Conservation of cofitness between Psest_1505 and Psest_2714 in Pseudomonas stutzeri RCH2

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1505 Organic radical activating enzymes 1.0 Psest_2714 7-cyano-7-deazaguanine reductase 0.41 3
Pseudomonas sp. S08-1 0.84 OH686_19175 7-carboxy-7-deazaguanine synthase 0.80 OH686_22700 queuine synthase low > 80
Pseudomonas sp. RS175 0.81 PFR28_03404 7-carboxy-7-deazaguanine synthase 0.82 PFR28_01136 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 88
Pseudomonas fluorescens SBW25 0.80 PFLU_RS24045 7-carboxy-7-deazaguanine synthase QueE 0.80 PFLU_RS07770 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 109
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS24045 7-carboxy-7-deazaguanine synthase QueE 0.80 PFLU_RS07770 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.44 6
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_18065 7-carboxy-7-deazaguanine synthase 0.80 AO356_02205 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.37 24
Pseudomonas putida KT2440 0.80 PP_1225 7-carboxy-7-deazaguanine synthase 0.79 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.21 37
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_629 Queuosine Biosynthesis QueE Radical SAM 0.80 Pf1N1B4_65 NADPH dependent preQ0 reductase (EC 1.7.1.13) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_1418 Radical SAM 0.83 Psyr_1907 GTP cyclohydrolase I — —
Pseudomonas simiae WCS417 0.79 PS417_22405 7-carboxy-7-deazaguanine synthase 0.79 PS417_07695 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.52 3
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_1418 Radical SAM 0.83 Psyr_1907 GTP cyclohydrolase I 0.26 72
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_1861 Queuosine Biosynthesis QueE Radical SAM 0.80 PfGW456L13_4015 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.34 11
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_03540 7-carboxy-7-deazaguanine synthase 0.82 AO353_00345 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.37 2
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_5545 Queuosine Biosynthesis QueE Radical SAM 0.80 Pf6N2E2_2264 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.55 4
Xanthomonas campestris pv. campestris strain 8004 0.64 Xcc-8004.1449.1 Queuosine Biosynthesis QueE Radical SAM 0.45 Xcc-8004.4789.1 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.39 3
Lysobacter sp. OAE881 0.62 ABIE51_RS05100 7-carboxy-7-deazaguanine synthase QueE 0.46 ABIE51_RS00515 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.60 1
Acinetobacter radioresistens SK82 0.61 MPMX26_02174 7-carboxy-7-deazaguanine synthase 0.40 MPMX26_02105 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.94 2
Dyella japonica UNC79MFTsu3.2 0.61 ABZR86_RS10790 7-carboxy-7-deazaguanine synthase QueE 0.52 ABZR86_RS16195 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.67 4
Dechlorosoma suillum PS 0.59 Dsui_0476 organic radical activating enzyme 0.54 Dsui_0505 7-cyano-7-deazaguanine reductase 0.59 9
Rhodanobacter sp. FW510-T8 0.58 OKGIIK_01890 7-carboxy-7-deazaguanine synthase 0.53 OKGIIK_13395 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 52
Rhodanobacter denitrificans MT42 0.57 LRK55_RS04640 7-carboxy-7-deazaguanine synthase QueE 0.52 LRK55_RS10150 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 63
Rhodanobacter denitrificans FW104-10B01 0.57 LRK54_RS04860 7-carboxy-7-deazaguanine synthase QueE 0.52 LRK54_RS10510 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.45 26
Kangiella aquimarina DSM 16071 0.56 B158DRAFT_1144 Organic radical activating enzymes 0.45 B158DRAFT_2159 7-cyano-7-deazaguanine reductase 0.68 5
Serratia liquefaciens MT49 0.17 IAI46_03675 7-carboxy-7-deazaguanine synthase QueE 0.49 IAI46_21580 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 86
