Conservation of cofitness between PS417_00245 and PS417_18540 in Pseudomonas simiae WCS417

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_00245 oligopeptidase A 1.0 PS417_18540 colicin V production CvpA 0.49 10
Pseudomonas fluorescens SBW25 0.99 PFLU_RS00240 oligopeptidase A 1.00 PFLU_RS20520 colicin V production protein CvpA low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS00240 oligopeptidase A 1.00 PFLU_RS20520 colicin V production protein CvpA low > 109
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) 0.87 Pf1N1B4_1 Colicin V production protein low > 87
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) 0.92 PfGW456L13_3936 Colicin V production protein low > 87
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) 0.89 Pf6N2E2_75 Colicin V production protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_11120 oligopeptidase A 0.89 AO356_21460 colicin V production CvpA low > 104
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_10775 oligopeptidase A 0.93 AO353_20685 colicin V production CvpA low > 101
Pseudomonas sp. RS175 0.92 PFR28_04699 Oligopeptidase A 0.81 PFR28_02812 hypothetical protein low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.80 Psyr_1667 Colicin V production protein low > 86
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.80 Psyr_1667 Colicin V production protein low > 86
Pseudomonas putida KT2440 0.90 PP_0096 oligopeptidase A 0.82 PP_1999 membrane protein required for colicin V production low > 96
Pseudomonas sp. S08-1 0.83 OH686_12360 Oligopeptidase A 0.72 OH686_04425 Colicin V production protein 0.55 52
Pseudomonas stutzeri RCH2 0.80 Psest_4320 Zn-dependent oligopeptidases 0.67 Psest_2580 Uncharacterized membrane protein, required for colicin V production low > 67
Shewanella sp. ANA-3 0.59 Shewana3_4051 oligopeptidase A (RefSeq) 0.34 Shewana3_1482 colicin V production protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.59 SO4699 prlC oligopeptidase A (NCBI ptt file) 0.34 SO3065 colicin V production protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.58 Shew_3657 oligopeptidase A (RefSeq) 0.36 Shew_2303 colicin V production protein (RefSeq) — —
Shewanella amazonensis SB2B 0.58 Sama_3546 oligopeptidase A (RefSeq) 0.34 Sama_2147 colicin V production protein (RefSeq) low > 62
Dickeya dadantii 3937 0.58 DDA3937_RS21265 oligopeptidase A 0.33 DDA3937_RS14440 colicin V production protein low > 74
Dickeya dianthicola ME23 0.57 DZA65_RS00035 oligopeptidase A 0.34 DZA65_RS15340 colicin V production protein 0.44 51
Dickeya dianthicola 67-19 0.57 HGI48_RS00045 oligopeptidase A 0.34 HGI48_RS14410 colicin V production protein low > 71
Klebsiella michiganensis M5al 0.57 BWI76_RS26610 oligopeptidase A 0.34 BWI76_RS20355 colicin V production protein low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF517 Oligopeptidase A (EC 3.4.24.70) 0.34 GFF1928 Colicin V production protein low > 78
Enterobacter asburiae PDN3 0.57 EX28DRAFT_4063 Zn-dependent oligopeptidases 0.34 EX28DRAFT_0291 Uncharacterized membrane protein, required for colicin V production low > 76
Escherichia coli BL21 0.57 ECD_03347 oligopeptidase A 0.35 ECD_02238 colicin V production protein low > 60
Escherichia coli ECRC62 0.57 BNILDI_03210 prlC oligopeptidase A 0.35 BNILDI_13250 cvpA colicin V production protein — —
Enterobacter sp. TBS_079 0.57 MPMX20_04397 Oligopeptidase A 0.34 MPMX20_03248 Colicin V production protein low > 85
Escherichia coli ECOR38 0.57 HEPCGN_15325 prlC oligopeptidase A 0.35 HEPCGN_21905 cvpA colicin V production protein low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_00205 Oligopeptidase A 0.35 OHPLBJKB_01392 Colicin V production protein low > 73
Escherichia coli ECOR27 0.57 NOLOHH_08350 prlC oligopeptidase A 0.35 NOLOHH_14330 cvpA colicin V production protein — —
Escherichia coli ECRC101 0.57 OKFHMN_16415 prlC oligopeptidase A 0.34 OKFHMN_22710 cvpA colicin V production protein — —
Escherichia fergusonii Becca 0.57 EFB2_00317 Oligopeptidase A 0.35 EFB2_01545 Colicin V production protein low > 86
Escherichia coli ECRC101 0.57 MCAODC_06930 prlC oligopeptidase A 0.34 MCAODC_13750 cvpA colicin V production protein — —
Escherichia coli ECRC98 0.57 JDDGAC_20045 prlC oligopeptidase A 0.34 JDDGAC_26670 cvpA colicin V production protein — —
Escherichia coli ECRC102 0.57 NIAGMN_14180 prlC oligopeptidase A 0.34 NIAGMN_20480 cvpA colicin V production protein — —
Escherichia coli ECRC99 0.57 KEDOAH_11730 prlC oligopeptidase A 0.34 KEDOAH_05485 cvpA colicin V production protein — —
Escherichia coli Nissle 1917 0.57 ECOLIN_RS19985 oligopeptidase A 0.35 ECOLIN_RS13410 colicin V production protein — —
Pantoea sp. MT58 0.56 IAI47_01345 oligopeptidase A 0.33 IAI47_06270 colicin V production protein low > 76
Serratia liquefaciens MT49 0.56 IAI46_24210 oligopeptidase A 0.34 IAI46_17815 colicin V production protein low > 86
Pectobacterium carotovorum WPP14 0.56 HER17_RS21300 oligopeptidase A 0.34 HER17_RS07015 colicin V production protein low > 75
Rahnella sp. WP5 0.56 EX31_RS05165 oligopeptidase A 0.34 EX31_RS19575 colicin V production protein 0.44 10
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS01690 oligopeptidase A 0.22 RALBFv3_RS02555 colicin V biosynthesis protein low > 76
Ralstonia solanacearum UW163 0.45 UW163_RS15000 oligopeptidase A 0.22 UW163_RS11170 colicin V biosynthesis protein — —
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS13490 M3 family metallopeptidase 0.20 ABZR87_RS14470 CvpA family protein low > 80
Ralstonia solanacearum GMI1000 0.45 RS_RS08035 oligopeptidase A 0.21 RS_RS09935 colicin V biosynthesis protein low > 80
Ralstonia solanacearum PSI07 0.44 RPSI07_RS15795 oligopeptidase A 0.21 RPSI07_RS14760 colicin V synthesis protein low > 81
Lysobacter sp. OAE881 0.21 ABIE51_RS09155 M3 family metallopeptidase 0.29 ABIE51_RS06175 CvpA family protein — —

Not shown: 45 genomes with orthologs for PS417_00245 only; 0 genomes with orthologs for PS417_18540 only