Conservation of cofitness between PS417_17550 and PS417_13850 in Pseudomonas simiae WCS417

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_17550 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 1.0 PS417_13850 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.38 7
Pseudomonas fluorescens SBW25 1.00 PFLU_RS19360 alpha-ketoacid dehydrogenase subunit beta 0.98 PFLU_RS14770 acyl-CoA dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS19360 alpha-ketoacid dehydrogenase subunit beta 0.98 PFLU_RS14770 acyl-CoA dehydrogenase 0.45 16
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_26640 2-oxoisovalerate dehydrogenase 0.98 AO353_25680 2-methylbutanoyl-CoA dehydrogenase / butanoyl-CoA dehydrogenase / isobutyryl-CoA dehydrogenase (EC 1.3.8.1; EC 1.3.8.5) (from data) 0.34 46
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_22985 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.96 AO356_26355 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.60 10
Pseudomonas sp. RS175 0.94 PFR28_02446 2-oxoisovalerate dehydrogenase subunit beta 0.94 PFR28_01883 Acyl-CoA dehydrogenase 0.54 24
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_480 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC 1.2.4.4) (from data) 0.95 Pf6N2E2_1146 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.47 20
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_4479 Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) 0.97 Pf1N1B4_4787 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.27 39
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_3541 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.95 PfGW456L13_2983 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.37 33
Pseudomonas putida KT2440 0.89 PP_4402 branched-chain alpha-keto acid dehydrogenase complex, beta subunit 0.91 PP_2216 short-chain acyl-CoA dehydrogenase 0.32 18
Variovorax sp. OAS795 0.81 ABID97_RS06675 alpha-ketoacid dehydrogenase subunit beta 0.65 ABID97_RS25215 acyl-CoA dehydrogenase family protein low > 91
Castellaniella sp019104865 MT123 0.80 ABCV34_RS04970 alpha-ketoacid dehydrogenase subunit beta 0.42 ABCV34_RS03995 acyl-CoA dehydrogenase family protein 0.98 8
Agrobacterium fabrum C58 0.74 Atu3472 2-oxoisovalerate dehydrogenase subunit beta 0.75 Atu3474 acyl-CoA dehydrogenase 0.32 2
Sinorhizobium meliloti 1021 0.74 SMc03202 branched-chain alpha-ketoacid dehydrogenase, E1 component beta subunit (EC 1.2.4.4) (from data) 0.39 SM_b20753 acyl-CoA dehydrogenase 0.14 76
Bosea sp. OAE506 0.74 ABIE41_RS02480 alpha-ketoacid dehydrogenase subunit beta 0.37 ABIE41_RS23925 isobutyryl-CoA dehydrogenase low > 77
Sphingomonas koreensis DSMZ 15582 0.72 Ga0059261_2272 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 0.38 Ga0059261_3793 Acyl-CoA dehydrogenases low > 68
Brevundimonas sp. GW460-12-10-14-LB2 0.67 A4249_RS13195 alpha-ketoacid dehydrogenase subunit beta 0.39 A4249_RS03585 isobutyryl-CoA dehydrogenase low > 48
Alteromonas macleodii MIT1002 0.44 MIT1002_02013 2-oxoisovalerate dehydrogenase subunit beta 0.41 MIT1002_01978 Acyl-CoA dehydrogenase low > 70
Shewanella loihica PV-4 0.44 Shew_1926 transketolase, central region (RefSeq) 0.44 Shew_1669 butyryl-CoA dehydrogenase (RefSeq) low > 60
Shewanella sp. ANA-3 0.43 Shewana3_2130 transketolase, central region (RefSeq) 0.45 Shewana3_2769 Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) (from data) 0.61 8
Shewanella amazonensis SB2B 0.43 Sama_1710 alpha keto acid dehydrogenase complex, E1 component, beta subunit (RefSeq) 0.43 Sama_1377 butyryl-CoA dehydrogenase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.43 SO2340 alpha keto acid dehydrogenase complex, E1 component, beta subunit (NCBI ptt file) 0.44 SO1679 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) 0.55 4
Lysobacter sp. OAE881 0.41 ABIE51_RS04040 alpha-ketoacid dehydrogenase subunit beta 0.42 ABIE51_RS09100 acyl-CoA dehydrogenase family protein 0.83 11
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS18445 alpha-ketoacid dehydrogenase subunit beta 0.44 ABZR86_RS07575 acyl-CoA dehydrogenase family protein
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_00750 acoB alpha-ketoacid dehydrogenase subunit beta 0.42 OKGIIK_09175 caiA acyl-CoA dehydrogenase
Kangiella aquimarina DSM 16071 0.40 B158DRAFT_1476 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 0.72 B158DRAFT_2510 Acyl-CoA dehydrogenases
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS05880 alpha-ketoacid dehydrogenase subunit beta 0.43 LRK54_RS02105 acyl-CoA dehydrogenase family protein
Rhodanobacter denitrificans MT42 0.40 LRK55_RS05635 alpha-ketoacid dehydrogenase subunit beta 0.43 LRK55_RS01880 acyl-CoA dehydrogenase family protein
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.570.1 Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) 0.42 Xcc-8004.3378.1 hypothetical protein low > 74
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS00945 alpha-ketoacid dehydrogenase subunit beta 0.61 RALBFv3_RS10505 butyryl-CoA dehydrogenase low > 76
Ralstonia solanacearum UW163 0.38 UW163_RS14255 alpha-ketoacid dehydrogenase subunit beta 0.61 UW163_RS03075 butyryl-CoA dehydrogenase
Mycobacterium tuberculosis H37Rv 0.37 Rv2496c Probable branched-chain keto acid dehydrogenase E1 component, beta subunit BkdB 0.38 Rv3274c Probable acyl-CoA dehydrogenase FadE25
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS33050 2-oxoisovalerate dehydrogenase 0.64 RR42_RS00895 acyl-CoA dehydrogenase low > 128

Not shown: 2 genomes with orthologs for PS417_17550 only; 39 genomes with orthologs for PS417_13850 only