Conservation of cofitness between Psest_2632 and Psest_2406 in Pseudomonas stutzeri RCH2

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2632 ribosomal protein S12 methylthiotransferase RimO 1.0 Psest_2406 nitrite reductase [NAD(P)H], large subunit 0.25 10
Pseudomonas sp. S08-1 0.89 OH686_18875 ribosomal protein S12 methylthiotransferase RimO 0.78 OH686_20575 Nitrite reductase [NAD(P)H] large subunit low > 80
Pseudomonas putida KT2440 0.87 PP_1197 ribosomal protein S12 methylthiotransferase 0.81 PP_1705 nitrite reductase [NAD(P)H] large subunit low > 96
Pseudomonas sp. RS175 0.85 PFR28_00486 Ribosomal protein S12 methylthiotransferase RimO 0.78 PFR28_01856 Nitrite reductase [NAD(P)H] low > 88
Pseudomonas simiae WCS417 0.85 PS417_05880 ribosomal protein S12 methylthiotransferase 0.78 PS417_14730 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) low > 88
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO 0.78 PFLU_RS16715 nitrite reductase large subunit low > 109
Pseudomonas fluorescens SBW25 0.84 PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO 0.78 PFLU_RS16715 nitrite reductase large subunit low > 109
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_3160 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.77 Pf1N1B4_5042 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_1392 SSU ribosomal protein S12P methylthiotransferase 0.80 Psyr_3099 assimilatory nitrite reductase (NAD(P)H) large subunit precursor low > 86
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_1392 SSU ribosomal protein S12P methylthiotransferase 0.80 Psyr_3099 assimilatory nitrite reductase (NAD(P)H) large subunit precursor low > 86
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_05600 ribosomal protein S12 methylthiotransferase RimO 0.79 AO356_26200 nitrite reductase low > 104
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_2978 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.79 Pf6N2E2_1114 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) low > 103
Marinobacter adhaerens HP15 0.77 HP15_2459 MiaB-like tRNA modifying enzyme YliG 0.67 HP15_3880 nitrite reductase (NAD(P)H), large subunit low > 73
Castellaniella sp019104865 MT123 0.77 ABCV34_RS14230 30S ribosomal protein S12 methylthiotransferase RimO 0.56 ABCV34_RS06890 nitrite reductase large subunit NirB low > 48
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF731 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.55 GFF3704 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) low > 78
Escherichia coli BW25113 0.73 b0835 yliG predicted SAM-dependent methyltransferase (NCBI) 0.56 b3365 nirB nitrite reductase, large subunit, NAD(P)H-binding (NCBI) low > 76
Escherichia coli ECRC99 0.73 KEDOAH_21850 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.56 KEDOAH_10945 nirB NADPH-nitrite reductase large subunit — —
Escherichia coli ECRC98 0.73 JDDGAC_09695 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.56 JDDGAC_20825 nirB NADPH-nitrite reductase large subunit — —
Escherichia coli ECOR38 0.73 HEPCGN_01970 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.56 HEPCGN_16025 nirB NADPH-nitrite reductase large subunit low > 85
Escherichia coli BL21 0.73 ECD_00802 ribosomal protein S12 methylthiotransferase 0.56 ECD_03216 nitrite reductase, large subunit, NAD(P)H-binding low > 60
Escherichia coli ECRC102 0.73 NIAGMN_04105 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.56 NIAGMN_14965 nirB NADPH-nitrite reductase large subunit — —
Escherichia coli ECRC62 0.73 BNILDI_20690 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.56 BNILDI_02525 nirB NADPH-nitrite reductase large subunit — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_02875 Ribosomal protein S12 methylthiotransferase RimO 0.56 OHPLBJKB_00337 Nitrite reductase [NAD(P)H] low > 73
