Conservation of cofitness between GFF2000 and GFF4258 in Hydrogenophaga sp. GW460-11-11-14-LB1

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF2000 Uracil permease 1.0 GFF4258 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) 0.58 7
Variovorax sp. SCN45 0.86 GFF3368 Pyrimidine permease 0.63 GFF1117 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) low > 127
Acidovorax sp. GW101-3H11 0.83 Ac3H11_4891 Uracil permease 0.57 Ac3H11_479 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) 0.39 46
Variovorax sp. OAS795 0.81 ABID97_RS03010 solute carrier family 23 protein 0.62 ABID97_RS14735 methyltransferase domain-containing protein low > 91
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS18085 pyrimidine permease 0.51 HSERO_RS17115 methyltransferase type 11 — —
Paraburkholderia sabiae LMG 24235 0.70 QEN71_RS00925 solute carrier family 23 protein 0.49 QEN71_RS04755 class I SAM-dependent methyltransferase — —
Burkholderia phytofirmans PsJN 0.69 BPHYT_RS01995 pyrimidine permease 0.49 BPHYT_RS14215 SAM-dependent methyltransferase — —
Klebsiella michiganensis M5al 0.69 BWI76_RS10750 pyrimidine utilization transport protein G 0.14 BWI76_RS05445 type 11 methyltransferase low > 92
Paraburkholderia graminis OAS925 0.69 ABIE53_000545 putative pyrimidine permease RutG 0.47 ABIE53_003008 SAM-dependent methyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.69 H281DRAFT_02126 uracil-xanthine permease 0.47 H281DRAFT_04398 Methylase involved in ubiquinone/menaquinone biosynthesis — —
Enterobacter sp. TBS_079 0.68 MPMX20_01693 Putative pyrimidine permease RutG 0.15 MPMX20_00898 hypothetical protein low > 85
Castellaniella sp019104865 MT123 0.64 ABCV34_RS15535 solute carrier family 23 protein 0.44 ABCV34_RS10480 methyltransferase domain-containing protein — —
Rahnella sp. WP5 0.64 EX31_RS24060 pyrimidine utilization transport protein G 0.15 EX31_RS21195 class I SAM-dependent methyltransferase 0.37 49
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS04530 pyrimidine permease 0.51 RR42_RS13575 SAM-dependent methyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF2172 Uracil permease 0.15 GFF4045 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) low > 78
Dickeya dadantii 3937 0.31 DDA3937_RS06035 uracil permease 0.17 DDA3937_RS16055 class I SAM-dependent methyltransferase low > 74
Erwinia tracheiphila SCR3 0.31 LU632_RS08290 uraA uracil permease 0.17 LU632_RS01085 class I SAM-dependent methyltransferase low > 74
Pseudomonas sp. S08-1 0.29 OH686_17980 Uracil permease or Uracil:proton symporter UraA 0.21 OH686_03575 SAM-dependent methyltransferase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_0968 Xanthine/uracil permease family 0.20 Psyr_1762 conserved hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_0968 Xanthine/uracil permease family 0.20 Psyr_1762 conserved hypothetical protein low > 86
Pseudomonas stutzeri RCH2 0.28 Psest_1119 uracil-xanthine permease 0.20 Psest_2072 Methyltransferase domain. low > 67
Marinobacter adhaerens HP15 0.28 HP15_2307 xanthine/uracil permease 0.20 HP15_1804 generic methyl-transferase low > 73
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_2933 Uracil permease 0.20 Pf1N1B4_4597 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) — —
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_1596 Uracil permease 0.20 PfGW456L13_3339 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) low > 87
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_14850 uracil transporter 0.21 AO353_23495 SAM-dependent methyltransferase low > 101
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS04480 uracil-xanthine permease 0.21 PFLU_RS12915 methyltransferase domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.27 PFLU_RS04480 uracil-xanthine permease 0.21 PFLU_RS12915 methyltransferase domain-containing protein low > 109
Pseudomonas simiae WCS417 0.27 PS417_04430 uracil transporter 0.21 PS417_12225 SAM-dependent methyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_5234 Uracil permease 0.20 Pf6N2E2_588 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) — —
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_16560 uracil transporter 0.20 AO356_24485 SAM-dependent methyltransferase low > 104
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_10810 uracil permease 0.21 CSW01_11390 class I SAM-dependent methyltransferase low > 62
Dechlorosoma suillum PS 0.26 Dsui_2332 uracil-xanthine permease 0.44 Dsui_2483 methylase involved in ubiquinone/menaquinone biosynthesis — —
Pseudomonas sp. RS175 0.26 PFR28_03642 Uracil permease 0.20 PFR28_01553 hypothetical protein low > 88

Not shown: 36 genomes with orthologs for GFF2000 only; 5 genomes with orthologs for GFF4258 only