Conservation of cofitness between PS417_27585 and PS417_18540 in Pseudomonas simiae WCS417

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_27585 diaminopimelate epimerase 1.0 PS417_18540 colicin V production CvpA 0.35 2
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS29270 diaminopimelate epimerase 1.00 PFLU_RS20520 colicin V production protein CvpA — —
Pseudomonas fluorescens SBW25 0.93 PFLU_RS29270 diaminopimelate epimerase 1.00 PFLU_RS20520 colicin V production protein CvpA low > 109
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_2173 Diaminopimelate epimerase (EC 5.1.1.7) 0.87 Pf1N1B4_1 Colicin V production protein 0.25 45
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_844 Diaminopimelate epimerase (EC 5.1.1.7) 0.92 PfGW456L13_3936 Colicin V production protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_09040 diaminopimelate epimerase 0.93 AO353_20685 colicin V production CvpA low > 101
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_4418 Diaminopimelate epimerase (EC 5.1.1.7) 0.89 Pf6N2E2_75 Colicin V production protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_12735 diaminopimelate epimerase 0.89 AO356_21460 colicin V production CvpA low > 104
Pseudomonas sp. RS175 0.88 PFR28_04376 Diaminopimelate epimerase 0.81 PFR28_02812 hypothetical protein — —
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_0183 diaminopimelate epimerase 0.80 Psyr_1667 Colicin V production protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_0183 diaminopimelate epimerase 0.80 Psyr_1667 Colicin V production protein — —
Pseudomonas stutzeri RCH2 0.81 Psest_3765 diaminopimelate epimerase 0.67 Psest_2580 Uncharacterized membrane protein, required for colicin V production — —
Pseudomonas sp. S08-1 0.81 OH686_13795 diaminopimelate epimerase 0.72 OH686_04425 Colicin V production protein — —
Pseudomonas putida KT2440 0.81 PP_5228 diaminopimelate epimerase 0.82 PP_1999 membrane protein required for colicin V production — —
Dickeya dianthicola ME23 0.58 DZA65_RS21100 diaminopimelate epimerase 0.34 DZA65_RS15340 colicin V production protein — —
Dickeya dianthicola 67-19 0.58 HGI48_RS20055 diaminopimelate epimerase 0.34 HGI48_RS14410 colicin V production protein — —
Rahnella sp. WP5 0.58 EX31_RS15155 diaminopimelate epimerase 0.34 EX31_RS19575 colicin V production protein low > 89
Enterobacter asburiae PDN3 0.58 EX28DRAFT_4478 diaminopimelate epimerase (EC 5.1.1.7) 0.34 EX28DRAFT_0291 Uncharacterized membrane protein, required for colicin V production low > 76
Escherichia coli BL21 0.58 ECD_03685 diaminopimelate epimerase 0.35 ECD_02238 colicin V production protein low > 60
Escherichia coli ECRC102 0.58 NIAGMN_12185 dapF diaminopimelate epimerase 0.34 NIAGMN_20480 cvpA colicin V production protein — —
Escherichia coli ECRC101 0.58 OKFHMN_14430 dapF diaminopimelate epimerase 0.34 OKFHMN_22710 cvpA colicin V production protein — —
Pectobacterium carotovorum WPP14 0.58 HER17_RS01340 diaminopimelate epimerase 0.34 HER17_RS07015 colicin V production protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_04241 Diaminopimelate epimerase 0.35 OHPLBJKB_01392 Colicin V production protein — —
Escherichia fergusonii Becca 0.58 EFB2_04828 Diaminopimelate epimerase 0.35 EFB2_01545 Colicin V production protein — —
Escherichia coli ECOR38 0.58 HEPCGN_13135 dapF diaminopimelate epimerase 0.35 HEPCGN_21905 cvpA colicin V production protein — —
Escherichia coli ECRC98 0.58 JDDGAC_18055 dapF diaminopimelate epimerase 0.34 JDDGAC_26670 cvpA colicin V production protein — —
Escherichia coli ECRC99 0.58 KEDOAH_13720 dapF diaminopimelate epimerase 0.34 KEDOAH_05485 cvpA colicin V production protein — —
Escherichia coli ECOR27 0.58 NOLOHH_06560 dapF diaminopimelate epimerase 0.35 NOLOHH_14330 cvpA colicin V production protein — —
Escherichia coli ECRC101 0.58 MCAODC_04935 dapF diaminopimelate epimerase 0.34 MCAODC_13750 cvpA colicin V production protein — —
Escherichia coli ECRC62 0.58 BNILDI_04975 dapF diaminopimelate epimerase 0.35 BNILDI_13250 cvpA colicin V production protein — —
Escherichia coli Nissle 1917 0.57 ECOLIN_RS21865 diaminopimelate epimerase 0.35 ECOLIN_RS13410 colicin V production protein — —
Enterobacter sp. TBS_079 0.57 MPMX20_04467 Diaminopimelate epimerase 0.34 MPMX20_03248 Colicin V production protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF237 Diaminopimelate epimerase (EC 5.1.1.7) 0.34 GFF1928 Colicin V production protein — —
Dickeya dadantii 3937 0.57 DDA3937_RS19900 diaminopimelate epimerase 0.33 DDA3937_RS14440 colicin V production protein — —
Serratia liquefaciens MT49 0.57 IAI46_00715 diaminopimelate epimerase 0.34 IAI46_17815 colicin V production protein — —
Shewanella sp. ANA-3 0.56 Shewana3_0391 dapF diaminopimelate epimerase (RefSeq) 0.34 Shewana3_1482 colicin V production protein (RefSeq) — —
Shewanella oneidensis MR-1 0.56 SO4308 dapF diaminopimelate epimerase (NCBI ptt file) 0.34 SO3065 colicin V production protein (NCBI ptt file) — —
Pantoea sp. MT58 0.56 IAI47_18410 diaminopimelate epimerase 0.33 IAI47_06270 colicin V production protein low > 76
Shewanella loihica PV-4 0.55 Shew_0323 dapF diaminopimelate epimerase (RefSeq) 0.36 Shew_2303 colicin V production protein (RefSeq) — —
Klebsiella michiganensis M5al 0.54 BWI76_RS01200 diaminopimelate epimerase 0.34 BWI76_RS20355 colicin V production protein 0.33 64
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS10065 diaminopimelate epimerase 0.22 RALBFv3_RS02555 colicin V biosynthesis protein — —
Ralstonia solanacearum UW163 0.54 UW163_RS03515 diaminopimelate epimerase 0.22 UW163_RS11170 colicin V biosynthesis protein — —
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS05580 diaminopimelate epimerase 0.20 ABZR87_RS14470 CvpA family protein low > 80
Ralstonia solanacearum PSI07 0.53 RPSI07_RS23305 diaminopimelate epimerase 0.21 RPSI07_RS14760 colicin V synthesis protein — —
Shewanella amazonensis SB2B 0.53 Sama_3249 dapF diaminopimelate epimerase (RefSeq) 0.34 Sama_2147 colicin V production protein (RefSeq) — —
Ralstonia solanacearum GMI1000 0.50 RS_RS00675 diaminopimelate epimerase 0.21 RS_RS09935 colicin V biosynthesis protein — —
Lysobacter sp. OAE881 0.37 ABIE51_RS03025 diaminopimelate epimerase 0.29 ABIE51_RS06175 CvpA family protein — —

Not shown: 43 genomes with orthologs for PS417_27585 only; 0 genomes with orthologs for PS417_18540 only