Conservation of cofitness between Psest_3117 and Psest_3115 in Pseudomonas stutzeri RCH2

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3117 electron transport complex, RnfABCDGE type, E subunit 1.0 Psest_3115 electron transport complex, RnfABCDGE type, D subunit 0.87 2
Marinobacter adhaerens HP15 0.64 HP15_1286 SoxR-reducing system protein RsxE 0.45 HP15_1288 electron transport complex, RnfABCDGE type, D subunit 0.89 3
Alteromonas macleodii MIT1002 0.58 MIT1002_01252 Electron transport complex protein RnfE 0.38 MIT1002_01254 Nitrogen fixation protein RnfD
Shewanella sp. ANA-3 0.53 Shewana3_2173 electron transport complex RsxE subunit (RefSeq) 0.44 Shewana3_2171 electron transport complex, RnfABCDGE type, D subunit (RefSeq)
Shewanella oneidensis MR-1 0.52 SO2513 NqrDE/RnfAE family protein (NCBI ptt file) 0.44 SO2511 membrane protein, putative (NCBI ptt file)
Shewanella loihica PV-4 0.52 Shew_2071 SoxR-reducing system protein RsxE (RefSeq) 0.41 Shew_2069 electron transport complex, RnfABCDGE type, D subunit (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_05150 electron transport complex subunit E 0.43 CSW01_05160 electron transport complex subunit D
Shewanella amazonensis SB2B 0.50 Sama_1835 electron transport complex RsxE subunit (RefSeq) 0.43 Sama_1833 hypothetical protein (RefSeq)
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_2366 electron transport complex, RnfABCDGE type, E subunit 0.43 B158DRAFT_2368 electron transport complex, RnfABCDGE type, D subunit
Pectobacterium carotovorum WPP14 0.48 HER17_RS10855 electron transport complex subunit E 0.45 HER17_RS10845 electron transport complex subunit RsxD 0.88 7
Erwinia tracheiphila SCR3 0.46 LU632_RS11310 electron transport complex subunit E 0.43 LU632_RS11320 rsxD electron transport complex subunit RsxD
Dickeya dadantii 3937 0.46 DDA3937_RS10550 electron transport complex subunit E 0.46 DDA3937_RS10560 electron transport complex subunit RsxD
Dickeya dianthicola 67-19 0.46 HGI48_RS10550 electron transport complex subunit E 0.44 HGI48_RS10560 electron transport complex subunit RsxD
Dickeya dianthicola ME23 0.45 DZA65_RS11030 electron transport complex subunit E 0.45 DZA65_RS11040 electron transport complex subunit RsxD low > 75
Rahnella sp. WP5 0.43 EX31_RS06595 electron transport complex subunit E 0.46 EX31_RS06605 electron transport complex subunit RsxD low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF3642 Electron transport complex protein RnfE 0.45 GFF3644 Electron transport complex protein RnfD 0.68 56
Enterobacter sp. TBS_079 0.41 MPMX20_02006 Ion-translocating oxidoreductase complex subunit E 0.43 MPMX20_02008 Ion-translocating oxidoreductase complex subunit D 0.52 1
Escherichia coli ECRC102 0.41 NIAGMN_00535 rsxE electron transport complex subunit RsxE 0.45 NIAGMN_00525 rsxD electron transport complex subunit RsxD
Escherichia coli ECRC99 0.41 KEDOAH_00575 rsxE electron transport complex subunit RsxE 0.45 KEDOAH_00565 rsxD electron transport complex subunit RsxD
Escherichia coli ECRC101 0.41 OKFHMN_27530 rsxE electron transport complex subunit RsxE 0.45 OKFHMN_27540 rsxD electron transport complex subunit RsxD
Escherichia coli ECRC101 0.41 MCAODC_17880 rsxE electron transport complex subunit RsxE 0.45 MCAODC_17870 rsxD electron transport complex subunit RsxD
Escherichia coli ECRC62 0.41 BNILDI_16840 rsxE electron transport complex subunit RsxE 0.45 BNILDI_16850 rsxD electron transport complex subunit RsxD
Enterobacter asburiae PDN3 0.41 EX28DRAFT_1628 electron transport complex, RnfABCDGE type, E subunit 0.43 EX28DRAFT_1626 electron transport complex, RnfABCDGE type, D subunit low > 76
Klebsiella michiganensis M5al 0.41 BWI76_RS16380 electron transport complex subunit RsxE 0.47 BWI76_RS16370 electron transport complex subunit D
