Conservation of cofitness between GFF1567 and GFF2198 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1567 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 1.0 GFF2198 NADP-dependent malic enzyme (EC 1.1.1.40) 0.44 3
Escherichia coli BW25113 0.90 b2662 gabT 4-aminobutyrate aminotransferase (NCBI) 0.95 b2463 maeB malic enzyme (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.89 OHPLBJKB_01070 4-aminobutyrate aminotransferase GabT 0.95 OHPLBJKB_01268 NADP-dependent malic enzyme low > 73
Escherichia coli ECOR27 0.89 NOLOHH_12735 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.95 NOLOHH_13685 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 75
Escherichia coli ECRC101 0.89 MCAODC_11430 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.95 MCAODC_12535 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 87
Escherichia coli BL21 0.89 ECD_02518 4-aminobutyrate aminotransferase, PLP-dependent 0.95 ECD_02354 malic enzyme: putative oxidoreductase/phosphotransacetylase low > 61
Escherichia coli ECRC62 0.89 BNILDI_11295 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.95 BNILDI_12495 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 75
Escherichia coli ECRC100 0.89 OKFHMN_20910 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.95 OKFHMN_22005 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 80
Escherichia coli ECRC102 0.89 NIAGMN_18675 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.95 NIAGMN_19775 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase — —
Escherichia coli ECRC99 0.89 KEDOAH_07230 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.95 KEDOAH_06215 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase — —
Escherichia coli ECRC98 0.89 JDDGAC_24570 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.95 JDDGAC_25950 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 86
Escherichia coli ECOR38 0.89 HEPCGN_20155 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.95 HEPCGN_21175 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 87
Escherichia coli Nissle 1917 0.89 ECOLIN_RS14845 4-aminobutyrate--2-oxoglutarate transaminase 0.95 ECOLIN_RS14055 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 55
Escherichia fergusonii Becca 0.89 EFB2_01268 4-aminobutyrate aminotransferase GabT 0.95 EFB2_01425 NADP-dependent malic enzyme low > 86
Variovorax sp. OAS795 0.62 ABID97_RS21585 4-aminobutyrate--2-oxoglutarate transaminase 0.61 ABID97_RS22340 NADP-dependent malic enzyme low > 91
Acidovorax sp. GW101-3H11 0.62 Ac3H11_4179 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.59 Ac3H11_1079 NADP-dependent malic enzyme (EC 1.1.1.40) low > 79
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS21370 4-aminobutyrate aminotransferase 0.61 RR42_RS05210 malic enzyme low > 128
Enterobacter asburiae PDN3 0.54 EX28DRAFT_4294 4-aminobutyrate aminotransferase, prokaryotic type 0.95 EX28DRAFT_0198 Malic enzyme low > 76
Azospirillum brasilense Sp245 0.53 AZOBR_RS19630 4-aminobutyrate aminotransferase 0.56 AZOBR_RS21145 NADP-dependent malic enzyme low > 97
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS05420 4-aminobutyrate aminotransferase 0.62 HSERO_RS16825 NADP-dependent malic enzyme oxidoreductase low > 78
Klebsiella michiganensis M5al 0.53 BWI76_RS26375 aspartate aminotransferase family protein 0.94 BWI76_RS20830 bifunctional malic enzyme oxidoreductase/phosphotransacetylase low > 92
Azospirillum sp. SherDot2 0.53 MPMX19_04919 5-aminovalerate aminotransferase DavT 0.59 MPMX19_04254 NADP-dependent malic enzyme low > 112
Enterobacter sp. TBS_079 0.52 MPMX20_04337 4-aminobutyrate aminotransferase PuuE 0.94 MPMX20_03324 NADP-dependent malic enzyme low > 85
Pectobacterium carotovorum WPP14 0.52 HER17_RS09880 4-aminobutyrate--2-oxoglutarate transaminase 0.87 HER17_RS17280 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 75
