Conservation of cofitness between GFF4727 and GFF4357 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4727 Manganese ABC transporter, periplasmic-binding protein SitA 1.0 GFF4357 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) 0.55 12
Klebsiella michiganensis M5al 0.82 BWI76_RS22425 metal ABC transporter substrate-binding protein 0.82 BWI76_RS06545 peptidylprolyl isomerase low > 92
Escherichia fergusonii Becca 0.77 EFB2_02776 putative periplasmic iron-binding protein 0.89 EFB2_03616 Peptidyl-prolyl cis-trans isomerase D low > 86
Escherichia coli Nissle 1917 0.77 ECOLIN_RS07000 iron/manganese ABC transporter substrate-binding protein SitA 0.89 ECOLIN_RS02645 peptidylprolyl isomerase
Escherichia coli ECOR27 0.77 NOLOHH_19565 sitA iron/manganese ABC transporter substrate-binding protein SitA 0.89 NOLOHH_01245 ppiD peptidylprolyl isomerase low > 75
Pantoea sp. MT58 0.76 IAI47_19055 metal ABC transporter substrate-binding protein 0.68 IAI47_14635 peptidylprolyl isomerase low > 76
Erwinia tracheiphila SCR3 0.73 LU632_RS14620 metal ABC transporter substrate-binding protein 0.68 LU632_RS18325 ppiD peptidylprolyl isomerase low > 74
Sinorhizobium meliloti 1021 0.68 SMc02509 iron-binding periplasmic ABC transporter protein 0.09 SMc00234 peptidyl-prolyl cis-trans isomerase
Dickeya dianthicola 67-19 0.65 HGI48_RS07885 metal ABC transporter substrate-binding protein 0.58 HGI48_RS05705 peptidylprolyl isomerase low > 71
Dickeya dianthicola ME23 0.65 DZA65_RS08475 metal ABC transporter substrate-binding protein 0.58 DZA65_RS06030 peptidylprolyl isomerase low > 75
Dickeya dadantii 3937 0.65 DDA3937_RS08155 metal ABC transporter substrate-binding protein 0.59 DDA3937_RS05660 peptidylprolyl isomerase low > 74
Rahnella sp. WP5 0.64 EX31_RS01080 metal ABC transporter substrate-binding protein 0.56 EX31_RS22265 peptidylprolyl isomerase low > 89
Pectobacterium carotovorum WPP14 0.63 HER17_RS11365 metal ABC transporter substrate-binding protein 0.58 HER17_RS15830 peptidylprolyl isomerase low > 75
Agrobacterium fabrum C58 0.62 Atu4471 ABC transporter substrate-binding protein 0.10 Atu1686 peptidyl-prolyl cis-trans isomerse D low > 89
Rhodospirillum rubrum S1H 0.61 Rru_A2895 Twin-arginine translocation pathway signal (NCBI) 0.11 Rru_A1890 hypothetical protein (NCBI) low > 58
Serratia liquefaciens MT49 0.61 IAI46_10890 metal ABC transporter substrate-binding protein 0.57 IAI46_05030 peptidylprolyl isomerase low > 86
Dinoroseobacter shibae DFL-12 0.61 Dshi_1659 periplasmic solute binding protein (RefSeq) 0.09 Dshi_1795 putative peptidyl-prolyl cis-trans isomerse D (RefSeq)
Bosea sp. OAE506 0.60 ABIE41_RS08355 metal ABC transporter substrate-binding protein 0.09 ABIE41_RS15735 SurA N-terminal domain-containing protein low > 77
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_2368 Periplasmic solute binding protein 0.17 Psyr_1751 PpiC-type peptidyl-prolyl cis-trans isomerase low > 86
Azospirillum sp. SherDot2 0.29 MPMX19_06935 putative periplasmic iron-binding protein 0.12 MPMX19_00894 Peptidyl-prolyl cis-trans isomerase D
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_2368 Periplasmic solute binding protein 0.17 Psyr_1751 PpiC-type peptidyl-prolyl cis-trans isomerase low > 86
Rhodopseudomonas palustris CGA009 0.28 TX73_004435 metal ABC transporter substrate-binding protein 0.10 TX73_014975 SurA N-terminal domain-containing protein low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF5751 Zinc ABC transporter, periplasmic-binding protein ZnuA 0.13 GFF3854 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) low > 90
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_10140 metal ABC transporter substrate-binding protein 0.18 AO353_20200 peptidylprolyl isomerase low > 101
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_11920 metal ABC transporter substrate-binding protein 0.19 AO356_01725 peptidylprolyl isomerase
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_4259 Zinc ABC transporter, periplasmic-binding protein ZnuA 0.18 Pf6N2E2_2214 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8)
Herbaspirillum seropedicae SmR1 0.27 HSERO_RS15870 metal ABC transporter substrate-binding protein 0.15 HSERO_RS11155 peptidyl-prolyl cis-trans isomerase low > 78
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_1987 Zinc ABC transporter, periplasmic-binding protein ZnuA 0.18 Pf1N1B4_3949 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8)
Pseudomonas sp. RS175 0.27 PFR28_04537 Manganese-binding lipoprotein MntA 0.19 PFR28_01231 Peptidyl-prolyl cis-trans isomerase D low > 88
Pseudomonas fluorescens SBW25 0.26 PFLU_RS29985 metal ABC transporter substrate-binding protein 0.18 PFLU_RS19150 peptidyl-prolyl cis-trans isomerase
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS29985 metal ABC transporter substrate-binding protein 0.18 PFLU_RS19150 peptidyl-prolyl cis-trans isomerase
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_708 Zinc ABC transporter, periplasmic-binding protein ZnuA 0.18 PfGW456L13_2556 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) low > 87
Pseudomonas simiae WCS417 0.26 PS417_28320 metal ABC transporter substrate-binding protein 0.17 PS417_17215 peptidylprolyl isomerase low > 88
Pseudomonas stutzeri RCH2 0.25 Psest_1207 ABC-type metal ion transport system, periplasmic component/surface adhesin 0.18 Psest_2283 Parvulin-like peptidyl-prolyl isomerase
Rhizobium sp. OAE497 0.25 ABIE40_RS04145 zinc ABC transporter substrate-binding protein 0.10 ABIE40_RS09540 peptidylprolyl isomerase low > 107
Castellaniella sp019104865 MT123 0.24 ABCV34_RS13450 zinc ABC transporter substrate-binding protein 0.14 ABCV34_RS03085 SurA N-terminal domain-containing protein
Enterobacter asburiae PDN3 0.23 EX28DRAFT_2787 ABC-type metal ion transport system, periplasmic component/surface adhesin 0.84 EX28DRAFT_2529 Parvulin-like peptidyl-prolyl isomerase 0.55 42
Enterobacter sp. TBS_079 0.23 MPMX20_03582 Manganese-binding lipoprotein MntA 0.84 MPMX20_01032 Peptidyl-prolyl cis-trans isomerase D low > 85
Phaeobacter inhibens DSM 17395 0.21 PGA1_c32780 manganese-binding lipoprotein MntA 0.08 PGA1_c16850 putative peptidyl-prolyl cis-trans isomerase D
Azospirillum brasilense Sp245 0.19 AZOBR_RS01030 manganese transporter 0.15 AZOBR_RS07495 peptidylprolyl isomerase low > 97
Pseudomonas putida KT2440 0.15 PP_3801 putative Cation ABC transporter, periplasmic cation-binding protein 0.18 PP_2304 putative Peptidyl-prolyl cis-trans isomerase D low > 96

Not shown: 7 genomes with orthologs for GFF4727 only; 47 genomes with orthologs for GFF4357 only