Conservation of cofitness between PS417_08300 and PS417_25840 in Pseudomonas simiae WCS417

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_08300 histidine kinase 1.0 PS417_25840 SpoVR family protein 0.20 12
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS08240 sensor histidine kinase KdpD 1.00 PFLU_RS27495 SpoVR family protein 0.40 2
Pseudomonas fluorescens SBW25 0.93 PFLU_RS08240 sensor histidine kinase KdpD 1.00 PFLU_RS27495 SpoVR family protein low > 109
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_2204 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 0.93 PfGW456L13_1194 FIG004684: SpoVR-like protein low > 87
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_312 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 0.93 Pf1N1B4_2521 FIG004684: SpoVR-like protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_18930 histidine kinase 0.92 AO353_07345 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 101
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_03300 histidine kinase 0.94 AO356_14305 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 104
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_2491 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 0.92 Pf6N2E2_4799 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 103
Pseudomonas sp. RS175 0.84 PFR28_00942 Sensor protein KdpD 0.95 PFR28_04070 hypothetical protein low > 88
Pseudomonas syringae pv. syringae B728a 0.82 Psyr_2050 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Osmosensitive K+ channel His kinase sensor:UspA 0.92 Psyr_4633 SpoVR low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.82 Psyr_2050 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Osmosensitive K+ channel His kinase sensor:UspA 0.92 Psyr_4633 SpoVR low > 86
Pseudomonas putida KT2440 0.78 PP_4158 sensor protein 0.86 PP_0395 putative type IV piliation protein 0.36 3
Pseudomonas sp. S08-1 0.70 OH686_01890 Osmosensitive K+ channel histidine kinase KdpD 0.87 OH686_15010 SpoVR-like protein low > 80
Azospirillum brasilense Sp245 0.37 AZOBR_RS23975 histidine kinase 0.49 AZOBR_RS12645 SpoVR family protein low > 97
Magnetospirillum magneticum AMB-1 0.35 AMB_RS09655 sensor histidine kinase KdpD 0.50 AMB_RS10895 SpoVR family protein low > 64
Azospirillum sp. SherDot2 0.34 MPMX19_03748 Sensor protein KdpD 0.47 MPMX19_02155 hypothetical protein low > 112
Rhizobium sp. OAE497 0.33 ABIE40_RS24610 sensor histidine kinase KdpD 0.47 ABIE40_RS12540 SpoVR family protein low > 107
Paraburkholderia sabiae LMG 24235 0.30 QEN71_RS24345 DUF4118 domain-containing protein 0.65 QEN71_RS07385 SpoVR family protein low > 153
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS00495 histidine kinase 0.67 RR42_RS36475 SpoVR family protein low > 128
Dickeya dianthicola 67-19 0.29 HGI48_RS06415 two-component system sensor histidine kinase KdpD 0.67 HGI48_RS11200 SpoVR family protein low > 71
Escherichia coli ECOR38 0.29 HEPCGN_01160 kdpD two-component system sensor histidine kinase KdpD 0.66 HEPCGN_24745 ycgB SpoVR family protein low > 87
Escherichia fergusonii Becca 0.29 EFB2_03401 Sensor protein KdpD 0.67 EFB2_02744 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.29 ECOLIN_RS03755 two-component system sensor histidine kinase KdpD 0.67 ECOLIN_RS07180 SpoVR family protein low > 55
Pectobacterium carotovorum WPP14 0.29 HER17_RS15045 two-component system sensor histidine kinase KdpD 0.68 HER17_RS11210 SpoVR family protein low > 75
Escherichia coli BW25113 0.29 b0695 kdpD fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein (NCBI) 0.66 b1188 ycgB ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Enterobacter asburiae PDN3 0.28 EX28DRAFT_2283 Osmosensitive K+ channel histidine kinase 0.67 EX28DRAFT_0765 Uncharacterized conserved protein low > 76
