Conservation of cofitness between Psest_0568 and Psest_3478 in Pseudomonas stutzeri RCH2

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0568 pseudouridine synthase 1.0 Psest_3478 Cytochrome B561 0.20 19
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_06330 pseudouridine synthase 0.51 AO353_20230 cytochrome B low > 101
Pseudomonas sp. RS175 0.83 PFR28_03839 Ribosomal large subunit pseudouridine synthase E 0.50 PFR28_01238 Cytochrome b561 low > 88
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_15455 pseudouridine synthase 0.50 AO356_01690 cytochrome B low > 104
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_1389 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) 0.49 PfGW456L13_2569 cytochrome b(561) low > 87
Pseudomonas fluorescens FW300-N1B4 0.82 Pf1N1B4_2722 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) 0.51 Pf1N1B4_3957 cytochrome b(561) low > 87
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_5028 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) 0.50 Pf6N2E2_2207 cytochrome b(561) low > 103
Pseudomonas putida KT2440 0.81 PP_4778 23S rRNA pseudouridine 2457 synthase 0.54 PP_2010 Cytochrome b561 low > 96
Pseudomonas fluorescens SBW25 0.81 PFLU_RS26510 pseudouridine synthase 0.52 PFLU_RS19085 cytochrome b low > 109
Pseudomonas fluorescens SBW25-INTG 0.81 PFLU_RS26510 pseudouridine synthase 0.52 PFLU_RS19085 cytochrome b low > 109
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_4336 ribosomal large subunit pseudouridine synthase E 0.26 Psyr_3279 Cytochrome B561, bacterial low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_4336 ribosomal large subunit pseudouridine synthase E 0.26 Psyr_3279 Cytochrome B561, bacterial low > 86
Pseudomonas simiae WCS417 0.80 PS417_24580 pseudouridine synthase 0.52 PS417_17155 cytochrome B561 low > 88
Pseudomonas sp. S08-1 0.78 OH686_08840 LSU rRNA pseudouridine(2457) synthase 0.69 OH686_18890 Cytochrome b561 0.50 44
Castellaniella sp019104865 MT123 0.71 ABCV34_RS13900 pseudouridine synthase 0.46 ABCV34_RS06055 cytochrome b low > 48
Azospirillum brasilense Sp245 0.62 AZOBR_RS03795 Pseudouridine synthase 0.27 AZOBR_RS21975 hypothetical protein low > 97
Azospirillum sp. SherDot2 0.58 MPMX19_00077 Ribosomal large subunit pseudouridine synthase E 0.19 MPMX19_00292 Cytochrome b561 low > 112
Klebsiella michiganensis M5al 0.56 BWI76_RS11325 23S rRNA pseudouridine synthase E 0.33 BWI76_RS13250 cytochrome b561 — —
Escherichia fergusonii Becca 0.55 EFB2_02840 Ribosomal large subunit pseudouridine synthase E 0.25 EFB2_02561 Cytochrome b561 low > 86
Variovorax sp. SCN45 0.54 GFF6670 LSU rRNA pseudouridine(2457) synthase (EC 5.4.99.20) 0.55 GFF6977 Cytochrome b561 low > 127
Enterobacter sp. TBS_079 0.54 MPMX20_01819 Ribosomal large subunit pseudouridine synthase E 0.34 MPMX20_02196 Cytochrome b561 low > 85
Enterobacter asburiae PDN3 0.54 EX28DRAFT_1795 pseudouridine synthase 0.35 EX28DRAFT_1349 Cytochrome B561 low > 76
Escherichia coli ECOR27 0.54 NOLOHH_20890 rluE 23S rRNA pseudouridine(2457) synthase RluE 0.37 NOLOHH_16170 yodB Cytochrome b561-like protein — —
Rahnella sp. WP5 0.54 EX31_RS24585 23S rRNA pseudouridine(2457) synthase RluE 0.36 EX31_RS00195 hydrogenase low > 89
Escherichia coli BW25113 0.54 b1135 ymfC orf, hypothetical protein (VIMSS) 0.37 b1974 yodB putative cytochrome (VIMSS) low > 76
