Conservation of cofitness between GFF3669 and GFF3567 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3669 Integration host factor beta subunit 1.0 GFF3567 Pyruvate kinase (EC 2.7.1.40) 0.86 12
Escherichia coli ECOR27 0.99 NOLOHH_22025 ihfB integration host factor subunit beta 0.96 NOLOHH_17810 pykF pyruvate kinase PykF — —
Escherichia coli ECRC102 0.99 NIAGMN_03185 ihfB integration host factor subunit beta 0.96 NIAGMN_00775 pykF pyruvate kinase PykF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_02756 Integration host factor subunit beta 0.96 OHPLBJKB_02048 Pyruvate kinase I — —
Escherichia coli ECRC100 0.99 OKFHMN_05465 ihfB integration host factor subunit beta 0.96 OKFHMN_27290 pykF pyruvate kinase PykF — —
Escherichia coli ECRC98 0.99 JDDGAC_09075 ihfB integration host factor subunit beta 0.96 JDDGAC_01865 pykF pyruvate kinase PykF — —
Escherichia coli ECRC99 0.99 KEDOAH_22270 ihfB integration host factor subunit beta 0.96 KEDOAH_00820 pykF pyruvate kinase PykF — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS04830 integration host factor subunit beta 0.96 ECOLIN_RS09375 pyruvate kinase PykF — —
Escherichia coli ECOR38 0.99 HEPCGN_23060 ihfB integration host factor subunit beta 0.96 HEPCGN_05675 pykF pyruvate kinase PykF — —
Escherichia coli BW25113 0.99 b0912 ihfB integration host factor subunit beta (NCBI) 0.96 b1676 pykF pyruvate kinase (NCBI) low > 76
Escherichia coli ECRC62 0.99 BNILDI_20280 ihfB integration host factor subunit beta 0.96 BNILDI_16600 pykF pyruvate kinase PykF — —
Escherichia coli BL21 0.99 ECD_00916 integration host factor (IHF), DNA-binding protein, beta subunit 0.96 ECD_01645 pyruvate kinase I — —
Escherichia coli ECRC101 0.99 MCAODC_24855 ihfB integration host factor subunit beta 0.96 MCAODC_18120 pykF pyruvate kinase PykF — —
Escherichia fergusonii Becca 0.99 EFB2_03152 Integration host factor subunit beta 0.96 EFB2_02316 Pyruvate kinase I — —
Klebsiella michiganensis M5al 0.98 BWI76_RS09785 integration host factor subunit beta 0.96 BWI76_RS16960 pyruvate kinase — —
Enterobacter sp. TBS_079 0.98 MPMX20_01570 Integration host factor subunit beta 0.97 MPMX20_01951 Pyruvate kinase I low > 85
Enterobacter asburiae PDN3 0.98 EX28DRAFT_2024 integration host factor, beta subunit 0.97 EX28DRAFT_1679 pyruvate kinase — —
Klebsiella pneumoniae MKP103 0.98 KDGMDA_17985 integration host factor subunit beta 0.97 KDGMDA_24130 pyruvate kinase PykF low > 95
Pantoea agglomerans CFBP13505 P0401 0.95 PagCFBP13505_RS04485 integration host factor subunit beta 0.88 PagCFBP13505_RS17750 pyruvate kinase PykF — —
Serratia liquefaciens MT49 0.95 IAI46_08655 integration host factor subunit beta 0.89 IAI46_11185 pyruvate kinase PykF — —
Pantoea sp. MT58 0.95 IAI47_12845 integration host factor subunit beta 0.88 IAI47_10840 pyruvate kinase PykF — —
Erwinia tracheiphila SCR3 0.94 LU632_RS09810 ihfB integration host factor subunit beta 0.87 LU632_RS11145 pykF pyruvate kinase PykF — —
Erwinia tracheiphila HP pepo 2.2 0.94 IJEDHG_20290 ihfB integration host factor subunit beta 0.87 IJEDHG_25210 pykF pyruvate kinase PykF — —
Pectobacterium carotovorum WPP14 0.94 HER17_RS12270 integration host factor subunit beta 0.86 HER17_RS08960 pyruvate kinase PykF — —
Erwinia amylovora T8 0.94 OLJFJH_16120 integration host factor subunit beta 0.87 OLJFJH_14555 pyruvate kinase PykF — —
Rahnella sp. WP5 0.94 EX31_RS18235 integration host factor subunit beta 0.89 EX31_RS13870 pyruvate kinase PykF — —
Dickeya dadantii 3937 0.92 DDA3937_RS09690 integration host factor subunit beta 0.87 DDA3937_RS12740 pyruvate kinase PykF — —
Dickeya dianthicola ME23 0.91 DZA65_RS10010 integration host factor subunit beta 0.86 DZA65_RS13270 pyruvate kinase PykF — —
Dickeya dianthicola 67-19 0.91 HGI48_RS09700 integration host factor subunit beta 0.86 HGI48_RS12805 pyruvate kinase PykF — —
