Conservation of cofitness between PS417_09065 and PS417_25835 in Pseudomonas simiae WCS417

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_09065 short-chain dehydrogenase 1.0 PS417_25835 hypothetical protein 0.16 18
Pseudomonas fluorescens SBW25 0.98 PFLU_RS09120 SDR family oxidoreductase 1.00 PFLU_RS27490 YeaH/YhbH family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS09120 SDR family oxidoreductase 1.00 PFLU_RS27490 YeaH/YhbH family protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_5889 Short-chain dehydrogenase/reductase SDR 0.95 Pf6N2E2_4800 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) low > 103
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_01660 short-chain dehydrogenase 0.94 AO353_07340 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 101
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_512 Short-chain dehydrogenase/reductase SDR 0.95 Pf1N1B4_2522 FIG002076: hypothetical protein low > 87
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_2058 Short-chain dehydrogenase/reductase SDR 0.95 PfGW456L13_1195 FIG002076: hypothetical protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_19860 short-chain dehydrogenase 0.96 AO356_14310 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) low > 104
Pseudomonas sp. RS175 0.89 PFR28_03062 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase 0.95 PFR28_04069 hypothetical protein 0.35 37
Pseudomonas putida KT2440 0.87 PP_1817 Oxidoreductase, short-chain dehydrogenase/reductase family 0.89 PP_0396 conserved protein of unknown function low > 96
Pseudomonas stutzeri RCH2 0.85 Psest_1716 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.87 Psest_3673 Uncharacterized conserved protein low > 67
Pseudomonas sp. S08-1 0.81 OH686_00585 Oxidoreductase, short-chain dehydrogenase/reductase family 0.90 OH686_15015 UPF0229 protein YeaH low > 80
Azospirillum brasilense Sp245 0.46 AZOBR_RS28175 short-chain dehydrogenase 0.39 AZOBR_RS12650 hypothetical protein low > 97
Azospirillum sp. SherDot2 0.45 MPMX19_03169 Dihydroanticapsin 7-dehydrogenase 0.44 MPMX19_02156 hypothetical protein low > 112
Paraburkholderia graminis OAS925 0.45 ABIE53_005604 NAD(P)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) 0.55 ABIE53_002317 uncharacterized sporulation protein YeaH/YhbH (DUF444 family) low > 113
Enterobacter sp. TBS_079 0.43 MPMX20_02526 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase 0.57 MPMX20_01839 hypothetical protein low > 85
Pontibacter actiniarum KMM 6156, DSM 19842 0.41 CA264_03470 short-chain dehydrogenase 0.38 CA264_07095 hypothetical protein low > 74
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_06506 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 0.55 H281DRAFT_05233 hypothetical protein low > 103
Dickeya dianthicola 67-19 0.40 HGI48_RS13865 SDR family oxidoreductase 0.55 HGI48_RS10250 YeaH/YhbH family protein low > 71
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS32940 MFS transporter 0.53 BPHYT_RS11185 hypothetical protein low > 109
Sinorhizobium meliloti 1021 0.38 SMa0339 short chain alcohol dehydrogenase-related dehydrogenase 0.40 SMc01266 hypothetical protein low > 103
Alteromonas macleodii MIT1002 0.36 MIT1002_01748 Levodione reductase 0.60 MIT1002_01232 hypothetical protein low > 70
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS30200 SDR family oxidoreductase 0.53 QEN71_RS07380 YeaH/YhbH family protein low > 153
Rhizobium sp. OAE497 0.35 ABIE40_RS01520 SDR family oxidoreductase 0.39 ABIE40_RS12545 YeaH/YhbH family protein low > 107
Shewanella loihica PV-4 0.35 Shew_2863 short-chain dehydrogenase/reductase SDR (RefSeq) 0.56 Shew_1832 hypothetical protein (RefSeq) low > 60
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS24995 hypothetical protein 0.52 RR42_RS36480 hypothetical protein low > 128
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS16115 SDR family oxidoreductase 0.51 ABZR87_RS14215 YeaH/YhbH family protein low > 80
Variovorax sp. SCN45 0.33 GFF7388 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) 0.48 GFF2934 FIG002076: hypothetical protein low > 127
Shewanella sp. ANA-3 0.33 Shewana3_2690 short chain dehydrogenase (RefSeq) 0.53 Shewana3_1637 hypothetical protein (RefSeq) low > 73
Acidovorax sp. GW101-3H11 0.33 Ac3H11_493 toluenesulfonate zinc-independent alcohol dehydrogenase 0.49 Ac3H11_1146 FIG002076: hypothetical protein low > 79
Marinobacter adhaerens HP15 0.32 HP15_1707 short-chain dehydrogenase/reductase SDR 0.64 HP15_2934 protein YeaH low > 73
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS11255 3-ketoacyl-ACP reductase 0.54 HSERO_RS21695 hypothetical protein low > 78
Variovorax sp. OAS795 0.31 ABID97_RS18980 SDR family oxidoreductase 0.46 ABID97_RS10265 YeaH/YhbH family protein low > 91
Erwinia tracheiphila SCR3 0.30 LU632_RS23545 SDR family oxidoreductase 0.55 LU632_RS13015 YeaH/YhbH family protein low > 74
Serratia liquefaciens MT49 0.29 IAI46_10535 SDR family oxidoreductase 0.56 IAI46_14380 YeaH/YhbH family protein low > 86
Rahnella sp. WP5 0.26 EX31_RS02085 SDR family oxidoreductase 0.57 EX31_RS06255 YeaH/YhbH family protein low > 89
Escherichia fergusonii Becca 0.26 EFB2_01718 putative oxidoreductase YohF 0.56 EFB2_02210 hypothetical protein low > 86

Not shown: 22 genomes with orthologs for PS417_09065 only; 26 genomes with orthologs for PS417_25835 only