Conservation of cofitness between PGA1_78p00280 and PGA1_c34320 in Phaeobacter inhibens DSM 17395

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_78p00280 putative sodium/alanine symporter 1.0 PGA1_c34320 L-threonine 3-dehydrogenase (EC 1.1.1.103) (from data) 0.18 13
Shewanella loihica PV-4 0.67 Shew_0424 amino acid carrier protein (RefSeq) 0.66 Shew_3710 tdh L-threonine 3-dehydrogenase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.62 Sama_3166 amino acid carrier protein (RefSeq) 0.65 Sama_0097 tdh L-threonine 3-dehydrogenase (RefSeq) low > 62
Pseudomonas stutzeri RCH2 0.62 Psest_2134 amino acid carrier protein 0.17 Psest_1428 Threonine dehydrogenase and related Zn-dependent dehydrogenases low > 67
Sinorhizobium meliloti 1021 0.61 SM_b20069 amino acid carrier protein 0.62 SMc01564 L-threonine 3-dehydrogenase low > 103
Castellaniella sp019104865 MT123 0.59 ABCV34_RS11085 sodium:alanine symporter family protein 0.61 ABCV34_RS14100 L-threonine 3-dehydrogenase low > 48
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_07125 sodium:alanine symporter family protein 0.62 CSW01_18565 L-threonine 3-dehydrogenase low > 62
Shewanella sp. ANA-3 0.46 Shewana3_3420 amino acid carrier protein (RefSeq) 0.64 Shewana3_4105 tdh L-threonine 3-dehydrogenase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.46 SO0858 sodium:alanine symporter family protein (NCBI ptt file) 0.64 SO4673 tdh threonine 3-dehydrogenase (NCBI ptt file) low > 76
Pontibacter actiniarum KMM 6156, DSM 19842 0.36 CA264_18025 sodium/alanine symporter 0.11 CA264_03425 glutathione-dependent formaldehyde dehydrogenase low > 74
Acinetobacter radioresistens SK82 0.33 MPMX26_00623 Amino-acid carrier protein AlsT 0.15 MPMX26_00872 putative zinc-binding alcohol dehydrogenase — —
Parabacteroides merdae CL09T00C40 0.32 HMPREF1078_RS05990 alanine/glycine:cation symporter family protein 0.10 HMPREF1078_RS14845 alcohol dehydrogenase low > 61
Pseudomonas sp. S08-1 0.31 OH686_10860 Putative sodium/proton-dependent alanine carrier protein YrbD 0.13 OH686_01230 Uncharacterized zinc-type alcohol dehydrogenase-like protein YbdR low > 80
Enterobacter asburiae PDN3 0.31 EX28DRAFT_1903 amino acid carrier protein 0.62 EX28DRAFT_3869 L-threonine 3-dehydrogenase (EC 1.1.1.103) low > 76
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS29820 alanine:cation symporter family protein 0.17 PFLU_RS19505 erythritol/L-threitol dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.31 PFLU_RS29820 alanine:cation symporter family protein 0.17 PFLU_RS19505 erythritol/L-threitol dehydrogenase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_5052 Sodium:alanine symporter 0.16 Psyr_2567 Zinc-containing alcohol dehydrogenase superfamily low > 86
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_5052 Sodium:alanine symporter 0.16 Psyr_2567 Zinc-containing alcohol dehydrogenase superfamily low > 86
Pseudomonas simiae WCS417 0.31 PS417_28135 sodium:alanine symporter 0.17 PS417_17720 xylitol 2-dehydrogenase (EC 1.1.1.9) (from data) low > 88
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_09955 sodium:alanine symporter 0.17 AO353_25145 butanediol dehydrogenase low > 101
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_4086 sodium/alanine transporter 0.17 Pf6N2E2_668 2,3-butanediol dehydrogenase, R-alcohol forming, (R)- and (S)-acetoin-specific (EC 1.1.1.4) low > 103
