Conservation of cofitness between PS417_08540 and PS417_21570 in Pseudomonas simiae WCS417

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_08540 RNA helicase 1.0 PS417_21570 flagellar basal body rod protein FlgB 0.52 11
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS08490 DEAD/DEAH box helicase 1.00 PFLU_RS23180 flagellar basal body rod protein FlgB low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS08490 DEAD/DEAH box helicase 1.00 PFLU_RS23180 flagellar basal body rod protein FlgB — —
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_265 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.92 Pf1N1B4_3472 Flagellar basal-body rod protein FlgB — —
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_03110 RNA helicase 0.92 AO356_18915 flagellar biosynthesis protein FlgB — —
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_2450 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.92 Pf6N2E2_5694 Flagellar basal-body rod protein FlgB — —
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_19130 RNA helicase 0.94 AO353_02860 flagellar biosynthesis protein FlgB — —
Pseudomonas sp. RS175 0.95 PFR28_00980 ATP-dependent RNA helicase DeaD 0.91 PFR28_03254 Flagellar basal body rod protein FlgB low > 88
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_2247 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.92 PfGW456L13_2001 Flagellar basal-body rod protein FlgB — —
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_3619 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal 0.82 Psyr_3481 Flagellar basal-body rod protein FlgB — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_3619 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal 0.82 Psyr_3481 Flagellar basal-body rod protein FlgB — —
Pseudomonas putida KT2440 0.90 PP_1868 ATP-dependent DEAD-box RNA helicase DeaD 0.81 PP_4391 flagellar basal-body rod protein FlgB — —
Pseudomonas stutzeri RCH2 0.84 Psest_1804 Superfamily II DNA and RNA helicases 0.75 Psest_2968 flagellar basal-body rod protein FlgB low > 67
Pseudomonas sp. S08-1 0.82 OH686_22545 DEAD-box ATP-dependent RNA helicase DeaD ( CshA) 0.68 OH686_02975 flagellar basal-body rod protein FlgB low > 80
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_09705 ATP-dependent RNA helicase 0.39 OKGIIK_02650 flgB flagellar basal body rod protein FlgB low > 52
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS02650 DEAD/DEAH box helicase 0.37 LRK54_RS13405 flagellar basal body rod protein FlgB low > 59
Rhodanobacter denitrificans MT42 0.46 LRK55_RS02405 DEAD/DEAH box helicase 0.37 LRK55_RS13145 flagellar basal body rod protein FlgB low > 63
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS08990 DEAD/DEAH box helicase 0.43 ABZR86_RS20075 flagellar basal body rod protein FlgB low > 74
Dechlorosoma suillum PS 0.44 Dsui_1351 DNA/RNA helicase, superfamily II 0.41 Dsui_1732 flagellar basal-body rod protein FlgB low > 51
Alteromonas macleodii MIT1002 0.43 MIT1002_00666 Cold-shock DEAD box protein A 0.37 MIT1002_01039 Putative proximal rod protein — —
Shewanella loihica PV-4 0.42 Shew_0531 DEAD/DEAH box helicase domain-containing protein (RefSeq) 0.46 Shew_1345 flgB flagellar basal body rod protein FlgB (RefSeq) — —
Shewanella amazonensis SB2B 0.42 Sama_0512 ATP-dependent RNA helicase DeaD (RefSeq) 0.44 Sama_2318 flgB flagellar basal body rod protein FlgB (RefSeq) low > 62
Rahnella sp. WP5 0.41 EX31_RS08510 DEAD/DEAH family ATP-dependent RNA helicase 0.43 EX31_RS11315 flagellar basal body rod protein FlgB low > 89
Pectobacterium carotovorum WPP14 0.41 HER17_RS18175 DEAD/DEAH family ATP-dependent RNA helicase 0.44 HER17_RS08165 flagellar basal body rod protein FlgB low > 75
Pantoea sp. MT58 0.41 IAI47_16990 DEAD/DEAH family ATP-dependent RNA helicase 0.45 IAI47_12165 flagellar basal body rod protein FlgB low > 76
