 0 genomes with orthologs for PS417_12555 only; 49 genomes with orthologs for PS417_26000 only