Conservation of cofitness between Psest_2148 and Psest_3016 in Pseudomonas stutzeri RCH2

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2148 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 1.0 Psest_3016 TonB-dependent vitamin B12 receptor 0.24 8
Pedobacter sp. GW460-11-11-14-LB5 0.61 CA265_RS09980 NAD(P)-dependent oxidoreductase 0.12 CA265_RS09235 hypothetical protein low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.61 ABZR88_RS08195 SDR family oxidoreductase 0.12 ABZR88_RS09845 TonB-dependent siderophore receptor low > 71
Acinetobacter radioresistens SK82 0.60 MPMX26_02887 General stress protein 39 0.16 MPMX26_02619 Vitamin B12 transporter BtuB low > 36
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS23060 SDR family oxidoreductase 0.25 ABZR87_RS00095 TonB-dependent receptor low > 80
Pontibacter actiniarum KMM 6156, DSM 19842 0.59 CA264_17070 NAD(P)-dependent oxidoreductase 0.06 CA264_19150 TonB dependent receptor low > 74
Rhodospirillum rubrum S1H 0.58 Rru_A3667 Short-chain dehydrogenase/reductase SDR (NCBI) 0.12 Rru_A0488 TonB-dependent receptor (NCBI) low > 58
Dyella japonica UNC79MFTsu3.2 0.57 ABZR86_RS03000 SDR family oxidoreductase 0.42 ABZR86_RS14720 TonB-dependent vitamin B12 receptor low > 74
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS18690 short-chain dehydrogenase 0.06 HSERO_RS00535 TonB-dependent receptor low > 78
Lysobacter sp. OAE881 0.56 ABIE51_RS17935 SDR family oxidoreductase 0.44 ABIE51_RS04930 TonB-dependent vitamin B12 receptor low > 62
Variovorax sp. OAS795 0.55 ABID97_RS22950 SDR family oxidoreductase 0.25 ABID97_RS17425 TonB-dependent receptor low > 91
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_02817 hypothetical protein 0.24 H281DRAFT_00136 vitamin B12 transporter low > 103
Paraburkholderia graminis OAS925 0.51 ABIE53_005974 NAD(P)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) 0.24 ABIE53_001246 vitamin B12 transporter 0.21 11
Pantoea sp. MT58 0.51 IAI47_10615 glucose 1-dehydrogenase 0.20 IAI47_00955 TonB-dependent vitamin B12 receptor BtuB low > 76
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS10050 oxidoreductase 0.24 BPHYT_RS04850 TonB-denpendent receptor low > 109
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS18935 glucose 1-dehydrogenase 0.24 QEN71_RS25145 TonB-dependent receptor low > 153
Brevundimonas sp. GW460-12-10-14-LB2 0.48 A4249_RS01720 SDR family oxidoreductase 0.13 A4249_RS12105 TonB-dependent receptor low > 48
Alteromonas macleodii MIT1002 0.46 MIT1002_02512 putative oxidoreductase YghA 0.15 MIT1002_00716 Outer membrane cobalamin translocator low > 70
Rahnella sp. WP5 0.46 EX31_RS01195 SDR family oxidoreductase 0.20 EX31_RS14135 TonB-dependent vitamin B12 receptor BtuB low > 89
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.3923.1 Short-chain dehydrogenase/reductase SDR 0.42 Xcc-8004.1388.1 Outer membrane vitamin B12 receptor BtuB low > 74
Escherichia coli ECRC101 0.45 MCAODC_09495 yghA NADP(+)-dependent aldehyde reductase 0.20 MCAODC_04030 btuB TonB-dependent vitamin B12 receptor BtuB — —
