Conservation of cofitness between PS417_04290 and PS417_25315 in Pseudomonas simiae WCS417

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04290 hypothetical protein 1.0 PS417_25315 membrane protein 0.33 20
Pseudomonas fluorescens SBW25 0.96 PFLU_RS04345 ribosome-associated protein 0.89 PFLU_RS26950 outer membrane beta-barrel protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.96 PFLU_RS04345 ribosome-associated protein 0.89 PFLU_RS26950 outer membrane beta-barrel protein low > 109
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_5025 FIG138315: Putative alpha helix protein 0.78 PfGW456L13_1302 Outer membrane protein W precursor low > 87
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_1091 FIG138315: Putative alpha helix protein 0.75 Pf1N1B4_2639 Outer membrane protein W precursor low > 87
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_07090 hypothetical protein 0.75 AO356_14880 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_3279 FIG138315: Putative alpha helix protein 0.75 Pf6N2E2_4909 Outer membrane protein W precursor low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_4155 Protein of unknown function DUF615 0.51 Psyr_4473 OmpW low > 86
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_4155 Protein of unknown function DUF615 0.51 Psyr_4473 OmpW low > 86
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_05210 hypothetical protein 0.76 AO353_06765 hypothetical protein low > 101
Pseudomonas sp. RS175 0.89 PFR28_00162 hypothetical protein 0.76 PFR28_03959 Outer membrane protein W low > 88
Pseudomonas sp. S08-1 0.80 OH686_08575 UPF0307 protein YjgA 0.54 OH686_15635 Outer membrane protein W precursor low > 80
Pseudomonas putida KT2440 0.77 PP_0941 putative ribosome associated protein 0.44 PP_0504 Outer membrane protein OprG low > 96
Pseudomonas stutzeri RCH2 0.74 Psest_3319 Uncharacterized protein conserved in bacteria 0.56 Psest_3571 Outer membrane protein W low > 67
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_2073 Uncharacterized protein conserved in bacteria 0.28 B158DRAFT_2223 Outer membrane protein W low > 40
Pectobacterium carotovorum WPP14 0.36 HER17_RS20095 ribosome-associated protein 0.33 HER17_RS10950 outer membrane protein OmpW — —
Marinobacter adhaerens HP15 0.35 HP15_2448 protein belonging to uncharacterized protein family UPF0307 0.36 HP15_3604 outer membrane protein OmpW low > 73
Serratia liquefaciens MT49 0.34 IAI46_22590 ribosome-associated protein 0.36 IAI46_14055 outer membrane protein OmpW — —
Dickeya dadantii 3937 0.34 DDA3937_RS01495 ribosome-associated protein 0.34 DDA3937_RS10450 outer membrane protein OmpW low > 74
Enterobacter asburiae PDN3 0.34 EX28DRAFT_3421 Uncharacterized protein conserved in bacteria 0.35 EX28DRAFT_0927 Outer membrane protein W — —
Enterobacter sp. TBS_079 0.34 MPMX20_00516 hypothetical protein 0.34 MPMX20_02571 Outer membrane protein W — —
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.1884.1 FIG138315: Putative alpha helix protein 0.24 Xcc-8004.1234.1 Outer membrane protein W precursor — —
Dickeya dianthicola ME23 0.32 DZA65_RS01475 ribosome-associated protein 0.34 DZA65_RS10930 outer membrane protein OmpW — —
Dickeya dianthicola 67-19 0.32 HGI48_RS01410 ribosome-associated protein 0.34 HGI48_RS10450 outer membrane protein OmpW low > 71
Pantoea sp. MT58 0.32 IAI47_02760 ribosome-associated protein 0.36 IAI47_09155 outer membrane protein OmpW — —