Escherichia coli ECRC101 0.73 MCAODC_25275 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.56 MCAODC_07725 nirB NADPH-nitrite reductase large subunit — —
Escherichia coli ECOR27 0.73 NOLOHH_22430 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.56 NOLOHH_08995 nirB NADPH-nitrite reductase large subunit — —
Escherichia coli Nissle 1917 0.73 ECOLIN_RS04440 30S ribosomal protein S12 methylthiotransferase RimO 0.56 ECOLIN_RS19270 NADPH-nitrite reductase large subunit — —
Escherichia fergusonii Becca 0.73 EFB2_03271 Ribosomal protein S12 methylthiotransferase RimO 0.56 EFB2_00457 Nitrite reductase [NAD(P)H] low > 86
Escherichia coli ECRC101 0.73 OKFHMN_06060 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.56 OKFHMN_17195 nirB NADPH-nitrite reductase large subunit — —
Acinetobacter radioresistens SK82 0.70 MPMX26_01294 Ribosomal protein S12 methylthiotransferase RimO 0.58 MPMX26_01574 Nitrite reductase [NAD(P)H] — —
Ralstonia sp. UNC404CL21Col 0.67 ABZR87_RS13275 30S ribosomal protein S12 methylthiotransferase RimO 0.57 ABZR87_RS18870 nitrite reductase large subunit NirB low > 80
Ralstonia solanacearum GMI1000 0.67 RS_RS08245 30S ribosomal protein S12 methylthiotransferase RimO 0.57 RS_RS23035 nitrite reductase large subunit low > 80
Ralstonia solanacearum PSI07 0.67 RPSI07_RS16010 30S ribosomal protein S12 methylthiotransferase RimO 0.58 RPSI07_RS05610 nitrite reductase large subunit low > 81
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS01480 30S ribosomal protein S12 methylthiotransferase RimO 0.57 RALBFv3_RS17995 nitrite reductase large subunit low > 76
Ralstonia solanacearum UW163 0.67 UW163_RS14790 30S ribosomal protein S12 methylthiotransferase RimO 0.57 UW163_RS21135 nitrite reductase large subunit — —
Alteromonas macleodii MIT1002 0.66 MIT1002_01933 Ribosomal protein S12 methylthiotransferase RimO 0.60 MIT1002_00698 Nitrite reductase [NAD(P)H] low > 70
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS07640 ribosomal protein S12 methylthiotransferase 0.60 RR42_RS31785 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) low > 128
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS09170 ribosomal protein S12 methylthiotransferase RimO 0.61 BPHYT_RS09840 nitrite reductase — —
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS08100 30S ribosomal protein S12 methylthiotransferase RimO 0.58 ABZR86_RS03855 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) low > 74
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS22185 30S ribosomal protein S12 methylthiotransferase RimO 0.60 QEN71_RS37810 nitrite reductase large subunit NirB low > 153
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_00855 SSU ribosomal protein S12P methylthiotransferase 0.60 H281DRAFT_00967 assimilatory nitrite reductase (NAD(P)H) large subunit precursor (EC 1.7.1.4) low > 103
Paraburkholderia graminis OAS925 0.64 ABIE53_002068 ribosomal protein S12 methylthiotransferase 0.59 ABIE53_002205 nitrite reductase (NADH) large subunit low > 113
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS15005 ribosomal protein S12 methylthiotransferase 0.59 HSERO_RS14535 nitrite reductase low > 78
Acidovorax sp. GW101-3H11 0.61 Ac3H11_364 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.60 Ac3H11_2637 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.32 CA265_RS16365 30S ribosomal protein S12 methylthiotransferase RimO 0.50 CA265_RS09995 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS15425 30S ribosomal protein S12 methylthiotransferase RimO 0.51 ABZR88_RS16910 nitrite reductase large subunit NirB low > 71
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_0564 ribosomal protein S12 methylthiotransferase RimO 0.52 Echvi_1901 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) low > 79

Not shown: 42 genomes with orthologs for Psest_2632 only; 2 genomes with orthologs for Psest_2406 only