Conservation of cofitness between GFF3254 and GFF4579 in Hydrogenophaga sp. GW460-11-11-14-LB1

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF3254 Ribonuclease PH (EC 2.7.7.56) 1.0 GFF4579 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.54 19
Variovorax sp. OAS795 0.82 ABID97_RS23640 ribonuclease PH 0.73 ABID97_RS15695 peptide-methionine (R)-S-oxide reductase MsrB low > 91
Variovorax sp. SCN45 0.81 GFF2381 Ribonuclease PH (EC 2.7.7.56) 0.73 GFF1329 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) low > 127
Acidovorax sp. GW101-3H11 0.80 Ac3H11_3670 Ribonuclease PH (EC 2.7.7.56) 0.79 Ac3H11_2535 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) low > 79
Burkholderia phytofirmans PsJN 0.74 BPHYT_RS15325 ribonuclease PH 0.58 BPHYT_RS09545 peptide methionine sulfoxide reductase low > 109
Ralstonia solanacearum PSI07 0.74 RPSI07_RS13840 ribonuclease PH 0.56 RPSI07_RS16290 peptide-methionine (R)-S-oxide reductase — —
Ralstonia solanacearum GMI1000 0.74 RS_RS10830 ribonuclease PH 0.56 RS_RS08825 peptide-methionine (R)-S-oxide reductase — —
Paraburkholderia graminis OAS925 0.74 ABIE53_003234 ribonuclease PH 0.58 ABIE53_002148 peptide-methionine (R)-S-oxide reductase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.74 H281DRAFT_04008 RNAse PH 0.57 H281DRAFT_00913 peptide-methionine (R)-S-oxide reductase low > 103
Cupriavidus basilensis FW507-4G11 0.73 RR42_RS04890 ribonuclease PH 0.53 RR42_RS11165 methionine sulfoxide reductase B low > 128
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS15255 ribonuclease PH 0.55 ABZR87_RS12635 peptide-methionine (R)-S-oxide reductase MsrB low > 80
Ralstonia solanacearum IBSBF1503 0.72 RALBFv3_RS03345 ribonuclease PH 0.57 RALBFv3_RS01185 peptide-methionine (R)-S-oxide reductase low > 76
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS10655 ribonuclease PH 0.50 HSERO_RS11215 methionine sulfoxide reductase B low > 78
Ralstonia solanacearum UW163 0.72 UW163_RS10375 ribonuclease PH 0.57 UW163_RS14495 peptide-methionine (R)-S-oxide reductase — —
Castellaniella sp019104865 MT123 0.67 ABCV34_RS03515 ribonuclease PH 0.51 ABCV34_RS08520 peptide-methionine (R)-S-oxide reductase MsrB low > 48
Acinetobacter radioresistens SK82 0.65 MPMX26_00040 Ribonuclease PH 0.47 MPMX26_01870 Peptide methionine sulfoxide reductase MsrB low > 36
Pseudomonas sp. S08-1 0.64 OH686_13570 ribonuclease PH 0.44 OH686_22580 Peptide-methionine (R)-S-oxide reductase MsrB low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF366 Ribonuclease PH (EC 2.7.7.56) 0.42 GFF3479 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) low > 78
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_0213 RNAse PH 0.54 Psyr_3614 Protein of unknown function DUF25 low > 86
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_0213 RNAse PH 0.54 Psyr_3614 Protein of unknown function DUF25 low > 86
Escherichia coli ECOR27 0.63 NOLOHH_07470 rph ribonuclease PH 0.41 NOLOHH_17265 msrB Peptide methionine sulfoxide reductase MsrB low > 57
Escherichia coli ECRC101 0.63 MCAODC_06100 rph ribonuclease PH 0.41 MCAODC_18675 msrB Peptide methionine sulfoxide reductase MsrB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_00059 Ribonuclease PH 0.41 OHPLBJKB_01954 Peptide methionine sulfoxide reductase MsrB low > 73
Escherichia coli ECRC102 0.63 NIAGMN_13350 rph ribonuclease PH 0.41 NIAGMN_01330 msrB Peptide methionine sulfoxide reductase MsrB — —