Vibrio cholerae E7946 ATCC 55056 0.83 CSW01_09575 integration host factor subunit beta 0.77 CSW01_02575 pyruvate kinase PykF — —
Pseudomonas aeruginosa PA14 0.74 IKLFDK_16065 integration host factor subunit beta 0.31 IKLFDK_07135 pyruvate kinase — —
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_03435 integration host factor subunit beta 0.31 AO356_19600 pyruvate kinase low > 104
Pseudomonas sp. SVBP6 0.73 COO64_RS06725 ihfB integration host factor subunit beta 0.31 COO64_RS25865 pyk pyruvate kinase low > 93
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS08125 integration host factor subunit beta 0.31 PFLU_RS08850 pyruvate kinase low > 109
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_2515 Integration host factor beta subunit 0.30 Pf6N2E2_5835 Pyruvate kinase (EC 2.7.1.40) — —
Pseudomonas simiae WCS417 0.73 PS417_08155 integration host factor subunit beta 0.31 PS417_08790 pyruvate kinase low > 88
Pseudomonas fluorescens SBW25 0.73 PFLU_RS08125 integration host factor subunit beta 0.31 PFLU_RS08850 pyruvate kinase low > 109
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_2181 Integration host factor beta subunit 0.31 PfGW456L13_4299 Pyruvate kinase (EC 2.7.1.40) — —
Pseudomonas sp. DMC3 0.73 GFF4671 Integration host factor subunit beta 0.32 GFF2499 Pyruvate kinase low > 89
Pseudomonas sp. RS175 0.73 PFR28_00913 Integration host factor subunit beta 0.31 PFR28_03114 Pyruvate kinase low > 88
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_02040 integration host factor subunit beta 0.31 AO353_01940 pyruvate kinase low > 101
Pseudomonas putida KT2440 0.73 PP_1773 Integration host factor subunit beta 0.32 PP_4301 Pyruvate kinase — —
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_345 Integration host factor beta subunit 0.31 Pf1N1B4_3657 Pyruvate kinase (EC 2.7.1.40) low > 87
Bosea sp. OAE506 0.52 ABIE41_RS00295 integration host factor subunit beta 0.31 ABIE41_RS06285 pyruvate kinase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.51 A4249_RS10895 integration host factor subunit beta 0.26 A4249_RS02440 pyruvate kinase — —
Xanthobacter sp. DMC5 0.51 GFF1889 Integration host factor subunit beta 0.29 GFF1958 Pyruvate kinase — —
Caulobacter crescentus NA1000 0.51 CCNA_03701 integration host factor beta-subunit 0.28 CCNA_02130 pyruvate kinase low > 66
Caulobacter crescentus NA1000 Δfur 0.51 CCNA_03701 integration host factor beta-subunit 0.28 CCNA_02130 pyruvate kinase low > 67
Azospirillum brasilense Sp245 0.50 AZOBR_RS03110 integration host factor subunit beta 0.31 AZOBR_RS06845 pyruvate kinase low > 97
Azospirillum sp. SherDot2 0.50 MPMX19_02383 Integration host factor subunit beta 0.33 MPMX19_04074 Pyruvate kinase — —
Rhodospirillum rubrum S1H 0.49 Rru_A0292 Integration host factor, beta subunit (NCBI) 0.32 Rru_A2465 Pyruvate kinase (NCBI) — —
Sphingomonas koreensis DSMZ 15582 0.47 Ga0059261_3896 integration host factor, beta subunit 0.30 Ga0059261_0685 pyruvate kinase low > 68
Sphingobium sp. HT1-2 0.45 GFF1648 Integration host factor beta subunit 0.28 GFF487 Pyruvate kinase (EC 2.7.1.40) low > 95
Desulfovibrio vulgaris Miyazaki F 0.41 DvMF_0558 histone family protein DNA-binding protein (RefSeq) 0.28 DvMF_0965 pyruvate kinase (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.41 DVU1864 ihfB DNA-binding protein HU, beta subunit, putative (TIGR) 0.27 DVU2514 pyk pyruvate kinase (TIGR) — —
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS14170 HU family DNA-binding protein 0.34 HMPREF1078_RS04695 pyruvate kinase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.29 Echvi_1249 Bacterial nucleoid DNA-binding protein 0.35 Echvi_2317 pyruvate kinase — —

Not shown: 40 genomes with orthologs for GFF3669 only; 17 genomes with orthologs for GFF3567 only