Conservation of cofitness between Psest_2116 and Psest_2633 in Pseudomonas stutzeri RCH2

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2116 TonB-dependent siderophore receptor 1.0 Psest_2633 choline dehydrogenase 0.22 9
Pseudomonas aeruginosa PUPa3 0.62 DQ20_RS52090 cntO;inference=COORDINATES pseudopaline transport outer membrane protein CntO 0.84 DQ20_RS43435 betA;go_function=choline choline dehydrogenase low > 101
Pseudomonas aeruginosa PA14 0.62 IKLFDK_29380 pseudopaline transport outer membrane protein CntO 0.85 IKLFDK_26570 choline dehydrogenase low > 98
Pseudomonas aeruginosa MRSN321 0.62 DY961_RS09960 cntO;inference=COORDINATES pseudopaline transport outer membrane protein CntO 0.85 DY961_RS25120 betA;go_function=choline choline dehydrogenase low > 100
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_16650 TonB-dependent receptor 0.82 AO356_13790 choline dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_5254 Ferrichrome-iron receptor 0.82 Pf6N2E2_4677 Choline dehydrogenase (EC 1.1.99.1) low > 103
Pseudomonas sp. RS175 0.59 PFR28_00190 Metal-pseudopaline receptor CntO 0.82 PFR28_04168 Oxygen-dependent choline dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_05095 TonB-dependent receptor 0.82 AO353_07810 choline dehydrogenase low > 101
Pseudomonas sp. DMC3 0.59 GFF1845 Metal-pseudopaline receptor CntO 0.81 GFF138 Oxygen-dependent choline dehydrogenase low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_2229 TonB-dependent siderophore receptor 0.84 Psyr_4732 choline dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_2229 TonB-dependent siderophore receptor 0.84 Psyr_4732 choline dehydrogenase low > 86
Pseudomonas lactucae CFBP13502 0.58 GEMAOFIL_00946 Metal-pseudopaline receptor CntO 0.82 GEMAOFIL_05395 Oxygen-dependent choline dehydrogenase low > 96
Pseudomonas fluorescens SBW25 0.58 PFLU_RS03750 TonB-dependent siderophore receptor 0.82 PFLU_RS27995 choline dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS03750 TonB-dependent siderophore receptor 0.82 PFLU_RS27995 choline dehydrogenase low > 109
Pseudomonas simiae WCS417 0.57 PS417_03700 TonB-dependent receptor 0.82 PS417_26345 choline dehydrogenase low > 88
Pseudomonas orientalis W4I3 0.56 QF045_RS06680 TonB-dependent siderophore receptor 0.82 QF045_RS00730 choline dehydrogenase low > 93
Pseudomonas segetis P6 0.56 MPMX49_02505 Metal-pseudopaline receptor CntO 0.82 MPMX49_00678 Oxygen-dependent choline dehydrogenase low > 75
Pseudomonas putida KT2440 0.56 PP_3325 putative Outer membrane ferric siderophore receptor 0.82 PP_5064 choline dehydrogenase low > 96
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_1063 Ferrichrome-iron receptor 0.81 Pf1N1B4_2416 Choline dehydrogenase (EC 1.1.99.1) low > 87
Pseudomonas sp. SVBP6 0.54 COO64_RS23255 TonB-dependent siderophore receptor 0.81 COO64_RS13255 betA choline dehydrogenase low > 93
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS07685 membrane protein 0.33 HSERO_RS23855 choline dehydrogenase low > 78
Acidovorax sp. GW101-3H11 0.37 Ac3H11_2364 Ferrichrome-iron receptor 0.34 Ac3H11_4659 Choline dehydrogenase (EC 1.1.99.1) 0.29 28
Ralstonia solanacearum GMI1000 0.33 RS_RS13655 TonB-dependent siderophore receptor 0.32 RS_RS16760 choline dehydrogenase low > 80
Ralstonia solanacearum PSI07 0.33 RPSI07_RS11535 TonB-dependent siderophore receptor 0.33 RPSI07_RS08325 choline dehydrogenase low > 81