Klebsiella michiganensis M5al 0.32 BWI76_RS02845 hypothetical protein 0.36 BWI76_RS11810 outer membrane protein OmpW — —
Escherichia coli ECOR38 0.32 HEPCGN_10130 yjgA ribosome-associated protein 0.36 HEPCGN_25160 ompW outer membrane protein OmpW low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF903 FIG138315: Putative alpha helix protein 0.33 GFF2731 Outer membrane protein W precursor — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_03801 hypothetical protein 0.36 OHPLBJKB_02427 Outer membrane protein W low > 73
Escherichia coli ECOR27 0.32 NOLOHH_04190 yjgA ribosome-associated protein 0.36 NOLOHH_20355 ompW outer membrane protein OmpW — —
Escherichia coli ECRC102 0.32 NIAGMN_09780 yjgA ribosome-associated protein 0.36 NIAGMN_27540 ompW outer membrane protein OmpW — —
Escherichia coli ECRC101 0.32 MCAODC_02435 yjgA ribosome-associated protein 0.36 MCAODC_21565 ompW outer membrane protein OmpW — —
Escherichia coli BL21 0.32 ECD_04102 ribosome-associated UPF0307 family protein 0.36 ECD_01230 outer membrane protein W low > 60
Escherichia coli ECRC98 0.32 JDDGAC_15570 yjgA ribosome-associated protein 0.36 JDDGAC_05880 ompW outer membrane protein OmpW — —
Escherichia coli ECRC101 0.32 OKFHMN_11930 yjgA ribosome-associated protein 0.36 OKFHMN_28695 ompW outer membrane protein OmpW — —
Escherichia coli ECRC99 0.32 KEDOAH_16225 yjgA ribosome-associated protein 0.36 KEDOAH_25690 ompW outer membrane protein OmpW — —
Escherichia coli BW25113 0.32 b4234 yjgA hypothetical protein (NCBI) 0.36 b1256 ompW outer membrane protein W (NCBI) low > 76
Escherichia coli ECRC62 0.32 BNILDI_07320 yjgA ribosome-associated protein 0.36 BNILDI_18500 ompW outer membrane protein OmpW — —
Escherichia coli Nissle 1917 0.32 ECOLIN_RS24565 ribosome biogenesis factor YjgA 0.36 ECOLIN_RS07580 outer membrane protein OmpW — —
Escherichia fergusonii Becca 0.32 EFB2_04299 hypothetical protein 0.36 EFB2_02669 Outer membrane protein W low > 86
Rahnella sp. WP5 0.31 EX31_RS12315 ribosome-associated protein 0.33 EX31_RS09990 outer membrane protein OmpW low > 89
Lysobacter sp. OAE881 0.30 ABIE51_RS06800 ribosome biogenesis factor YjgA 0.25 ABIE51_RS17100 OmpW family outer membrane protein low > 62
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS04265 ribosome biogenesis factor YjgA 0.20 QEN71_RS28020 OmpW family outer membrane protein low > 153
Castellaniella sp019104865 MT123 0.28 ABCV34_RS10615 ribosome biogenesis factor YjgA 0.28 ABCV34_RS01650 OmpW family outer membrane protein low > 48
Shewanella amazonensis SB2B 0.27 Sama_0481 hypothetical protein (RefSeq) 0.37 Sama_1371 outer membrane protein W (RefSeq) low > 62
Shewanella oneidensis MR-1 0.26 SO4079 conserved hypothetical protein (NCBI ptt file) 0.37 SO1673 outer membrane protein OmpW, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.25 Shewana3_3632 hypothetical protein (RefSeq) 0.37 Shewana3_2775 outer membrane protein W (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.24 MIT1002_00229 x96 protein 0.41 MIT1002_00027 Outer membrane protein W precursor low > 70
Acinetobacter radioresistens SK82 0.21 MPMX26_00549 hypothetical protein 0.18 MPMX26_00217 Outer membrane protein W low > 36
Shewanella loihica PV-4 0.20 Shew_0415 hypothetical protein (RefSeq) 0.37 Shew_2554 outer membrane protein W (RefSeq) low > 60

Not shown: 8 genomes with orthologs for PS417_04290 only; 21 genomes with orthologs for PS417_25315 only