Conservation of cofitness between Psest_2585 and Psest_3994 in Pseudomonas stutzeri RCH2

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2585 pseudouridylate synthase I 1.0 Psest_3994 Signal transduction histidine kinase 0.18 19
Pseudomonas sp. S08-1 0.74 OH686_04450 tRNA pseudouridine(38-40) synthase 0.78 OH686_11090 Osmolarity sensory histidine kinase EnvZ low > 80
Pseudomonas fluorescens FW300-N1B4 0.74 Pf1N1B4_7 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.78 Pf1N1B4_1773 Osmolarity sensory histidine kinase EnvZ — —
Pseudomonas sp. RS175 0.73 PFR28_02817 tRNA pseudouridine synthase A 0.77 PFR28_04869 Osmolarity sensor protein EnvZ low > 88
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_3941 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.76 PfGW456L13_426 Osmolarity sensory histidine kinase EnvZ low > 87
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_70 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.77 Pf6N2E2_3904 Osmolarity sensory histidine kinase EnvZ — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_1662 tRNA pseudouridine synthase 0.77 Psyr_0259 Osmolarity sensor protein envZ — —
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_1662 tRNA pseudouridine synthase 0.77 Psyr_0259 Osmolarity sensor protein envZ low > 86
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_20660 pseudouridine synthase 0.77 AO353_11750 ATPase low > 101
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_21435 pseudouridine synthase 0.77 AO356_10165 ATPase low > 104
Pseudomonas simiae WCS417 0.72 PS417_18565 pseudouridine synthase 0.78 PS417_01175 ATPase — —
Pseudomonas fluorescens SBW25 0.71 PFLU_RS20545 tRNA pseudouridine(38-40) synthase TruA 0.77 PFLU_RS01285 HAMP domain-containing protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS20545 tRNA pseudouridine(38-40) synthase TruA 0.77 PFLU_RS01285 HAMP domain-containing protein low > 109
Pseudomonas putida KT2440 0.70 PP_1994 tRNA pseudouridine (38-40)synthase 0.76 PP_0247 Osmolarity sensor protein EnvZ 0.27 65
Enterobacter sp. TBS_079 0.50 MPMX20_03253 tRNA pseudouridine synthase A 0.26 MPMX20_04291 Osmolarity sensor protein EnvZ low > 85
Enterobacter asburiae PDN3 0.49 EX28DRAFT_0286 tRNA pseudouridine(38-40) synthase 0.26 EX28DRAFT_4139 Signal transduction histidine kinase low > 76
Rahnella sp. WP5 0.49 EX31_RS19600 tRNA pseudouridine(38-40) synthase TruA 0.26 EX31_RS04795 two-component system sensor histidine kinase EnvZ low > 89
Escherichia fergusonii Becca 0.49 EFB2_01540 tRNA pseudouridine synthase A 0.26 EFB2_00424 Osmolarity sensor protein EnvZ low > 86
Escherichia coli BW25113 0.49 b2318 truA tRNA pseudouridine synthase A (NCBI) 0.26 b3404 envZ osmolarity sensor protein (NCBI) low > 76
Escherichia coli ECRC62 0.49 BNILDI_13225 truA tRNA pseudouridine(38-40) synthase TruA 0.26 BNILDI_02690 envZ two-component system sensor histidine kinase EnvZ — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF1934 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.26 GFF614 Osmolarity sensory histidine kinase EnvZ low > 78
Escherichia coli ECRC102 0.49 NIAGMN_20445 truA aspartate-semialdehyde dehydrogenase 0.26 NIAGMN_14810 envZ two-component system sensor histidine kinase EnvZ — —
Escherichia coli ECOR38 0.49 HEPCGN_21875 truA aspartate-semialdehyde dehydrogenase 0.26 HEPCGN_15850 envZ two-component system sensor histidine kinase EnvZ 0.83 72
Escherichia coli Nissle 1917 0.49 ECOLIN_RS13435 tRNA pseudouridine(38-40) synthase TruA 0.26 ECOLIN_RS19450 two-component system sensor histidine kinase EnvZ low > 52
Escherichia coli BL21 0.49 ECD_02243 tRNA pseudouridine(38-40) synthase 0.27 ECD_03256 sensory histidine kinase in two-component regulatory system with OmpR — —
Escherichia coli ECRC101 0.49 OKFHMN_22670 truA aspartate-semialdehyde dehydrogenase 0.26 OKFHMN_17040 envZ two-component system sensor histidine kinase EnvZ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_01387 tRNA pseudouridine synthase A 0.26 OHPLBJKB_00299 Osmolarity sensor protein EnvZ low > 73