Serratia liquefaciens MT49 0.28 IAI46_06165 two-component system sensor histidine kinase KdbD 0.67 IAI46_14470 SpoVR family protein low > 86
Escherichia coli BL21 0.28 ECD_00652 fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein 0.66 ECD_01163 SpoVR family stationary phase protein low > 61
Enterobacter sp. TBS_079 0.28 MPMX20_01338 Sensor protein KdpD 0.67 MPMX20_02700 hypothetical protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF4607 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 0.67 GFF2805 FIG004684: SpoVR-like protein low > 78
Escherichia coli ECOR27 0.28 NOLOHH_23455 kdpD two-component system sensor histidine kinase KdpD 0.66 NOLOHH_20730 ycgB SpoVR family protein low > 75
Rahnella sp. WP5 0.28 EX31_RS23335 two-component system sensor histidine kinase KdbD 0.67 EX31_RS10500 SpoVR family protein low > 89
Dickeya dianthicola ME23 0.28 DZA65_RS06760 two-component system sensor histidine kinase KdbD 0.67 DZA65_RS11545 SpoVR family protein low > 75
Escherichia coli ECRC99 0.28 KEDOAH_20895 kdpD two-component system sensor histidine kinase KdpD 0.67 KEDOAH_25300 ycgB SpoVR family protein — —
Escherichia coli ECRC100 0.28 OKFHMN_07075 kdpD two-component system sensor histidine kinase KdpD 0.67 OKFHMN_28285 ycgB SpoVR family protein low > 80
Escherichia coli ECRC101 0.28 MCAODC_26290 kdpD two-component system sensor histidine kinase KdpD 0.67 MCAODC_21885 ycgB SpoVR family protein low > 87
Escherichia coli ECRC98 0.28 JDDGAC_10725 kdpD two-component system sensor histidine kinase KdpD 0.67 JDDGAC_06225 ycgB SpoVR family protein low > 86
Escherichia coli ECRC102 0.28 NIAGMN_05130 kdpD two-component system sensor histidine kinase KdpD 0.67 NIAGMN_27935 ycgB SpoVR family protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_03022 Sensor protein KdpD 0.66 OHPLBJKB_02501 hypothetical protein low > 73
Escherichia coli ECRC62 0.28 BNILDI_21460 kdpD two-component system sensor histidine kinase KdpD 0.66 BNILDI_18895 ycgB SpoVR family protein low > 75
Paraburkholderia bryophila 376MFSha3.1 0.28 H281DRAFT_04532 two-component system, OmpR family, sensor histidine kinase KdpD 0.65 H281DRAFT_05234 Stage V sporulation protein SpoVR/YcgB, involved in spore cortex formation low > 103
Acidovorax sp. GW101-3H11 0.28 Ac3H11_2408 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 0.63 Ac3H11_1147 FIG004684: SpoVR-like protein low > 79
Ralstonia sp. UNC404CL21Col 0.28 ABZR87_RS04525 sensor histidine kinase KdpD 0.65 ABZR87_RS14210 SpoVR family protein low > 80
Dickeya dadantii 3937 0.28 DDA3937_RS06370 two-component system sensor histidine kinase KdpD 0.68 DDA3937_RS11175 SpoVR family protein low > 74
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS18855 sensor protein KdpD 0.66 HSERO_RS21700 SpoVR family protein low > 78
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS06460 histidine kinase 0.65 BPHYT_RS11180 SpoVR family protein low > 109
Klebsiella michiganensis M5al 0.28 BWI76_RS08305 two-component sensor histidine kinase 0.67 BWI76_RS17740 SpoVR family protein low > 92
Sinorhizobium meliloti 1021 0.27 SMa2327 sensor protein 0.50 SMc01265 SpoVR family protein low > 103
Paraburkholderia graminis OAS925 0.27 ABIE53_001556 two-component system sensor histidine kinase KdpD 0.65 ABIE53_002316 stage V sporulation protein R low > 113
Pantoea sp. MT58 0.27 IAI47_01250 two-component system sensor histidine kinase KdbD 0.67 IAI47_08885 SpoVR family protein low > 76
Variovorax sp. SCN45 0.26 GFF3520 Osmosensitive K+ channel histidine kinase KdpD 0.65 GFF2935 FIG004684: SpoVR-like protein low > 127
Erwinia tracheiphila SCR3 0.26 LU632_RS00800 kdpD two-component system sensor histidine kinase KdpD 0.67 LU632_RS13075 SpoVR family protein low > 74

Not shown: 19 genomes with orthologs for PS417_08300 only; 11 genomes with orthologs for PS417_25840 only