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS05190 4-aminobutyrate--2-oxoglutarate transaminase 0.61 ABZR87_RS01565 NADP-dependent malic enzyme low > 80
Acinetobacter radioresistens SK82 0.52 MPMX26_01998 4-aminobutyrate aminotransferase PuuE 0.61 MPMX26_01000 NADP-dependent malic enzyme low > 36
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS19980 4-aminobutyrate--2-oxoglutarate transaminase 0.63 QEN71_RS28455 NADP-dependent malic enzyme low > 153
Variovorax sp. SCN45 0.51 GFF921 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.60 GFF1796 NADP-dependent malic enzyme (EC 1.1.1.40) low > 127
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_03179 4-aminobutyrate aminotransferase apoenzyme 0.63 H281DRAFT_05846 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) low > 103
Serratia liquefaciens MT49 0.51 IAI46_22165 4-aminobutyrate--2-oxoglutarate transaminase 0.87 IAI46_18585 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 86
Ralstonia solanacearum UW163 0.51 UW163_RS04035 4-aminobutyrate--2-oxoglutarate transaminase 0.62 UW163_RS10465 NADP-dependent malic enzyme — —
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS09545 4-aminobutyrate--2-oxoglutarate transaminase 0.62 RALBFv3_RS03260 NADP-dependent malic enzyme low > 76
Dickeya dianthicola ME23 0.51 DZA65_RS12405 4-aminobutyrate--2-oxoglutarate transaminase 0.85 DZA65_RS04265 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 75
Dickeya dadantii 3937 0.50 DDA3937_RS11830 4-aminobutyrate--2-oxoglutarate transaminase 0.86 DDA3937_RS04355 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 74
Dickeya dianthicola 67-19 0.50 HGI48_RS11860 4-aminobutyrate--2-oxoglutarate transaminase 0.84 HGI48_RS04345 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 71
Paraburkholderia graminis OAS925 0.50 ABIE53_004117 4-aminobutyrate aminotransferase 0.63 ABIE53_000015 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) low > 113
Sinorhizobium meliloti 1021 0.50 SM_b21186 4-aminobutyrate aminotransferase 0.55 SMc00169 malic enzyme low > 103
Ralstonia solanacearum PSI07 0.50 RPSI07_RS23805 4-aminobutyrate--2-oxoglutarate transaminase 0.62 RPSI07_RS14050 NADP-dependent malic enzyme low > 81
Ralstonia solanacearum GMI1000 0.50 RS_RS00145 4-aminobutyrate--2-oxoglutarate transaminase 0.62 RS_RS10650 NADP-dependent malic enzyme low > 80
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS22435 4-aminobutyrate aminotransferase 0.63 BPHYT_RS18310 malic enzyme low > 109
Rhizobium sp. OAE497 0.50 ABIE40_RS00145 4-aminobutyrate--2-oxoglutarate transaminase 0.55 ABIE40_RS10450 NADP-dependent malic enzyme 0.54 83
Rhodopseudomonas palustris CGA009 0.50 TX73_012015 4-aminobutyrate--2-oxoglutarate transaminase 0.51 TX73_015740 NADP-dependent malic enzyme low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF2029 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.60 GFF3306 NADP-dependent malic enzyme (EC 1.1.1.40) low > 90
Castellaniella sp019104865 MT123 0.48 ABCV34_RS01765 4-aminobutyrate--2-oxoglutarate transaminase 0.60 ABCV34_RS01715 NADP-dependent malic enzyme low > 48
Rahnella sp. WP5 0.48 EX31_RS00095 4-aminobutyrate--2-oxoglutarate transaminase 0.87 EX31_RS20275 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 89
Rhodanobacter denitrificans MT42 0.31 LRK55_RS04275 acetyl ornithine aminotransferase family protein 0.58 LRK55_RS10875 NADP-dependent malic enzyme — —
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS04500 acetyl ornithine aminotransferase family protein 0.58 LRK54_RS11170 NADP-dependent malic enzyme 0.23 44
Lysobacter sp. OAE881 0.24 ABIE51_RS02780 aspartate aminotransferase family protein 0.60 ABIE51_RS18820 NADP-dependent malic enzyme low > 62

Not shown: 21 genomes with orthologs for GFF1567 only; 24 genomes with orthologs for GFF2198 only