Shewanella oneidensis MR-1 0.41 SO4034 deaD ATP-dependent RNA helicase DeaD (NCBI ptt file) 0.45 SO3250 flgB flagellar basal-body rod protein FlgB (NCBI ptt file) 0.38 59
Dickeya dianthicola 67-19 0.41 HGI48_RS03275 DEAD/DEAH family ATP-dependent RNA helicase 0.45 HGI48_RS13525 flagellar basal body rod protein FlgB low > 71
Erwinia tracheiphila SCR3 0.41 LU632_RS21030 DEAD/DEAH family ATP-dependent RNA helicase 0.42 LU632_RS10395 flgB flagellar basal body rod protein FlgB — —
Dickeya dianthicola ME23 0.41 DZA65_RS03270 DEAD/DEAH family ATP-dependent RNA helicase 0.45 DZA65_RS14010 flagellar basal body rod protein FlgB — —
Enterobacter sp. TBS_079 0.41 MPMX20_04066 ATP-dependent RNA helicase DeaD 0.45 MPMX20_01752 Flagellar basal body rod protein FlgB low > 85
Enterobacter asburiae PDN3 0.41 EX28DRAFT_3211 Superfamily II DNA and RNA helicases 0.45 EX28DRAFT_1859 flagellar basal-body rod protein FlgB — —
Serratia liquefaciens MT49 0.41 IAI46_01970 DEAD/DEAH family ATP-dependent RNA helicase 0.46 IAI46_15960 flagellar basal body rod protein FlgB low > 86
Dickeya dadantii 3937 0.40 DDA3937_RS03100 DEAD/DEAH family ATP-dependent RNA helicase 0.45 DDA3937_RS13480 flagellar basal body rod protein FlgB low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF1504 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.46 GFF3354 Flagellar basal-body rod protein FlgB low > 78
Shewanella sp. ANA-3 0.40 Shewana3_3595 DEAD/DEAH box helicase domain-containing protein (RefSeq) 0.45 Shewana3_1321 flgB flagellar basal body rod protein FlgB (RefSeq) — —
Escherichia fergusonii Becca 0.39 EFB2_00661 ATP-dependent RNA helicase DeaD 0.44 EFB2_02901 Flagellar basal body rod protein FlgB low > 86
Escherichia coli BL21 0.39 ECD_03029 ATP-dependent RNA helicase 0.43 ECD_01069 flagellar component of cell-proximal portion of basal-body rod low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_00538 ATP-dependent RNA helicase DeaD 0.43 OHPLBJKB_02592 Flagellar basal body rod protein FlgB low > 73
Escherichia coli ECOR27 0.39 NOLOHH_09955 deaD ATP-dependent RNA helicase DeaD 0.43 NOLOHH_21205 flgB flagellar basal body rod protein FlgB — —
Escherichia coli ECRC62 0.39 BNILDI_01580 deaD ATP-dependent RNA helicase DeaD 0.43 BNILDI_19365 flgB flagellar basal body rod protein FlgB — —
Escherichia coli BW25113 0.39 b3162 deaD inducible ATP-independent RNA helicase (VIMSS) 0.43 b1073 flgB flagellar basal-body rod protein B (NCBI) low > 76
Escherichia coli Nissle 1917 0.39 ECOLIN_RS18165 ATP-dependent RNA helicase DeaD 0.43 ECOLIN_RS06215 flagellar basal body rod protein FlgB — —
Escherichia coli ECRC101 0.39 OKFHMN_18155 deaD ATP-dependent RNA helicase DeaD 0.44 OKFHMN_03675 flgB flagellar basal body rod protein FlgB — —
Escherichia coli ECRC102 0.39 NIAGMN_15915 deaD ATP-dependent RNA helicase DeaD 0.44 NIAGMN_24155 flgB flagellar basal body rod protein FlgB — —
Escherichia coli ECRC101 0.39 MCAODC_08675 deaD ATP-dependent RNA helicase DeaD 0.44 MCAODC_23035 flgB flagellar basal body rod protein FlgB — —
Escherichia coli ECRC98 0.39 JDDGAC_21780 deaD ATP-dependent RNA helicase DeaD 0.44 JDDGAC_07335 flgB flagellar basal body rod protein FlgB — —
Escherichia coli ECRC99 0.39 KEDOAH_09995 deaD ATP-dependent RNA helicase DeaD 0.44 KEDOAH_24080 flgB flagellar basal body rod protein FlgB — —
Escherichia coli ECOR38 0.39 HEPCGN_17030 deaD ATP-dependent RNA helicase DeaD 0.43 HEPCGN_23815 flgB flagellar basal body rod protein FlgB low > 85
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_18185 DEAD/DEAH box family ATP-dependent RNA helicase 0.43 CSW01_11225 flagellar basal body rod protein FlgB low > 62

Not shown: 19 genomes with orthologs for PS417_08540 only; 20 genomes with orthologs for PS417_21570 only