Escherichia coli ECOR27 0.49 NOLOHH_14305 truA tRNA pseudouridine(38-40) synthase TruA 0.26 NOLOHH_08830 envZ two-component system sensor histidine kinase EnvZ low > 57
Escherichia coli ECRC98 0.49 JDDGAC_26630 truA aspartate-semialdehyde dehydrogenase 0.26 JDDGAC_20670 envZ two-component system sensor histidine kinase EnvZ — —
Escherichia coli ECRC101 0.49 MCAODC_13710 truA aspartate-semialdehyde dehydrogenase 0.26 MCAODC_07570 envZ two-component system sensor histidine kinase EnvZ — —
Escherichia coli ECRC99 0.49 KEDOAH_05525 truA aspartate-semialdehyde dehydrogenase 0.26 KEDOAH_11100 envZ two-component system sensor histidine kinase EnvZ — —
Klebsiella michiganensis M5al 0.49 BWI76_RS20380 tRNA pseudouridine(38-40) synthase TruA 0.27 BWI76_RS26670 two-component sensor histidine kinase low > 92
Serratia liquefaciens MT49 0.49 IAI46_17840 tRNA pseudouridine(38-40) synthase TruA 0.25 IAI46_23785 two-component system sensor histidine kinase EnvZ low > 86
Pectobacterium carotovorum WPP14 0.48 HER17_RS06990 tRNA pseudouridine(38-40) synthase TruA 0.25 HER17_RS01705 two-component system sensor histidine kinase EnvZ low > 75
Shewanella sp. ANA-3 0.48 Shewana3_1479 truA tRNA pseudouridine synthase A (RefSeq) 0.27 Shewana3_4018 envZ osmolarity sensor protein (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.48 LU632_RS07825 truA tRNA pseudouridine(38-40) synthase TruA 0.23 LU632_RS22935 envZ two-component system sensor histidine kinase EnvZ — —
Alteromonas macleodii MIT1002 0.48 MIT1002_02529 tRNA pseudouridine synthase A 0.27 MIT1002_03969 Osmolarity sensor protein EnvZ 0.82 53
Shewanella amazonensis SB2B 0.47 Sama_2150 truA tRNA pseudouridine synthase A (RefSeq) 0.26 Sama_3511 envZ osmolarity sensor protein (RefSeq) low > 62
Dickeya dianthicola ME23 0.47 DZA65_RS15370 tRNA pseudouridine(38-40) synthase TruA 0.26 DZA65_RS20835 two-component system sensor histidine kinase EnvZ low > 75
Pantoea sp. MT58 0.47 IAI47_06245 tRNA pseudouridine(38-40) synthase TruA 0.26 IAI47_01825 two-component system sensor histidine kinase EnvZ low > 76
Dickeya dadantii 3937 0.47 DDA3937_RS14465 tRNA pseudouridine(38-40) synthase TruA 0.26 DDA3937_RS19615 two-component system sensor histidine kinase EnvZ low > 74
Dickeya dianthicola 67-19 0.47 HGI48_RS14435 tRNA pseudouridine(38-40) synthase TruA 0.26 HGI48_RS19745 two-component system sensor histidine kinase EnvZ low > 71
Shewanella loihica PV-4 0.46 Shew_2306 tRNA pseudouridine synthase A (RefSeq) 0.27 Shew_3638 envZ osmolarity sensor protein (RefSeq) — —
Acinetobacter radioresistens SK82 0.46 MPMX26_00352 tRNA pseudouridine synthase A 0.29 MPMX26_02839 Osmolarity sensor protein EnvZ low > 36
Paraburkholderia graminis OAS925 0.43 ABIE53_004807 tRNA pseudouridine38-40 synthase 0.24 ABIE53_004378 two-component system osmolarity sensor histidine kinase EnvZ low > 113
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_06069 tRNA pseudouridine38-40 synthase 0.19 H281DRAFT_01391 two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ low > 103
Dechlorosoma suillum PS 0.41 Dsui_3194 pseudouridylate synthase I 0.22 Dsui_2400 signal transduction histidine kinase low > 51
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS33885 tRNA pseudouridine synthase A 0.20 BPHYT_RS28995 histidine kinase low > 109
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS17635 tRNA pseudouridine(38-40) synthase TruA 0.19 QEN71_RS25990 ATP-binding protein low > 153
Variovorax sp. SCN45 0.38 GFF3885 tRNA pseudouridine(38-40) synthase (EC 5.4.99.12) 0.18 GFF409 Osmolarity sensory histidine kinase EnvZ low > 127
Acidovorax sp. GW101-3H11 0.37 Ac3H11_1532 tRNA pseudouridine synthase A (EC 4.2.1.70) 0.19 Ac3H11_4390 integral membrane sensor signal transduction histidine kinase low > 79
Variovorax sp. OAS795 0.36 ABID97_RS08440 tRNA pseudouridine(38-40) synthase TruA 0.18 ABID97_RS17270 ATP-binding protein low > 91

Not shown: 49 genomes with orthologs for Psest_2585 only; 1 genomes with orthologs for Psest_3994 only