Serratia liquefaciens MT49 0.30 IAI46_03050 sodium:alanine symporter family protein 0.63 IAI46_24725 L-threonine 3-dehydrogenase low > 86
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_11095 sodium:alanine symporter 0.17 AO356_24895 butanediol dehydrogenase low > 104
Pseudomonas sp. RS175 0.30 PFR28_04500 Amino-acid carrier protein AlsT 0.17 PFR28_01772 putative zinc-type alcohol dehydrogenase-like protein YdjJ low > 88
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_741 sodium/alanine transporter 0.13 PfGW456L13_3657 Threonine dehydrogenase and related Zn-dependent dehydrogenases low > 87
Pseudomonas putida KT2440 0.29 PP_0496 Sodium/alanine symporter 0.16 PP_0552 2,3-butanediol dehydrogenase low > 96
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF1082 Putative alanine/glycine transport protein 0.63 GFF394 L-threonine 3-dehydrogenase (EC 1.1.1.103) low > 78
Escherichia coli ECRC101 0.27 MCAODC_01600 yaaJ Uncharacterized transporter YaaJ 0.63 MCAODC_06225 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECRC101 0.27 OKFHMN_11085 yaaJ Uncharacterized transporter YaaJ 0.63 OKFHMN_15715 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECRC102 0.27 NIAGMN_08935 yaaJ Uncharacterized transporter YaaJ 0.63 NIAGMN_13475 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECRC98 0.27 JDDGAC_14680 yaaJ Uncharacterized transporter YaaJ 0.63 JDDGAC_19340 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECRC99 0.27 KEDOAH_17070 yaaJ Uncharacterized transporter YaaJ 0.63 KEDOAH_12435 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECOR38 0.27 HEPCGN_09090 yaaJ Uncharacterized transporter YaaJ 0.63 HEPCGN_14555 tdh L-threonine 3-dehydrogenase low > 85
Escherichia coli BW25113 0.27 b0007 yaaJ predicted transporter (NCBI) 0.63 b3616 tdh L-threonine 3-dehydrogenase (NCBI) low > 76
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.1265.1 sodium/alanine symporter family protein 0.54 Xcc-8004.4082.1 L-threonine 3-dehydrogenase (EC 1.1.1.103) low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_03653 Amino-acid carrier protein AlsT 0.63 OHPLBJKB_00083 L-threonine 3-dehydrogenase low > 73
Escherichia coli BL21 0.27 ECD_00007 putative transporter 0.63 ECD_03474 L-threonine 3-dehydrogenase, NAD(P)-binding low > 60
Escherichia coli ECRC62 0.27 BNILDI_08190 yaaJ Uncharacterized transporter YaaJ 0.63 BNILDI_03920 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECOR27 0.27 NOLOHH_03415 yaaJ Uncharacterized transporter YaaJ 0.63 NOLOHH_07595 tdh L-threonine 3-dehydrogenase low > 57
Escherichia coli Nissle 1917 0.27 ECOLIN_RS00040 sodium:alanine symporter family protein 0.63 ECOLIN_RS20635 L-threonine 3-dehydrogenase low > 52
Escherichia fergusonii Becca 0.26 EFB2_04036 Amino-acid carrier protein AlsT 0.63 EFB2_00194 L-threonine 3-dehydrogenase low > 86
Klebsiella michiganensis M5al 0.26 BWI76_RS04265 sodium:alanine symporter family protein 0.63 BWI76_RS27250 L-threonine 3-dehydrogenase low > 92
Enterobacter sp. TBS_079 0.25 MPMX20_00715 Amino-acid carrier protein AlsT 0.62 MPMX20_00116 L-threonine 3-dehydrogenase low > 85
Rahnella sp. WP5 0.25 EX31_RS03925 alanine:cation symporter family protein 0.62 EX31_RS14385 L-threonine 3-dehydrogenase low > 89
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS14800 amino acid carrier protein 0.61 QEN71_RS16540 L-threonine 3-dehydrogenase low > 153

Not shown: 9 genomes with orthologs for PGA1_78p00280 only; 35 genomes with orthologs for PGA1_c34320 only