Escherichia coli ECRC62 0.54 BNILDI_19055 rluE 23S rRNA pseudouridine(2457) synthase RluE 0.37 BNILDI_14960 yodB Cytochrome b561-like protein — —
Escherichia coli ECRC102 0.54 NIAGMN_24900 rluE 23S rRNA pseudouridine(2457) synthase RluE 0.36 NIAGMN_02515 yodB Cytochrome b561-like protein — —
Escherichia coli ECRC101 0.54 MCAODC_22330 rluE 23S rRNA pseudouridine(2457) synthase RluE 0.36 MCAODC_19855 yodB Cytochrome b561-like protein — —
Escherichia coli ECRC99 0.54 KEDOAH_24840 rluE 23S rRNA pseudouridine(2457) synthase RluE 0.36 KEDOAH_02555 yodB Cytochrome b561-like protein — —
Escherichia coli BL21 0.54 ECD_01133 23S rRNA pseudouridine(2457) synthase 0.37 ECD_01889 cytochrome b561-like protein low > 60
Escherichia coli ECRC101 0.54 OKFHMN_00755 rluE 23S rRNA pseudouridine(2457) synthase RluE 0.36 OKFHMN_25540 yodB Cytochrome b561-like protein — —
Escherichia coli ECRC98 0.54 JDDGAC_06610 rluE 23S rRNA pseudouridine(2457) synthase RluE 0.36 JDDGAC_00125 yodB Cytochrome b561-like protein — —
Escherichia coli ECOR38 0.54 HEPCGN_24230 rluE 23S rRNA pseudouridine(2457) synthase RluE 0.25 HEPCGN_26130 cybB cytochrome b561 low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF3421 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) 0.34 GFF3436 Cytochrome C553 (soluble cytochrome f) low > 78
Dickeya dianthicola ME23 0.54 DZA65_RS11855 23S rRNA pseudouridine(2457) synthase RluE 0.34 DZA65_RS17465 cytochrome b561 low > 75
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS09950 pseudouridine synthase 0.56 LRK54_RS14100 cytochrome b low > 59
Pantoea sp. MT58 0.54 IAI47_11905 23S rRNA pseudouridine(2457) synthase RluE 0.32 IAI47_19835 cytochrome b561 low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_02533 Ribosomal large subunit pseudouridine synthase E 0.37 OHPLBJKB_01755 Cytochrome b561 low > 73
Serratia liquefaciens MT49 0.53 IAI46_10455 23S rRNA pseudouridine(2457) synthase RluE 0.30 IAI46_18175 cytochrome b low > 86
Dickeya dianthicola 67-19 0.53 HGI48_RS11520 23S rRNA pseudouridine(2457) synthase RluE 0.33 HGI48_RS16370 cytochrome b561 low > 71
Rhodanobacter denitrificans MT42 0.53 LRK55_RS09590 pseudouridine synthase 0.56 LRK55_RS13820 cytochrome b low > 63
Dickeya dadantii 3937 0.53 DDA3937_RS11475 23S rRNA pseudouridine(2457) synthase RluE 0.29 DDA3937_RS16265 cytochrome b561 low > 74
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_04086 23S rRNA pseudouridine2457 synthase 0.29 H281DRAFT_04663 cytochrome b561 low > 103
Dinoroseobacter shibae DFL-12 0.52 Dshi_2908 pseudouridine synthase (RefSeq) 0.19 Dshi_4169 cytochrome B561 (RefSeq) — —
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS07010 pseudouridine synthase 0.32 HSERO_RS12180 cytochrome B561 low > 78
Pectobacterium carotovorum WPP14 0.52 HER17_RS11615 23S rRNA pseudouridine(2457) synthase RluE 0.35 HER17_RS17570 cytochrome b561 low > 75
Paraburkholderia graminis OAS925 0.51 ABIE53_003318 23S rRNA pseudouridine2457 synthase 0.29 ABIE53_000824 cytochrome b561 low > 113
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS15735 pseudouridine synthase 0.29 BPHYT_RS03445 cytochrome B561 low > 109
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS02975 pseudouridine synthase 0.27 QEN71_RS16665 cytochrome b low > 153
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_16200 Pseudouridine synthase 0.57 OKGIIK_00825 Cytochrome B low > 52

Not shown: 13 genomes with orthologs for Psest_0568 only; 5 genomes with orthologs for Psest_3478 only