Escherichia coli Nissle 1917 0.45 ECOLIN_RS17295 NADP(+)-dependent aldehyde reductase 0.19 ECOLIN_RS22905 TonB-dependent vitamin B12 receptor BtuB low > 52
Escherichia coli ECOR27 0.45 NOLOHH_10755 yghA NADP(+)-dependent aldehyde reductase 0.19 NOLOHH_05675 btuB TonB-dependent vitamin B12 receptor BtuB low > 57
Escherichia coli ECRC101 0.45 OKFHMN_18980 yghA NADP(+)-dependent aldehyde reductase 0.20 OKFHMN_13530 btuB TonB-dependent vitamin B12 receptor BtuB — —
Escherichia coli ECRC102 0.45 NIAGMN_16745 yghA NADP(+)-dependent aldehyde reductase 0.20 NIAGMN_11280 btuB TonB-dependent vitamin B12 receptor BtuB — —
Escherichia coli BW25113 0.45 b3003 yghA oxidoreductase (NCBI) 0.20 b3966 btuB vitamin B12/cobalamin outer membrane transporter (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_00696 putative oxidoreductase YghA 0.19 OHPLBJKB_04084 Vitamin B12 transporter BtuB low > 73
Escherichia coli ECOR38 0.45 HEPCGN_17840 yghA NADP(+)-dependent aldehyde reductase 0.19 HEPCGN_12185 btuB TonB-dependent vitamin B12 receptor BtuB low > 85
Escherichia coli ECRC99 0.45 KEDOAH_09165 yghA NADP(+)-dependent aldehyde reductase 0.19 KEDOAH_14630 btuB TonB-dependent vitamin B12 receptor BtuB — —
Escherichia coli ECRC98 0.45 JDDGAC_22615 yghA NADP(+)-dependent aldehyde reductase 0.20 JDDGAC_17155 btuB TonB-dependent vitamin B12 receptor BtuB — —
Escherichia coli ECRC62 0.45 BNILDI_00760 yghA NADP(+)-dependent aldehyde reductase 0.19 BNILDI_05850 btuB TonB-dependent vitamin B12 receptor BtuB — —
Escherichia fergusonii Becca 0.45 EFB2_00805 putative oxidoreductase YghA 0.17 EFB2_04644 Vitamin B12 transporter BtuB low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF3116 FIG00553873: hypothetical protein 0.18 GFF2352 Outer membrane vitamin B12 receptor BtuB low > 78
Klebsiella michiganensis M5al 0.44 BWI76_RS14125 SDR family oxidoreductase 0.18 BWI76_RS00890 vitamin B12/cobalamin outer membrane transporter low > 92
Cupriavidus basilensis FW507-4G11 0.26 RR42_RS21765 3-oxoacyl-ACP reductase 0.25 RR42_RS16140 TonB-dependent receptor low > 128
Serratia liquefaciens MT49 0.26 IAI46_17490 SDR family oxidoreductase 0.19 IAI46_24450 TonB-dependent vitamin B12 receptor BtuB low > 86
Castellaniella sp019104865 MT123 0.25 ABCV34_RS07380 SDR family NAD(P)-dependent oxidoreductase 0.23 ABCV34_RS14545 TonB-dependent receptor low > 48
Caulobacter crescentus NA1000 Δfur 0.23 CCNA_02738 3-ketoacyl-(acyl-carrier-protein) reductase 0.18 CCNA_01826 vitamin B12 receptor low > 67
Caulobacter crescentus NA1000 0.23 CCNA_02738 3-ketoacyl-(acyl-carrier-protein) reductase 0.18 CCNA_01826 vitamin B12 receptor low > 66
Rhodanobacter denitrificans FW104-10B01 0.21 LRK54_RS14345 SDR family oxidoreductase 0.41 LRK54_RS07830 TonB-dependent vitamin B12 receptor low > 59
Rhodanobacter denitrificans MT42 0.21 LRK55_RS14065 SDR family oxidoreductase 0.41 LRK55_RS07560 TonB-dependent vitamin B12 receptor low > 63

Not shown: 21 genomes with orthologs for Psest_2148 only; 20 genomes with orthologs for Psest_3016 only