Escherichia coli ECRC98 0.41 JDDGAC_02120 rsxE electron transport complex subunit RsxE 0.45 JDDGAC_02130 rsxD electron transport complex subunit RsxD
Escherichia fergusonii Becca 0.41 EFB2_02360 Ion-translocating oxidoreductase complex subunit E 0.46 EFB2_02362 Ion-translocating oxidoreductase complex subunit D low > 86
Escherichia coli Nissle 1917 0.41 ECOLIN_RS09105 electron transport complex subunit RsxE 0.46 ECOLIN_RS09095 electron transport complex subunit RsxD
Pantoea sp. MT58 0.41 IAI47_10470 electron transport complex subunit E 0.44 IAI47_10460 electron transport complex subunit RsxD
Phocaeicola vulgatus CL09T03C04 0.40 HMPREF1058_RS06325 electron transport complex subunit E 0.27 HMPREF1058_RS06335 RnfABCDGE type electron transport complex subunit D 0.91 2
Bacteroides thetaiotaomicron VPI-5482 0.40 BT0621 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfE (NCBI ptt file) 0.30 BT0619 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfD (NCBI ptt file) 0.57 2
Escherichia coli ECOR27 0.40 NOLOHH_18050 rsxE electron transport complex subunit RsxE 0.45 NOLOHH_18060 rsxD electron transport complex subunit RsxD
Escherichia coli BL21 0.40 ECD_01602 SoxR iron-sulfur cluster reduction factor component; electron transport inner membrane NADH-quinone reductase 0.45 ECD_01600 SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex
Escherichia coli BW25113 0.40 b1632 rsxE NADH-ubiquinone oxidoreductase (NCBI) 0.45 b1630 rsxD electron transport complex protein RnfD (NCBI) 0.86 2
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_02094 Electron transport complex subunit RsxE 0.45 OHPLBJKB_02096 Electron transport complex subunit RsxD 0.41 72
Escherichia coli ECOR38 0.40 HEPCGN_05915 rsxE electron transport complex subunit RsxE 0.45 HEPCGN_05925 rsxD electron transport complex subunit RsxD 0.93 15
Phocaeicola dorei CL03T12C01 0.40 ABI39_RS20085 electron transport complex subunit E 0.27 ABI39_RS20095 RnfABCDGE type electron transport complex subunit D 0.92 2
Bacteroides ovatus ATCC 8483 0.39 BACOVA_02240 electron transport complex, RnfABCDGE type, E subunit 0.29 BACOVA_02238 electron transport complex, RnfABCDGE type, D subunit 0.77 3
Bacteroides stercoris CC31F 0.39 HMPREF1181_RS15105 electron transport complex subunit E 0.28 HMPREF1181_RS15115 RnfABCDGE type electron transport complex subunit D
Magnetospirillum magneticum AMB-1 0.38 AMB_RS13175 electron transport complex subunit E 0.32 AMB_RS13165 electron transporter RnfD low > 64
Serratia liquefaciens MT49 0.38 IAI46_11460 electron transport complex subunit E 0.44 IAI46_11470 electron transport complex subunit RsxD low > 86
Desulfovibrio vulgaris Hildenborough JW710 0.37 DVU2795 nqr4 NADH:quinone oxidoreductase subunit RnfE (Shelley Haveman) 0.18 DVU2793 electron transport complex protein RnfD, putative (TIGR) 0.82 1
Parabacteroides merdae CL09T00C40 0.37 HMPREF1078_RS15430 electron transport complex subunit E 0.26 HMPREF1078_RS15440 RnfABCDGE type electron transport complex subunit D
Fusobacterium nucleatum SB010 0.34 HUW76_09720 electron transport complex subunit E 0.25 HUW76_09730 RnfABCDGE type electron transport complex subunit D 0.99 3
Dechlorosoma suillum PS 0.34 Dsui_2984 electron transport complex, RnfABCDGE type, E subunit 0.40 Dsui_2982 electron transport complex, RnfABCDGE type, D subunit
Pseudomonas fluorescens FW300-N1B4 0.18 Pf1N1B4_738 Electron transport complex protein RnfE 0.55 Pf1N1B4_736 Electron transport complex protein RnfD low > 87
Pseudomonas fluorescens FW300-N2E3 0.18 AO353_04080 NADH:quinone oxidoreductase 0.58 AO353_04070 electron transporter RnfD low > 101
Pseudomonas fluorescens FW300-N2C3 0.17 AO356_18350 NADH:quinone oxidoreductase 0.51 AO356_18360 electron transporter RnfD low > 104

Not shown: 0 genomes with orthologs for Psest_3117 only; 5 genomes with orthologs for Psest_3115 only