Ralstonia solanacearum UW163 0.33 UW163_RS07860 TonB-dependent siderophore receptor 0.34 UW163_RS04665 choline dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS05765 TonB-dependent siderophore receptor 0.34 RALBFv3_RS08945 choline dehydrogenase low > 76
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_0485 TonB-dependent siderophore receptor 0.30 Ga0059261_2257 Choline dehydrogenase and related flavoproteins low > 68
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.4702.1 Ferrichrome-iron receptor 0.80 Xcc-8004.964.1 Choline dehydrogenase (EC 1.1.99.1) low > 74
Sphingobium sp. HT1-2 0.27 GFF155 Ferrichrome-iron receptor 0.32 GFF4729 Oxidoreductase, GMC family low > 95
Alteromonas macleodii MIT1002 0.25 MIT1002_01800 Ferric hydroxamate uptake 0.48 MIT1002_02909 Choline dehydrogenase low > 70
Caulobacter crescentus NA1000 0.25 CCNA_01585 TonB-dependent receptor 0.43 CCNA_02725 choline dehydrogenase low > 66
Caulobacter crescentus NA1000 Δfur 0.25 CCNA_01585 TonB-dependent receptor 0.43 CCNA_02725 choline dehydrogenase low > 67
Pseudomonas fluorescens GW456-L13 0.21 PfGW456L13_4949 Ferrichrome-iron receptor 0.81 PfGW456L13_1082 Choline dehydrogenase (EC 1.1.99.1) low > 87
Escherichia coli ECRC102 0.21 NIAGMN_16600 fhuE TonB-dependent siderophore receptor 0.79 NIAGMN_07105 betA choline dehydrogenase low > 80
Escherichia coli ECRC100 0.21 OKFHMN_18835 fhuE TonB-dependent siderophore receptor 0.79 OKFHMN_09050 betA choline dehydrogenase low > 79
Escherichia coli ECRC101 0.21 MCAODC_09350 fhuE TonB-dependent siderophore receptor 0.79 MCAODC_28275 betA choline dehydrogenase low > 87
Escherichia coli ECRC98 0.21 JDDGAC_22470 fhuE TonB-dependent siderophore receptor 0.78 JDDGAC_12700 betA choline dehydrogenase low > 87
Escherichia coli ECRC99 0.21 KEDOAH_09310 fhuE TonB-dependent siderophore receptor 0.79 KEDOAH_18915 betA choline dehydrogenase — —
Escherichia fergusonii Becca 0.21 EFB2_00779 Metal-pseudopaline receptor CntO 0.79 EFB2_03724 Oxygen-dependent choline dehydrogenase low > 86
Escherichia coli Nissle 1917 0.21 ECOLIN_RS17485 TonB-dependent siderophore receptor 0.79 ECOLIN_RS02050 choline dehydrogenase low > 55
Pectobacterium carotovorum WPP14 0.21 HER17_RS15480 TonB-dependent siderophore receptor 0.83 HER17_RS08395 choline dehydrogenase low > 75
Dickeya dadantii 3937 0.21 DDA3937_RS05980 TonB-dependent receptor 0.77 DDA3937_RS13260 choline dehydrogenase low > 74
Enterobacter sp. TBS_079 0.20 MPMX20_03876 Metal-pseudopaline receptor CntO 0.80 MPMX20_01228 Oxygen-dependent choline dehydrogenase low > 85
Klebsiella michiganensis M5al 0.20 BWI76_RS16835 TonB-dependent siderophore receptor 0.81 BWI76_RS07610 choline dehydrogenase low > 92
Klebsiella pneumoniae MKP103 0.20 KDGMDA_23990 TonB-dependent siderophore receptor 0.81 KDGMDA_15960 choline dehydrogenase low > 95
Paraburkholderia graminis OAS925 0.19 ABIE53_001697 iron complex outermembrane receptor protein 0.78 ABIE53_006149 choline dehydrogenase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.19 H281DRAFT_04921 iron complex outermembrane recepter protein 0.78 H281DRAFT_02463 choline dehydrogenase low > 103
Xanthobacter sp. DMC5 0.19 GFF2748 Metal-pseudopaline receptor CntO 0.32 GFF3460 Alcohol dehydrogenase [acceptor] — —

Not shown: 11 genomes with orthologs for Psest_2116 only; 39 genomes with orthologs for Psest_2633 only