Escherichia coli Nissle 1917 0.63 ECOLIN_RS20755 ribonuclease PH 0.41 ECOLIN_RS09915 peptide-methionine (R)-S-oxide reductase MsrB — —
Escherichia coli ECRC99 0.63 KEDOAH_12555 rph ribonuclease PH 0.41 KEDOAH_01375 msrB Peptide methionine sulfoxide reductase MsrB — —
Escherichia coli ECRC98 0.63 JDDGAC_19215 rph ribonuclease PH 0.41 JDDGAC_01310 msrB Peptide methionine sulfoxide reductase MsrB — —
Escherichia coli BL21 0.63 ECD_03500 ribonuclease PH 0.41 ECD_01747 methionine sulfoxide reductase B low > 60
Escherichia coli ECOR38 0.63 HEPCGN_14410 rph ribonuclease PH 0.41 HEPCGN_05125 msrB Peptide methionine sulfoxide reductase MsrB low > 85
Escherichia coli ECRC62 0.63 BNILDI_04045 rph ribonuclease PH 0.41 BNILDI_16050 msrB Peptide methionine sulfoxide reductase MsrB — —
Escherichia coli ECRC101 0.63 OKFHMN_15590 rph ribonuclease PH 0.41 OKFHMN_26735 msrB Peptide methionine sulfoxide reductase MsrB — —
Pseudomonas stutzeri RCH2 0.63 Psest_3813 ribonuclease PH 0.48 Psest_1773 methionine-R-sulfoxide reductase low > 67
Escherichia fergusonii Becca 0.63 EFB2_00170 Ribonuclease PH 0.41 EFB2_02216 Peptide methionine sulfoxide reductase MsrB low > 86
Pseudomonas fluorescens SBW25 0.62 PFLU_RS29490 ribonuclease PH 0.52 PFLU_RS08515 peptide-methionine (R)-S-oxide reductase MsrB low > 109
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_4365 Ribonuclease PH (EC 2.7.7.56) 0.53 Pf6N2E2_2445 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) low > 103
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_2117 Ribonuclease PH (EC 2.7.7.56) 0.53 Pf1N1B4_260 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) low > 87
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS29490 ribonuclease PH 0.52 PFLU_RS08515 peptide-methionine (R)-S-oxide reductase MsrB low > 109
Pseudomonas simiae WCS417 0.62 PS417_27810 ribonuclease PH 0.52 PS417_08565 peptide methionine sulfoxide reductase low > 88
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_09260 ribonuclease PH 0.51 AO353_19155 peptide methionine sulfoxide reductase low > 101
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_784 Ribonuclease PH (EC 2.7.7.56) 0.52 PfGW456L13_2253 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) low > 87
Pseudomonas fluorescens FW300-N2C3 0.61 AO356_12500 ribonuclease PH 0.53 AO356_03085 peptide methionine sulfoxide reductase low > 104
Pseudomonas putida KT2440 0.61 PP_5294 Ribonuclease PH 0.53 PP_1873 Peptide methionine sulfoxide reductase MsrB low > 96
Pseudomonas sp. RS175 0.61 PFR28_04420 Ribonuclease PH 0.52 PFR28_00985 Peptide methionine sulfoxide reductase MsrB low > 88
Escherichia coli BW25113 0.61 b3643 rph ribonuclease PH (NCBI) 0.41 b1778 yeaA methionine sulfoxide reductase B (NCBI) low > 76
Sinorhizobium meliloti 1021 0.60 SMc01144 ribonuclease PH 0.48 SMc00117 hypothetical protein low > 103
Magnetospirillum magneticum AMB-1 0.59 AMB_RS22760 ribonuclease PH 0.53 AMB_RS20830 peptide-methionine (R)-S-oxide reductase low > 64
Rhizobium sp. OAE497 0.59 ABIE40_RS01640 ribonuclease PH 0.45 ABIE40_RS04980 peptide-methionine (R)-S-oxide reductase MsrB low > 107
Rhodopseudomonas palustris CGA009 0.56 TX73_001710 ribonuclease PH 0.51 TX73_021075 peptide-methionine (R)-S-oxide reductase MsrB low > 86

Not shown: 41 genomes with orthologs for GFF3254 only; 0 genomes with orthologs for GFF4579 only