Shewanella amazonensis SB2B 0.16 Sama_1825 radical activating enzyme (RefSeq) 0.47 Sama_1120 queF 7-cyano-7-deazaguanine reductase (RefSeq) low > 62
Shewanella sp. ANA-3 0.16 Shewana3_2163 radical activating enzyme (RefSeq) 0.49 Shewana3_2835 queF 7-cyano-7-deazaguanine reductase (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.16 MIT1002_01264 7-carboxy-7-deazaguanine synthase 0.46 MIT1002_00988 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.97 2
Rahnella sp. WP5 0.16 EX31_RS07920 7-carboxy-7-deazaguanine synthase QueE 0.50 EX31_RS13085 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 89
Pantoea sp. MT58 0.16 IAI47_04140 7-carboxy-7-deazaguanine synthase QueE 0.46 IAI47_04050 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 76
Enterobacter sp. TBS_079 0.16 MPMX20_03645 7-carboxy-7-deazaguanine synthase 0.50 MPMX20_03664 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 85
Escherichia coli ECOR38 0.16 HEPCGN_19205 queE 7-carboxy-7-deazaguanine synthase QueE 0.51 HEPCGN_19445 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 85
Escherichia coli Nissle 1917 0.16 ECOLIN_RS15475 7-carboxy-7-deazaguanine synthase QueE 0.50 ECOLIN_RS15580 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Escherichia fergusonii Becca 0.16 EFB2_01141 7-carboxy-7-deazaguanine synthase 0.50 EFB2_01123 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 86
Pectobacterium carotovorum WPP14 0.16 HER17_RS04200 7-carboxy-7-deazaguanine synthase QueE 0.48 HER17_RS16390 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 75
Enterobacter asburiae PDN3 0.15 EX28DRAFT_2855 putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 0.50 EX28DRAFT_2876 7-cyano-7-deazaguanine reductase low > 76
Escherichia coli BW25113 0.15 b2777 ygcF hypothetical protein (NCBI) 0.50 b2794 yqcD hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.15 OHPLBJKB_00957 7-carboxy-7-deazaguanine synthase 0.50 OHPLBJKB_00937 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 73
Escherichia coli ECRC101 0.15 OKFHMN_20300 queE 7-carboxy-7-deazaguanine synthase QueE 0.51 OKFHMN_20190 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Escherichia coli ECRC101 0.15 MCAODC_10825 queE 7-carboxy-7-deazaguanine synthase QueE 0.51 MCAODC_10715 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Escherichia coli ECRC102 0.15 NIAGMN_18070 queE 7-carboxy-7-deazaguanine synthase QueE 0.51 NIAGMN_17960 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Escherichia coli BL21 0.15 ECD_02622 7-carboxy-7-deazaguanine synthase; queosine biosynthesis 0.50 ECD_02639 7-cyano-7-deazaguanine reductase (NADPH-dependent) low > 60
Escherichia coli ECRC99 0.15 KEDOAH_07830 queE 7-carboxy-7-deazaguanine synthase QueE 0.51 KEDOAH_07940 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Escherichia coli ECRC98 0.15 JDDGAC_23965 queE 7-carboxy-7-deazaguanine synthase QueE 0.51 JDDGAC_23855 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Erwinia tracheiphila SCR3 0.15 LU632_RS06390 queE 7-carboxy-7-deazaguanine synthase QueE 0.47 LU632_RS06280 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 74
Klebsiella michiganensis M5al 0.15 BWI76_RS22780 7-carboxy-7-deazaguanine synthase QueE 0.51 BWI76_RS22865 NADPH-dependent 7-cyano-7-deazaguanine reductase low > 92
Escherichia coli ECRC62 0.15 BNILDI_10675 queE 7-carboxy-7-deazaguanine synthase QueE 0.50 BNILDI_10575 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF — —
Escherichia coli ECOR27 0.15 NOLOHH_12170 queE 7-carboxy-7-deazaguanine synthase QueE 0.50 NOLOHH_12070 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF low > 57

Not shown: 6 genomes with orthologs for Psest_1505 only; 24 genomes with orthologs for Psest_2714 only