Conservation of cofitness between Psest_0175 and Psest_2000 in Pseudomonas stutzeri RCH2

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0175 Xaa-Pro aminopeptidase 1.0 Psest_2000 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.34 19
Pseudomonas sp. S08-1 0.93 OH686_11205 Xaa-Pro aminopeptidase 0.79 OH686_20835 Oxidoreductase, short-chain dehydrogenase/reductase family 0.66 73
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_2229 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.82 Pf1N1B4_358 Oxidoreductase, short chain dehydrogenase/reductase family low > 87
Pseudomonas putida KT2440 0.85 PP_5200 proline aminopeptidase P II 0.79 PP_1763 putative oxidoreductase low > 96
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_4480 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.81 Pf6N2E2_2527 Oxidoreductase, short chain dehydrogenase/reductase family low > 103
Pseudomonas simiae WCS417 0.83 PS417_27285 Xaa-Pro aminopeptidase 0.80 PS417_08090 3-oxoacyl-ACP reductase low > 88
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_08760 Xaa-Pro aminopeptidase 0.82 AO353_02105 3-oxoacyl-ACP reductase — —
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_0321 aminopeptidase P, Metallo peptidase, MEROPS family M24B 0.65 Psyr_3652 Short-chain dehydrogenase/reductase SDR low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_0321 aminopeptidase P, Metallo peptidase, MEROPS family M24B 0.65 Psyr_3652 Short-chain dehydrogenase/reductase SDR low > 86
Pseudomonas fluorescens SBW25 0.83 PFLU_RS28945 Xaa-Pro aminopeptidase 0.80 PFLU_RS08060 YciK family oxidoreductase low > 109
Pseudomonas sp. RS175 0.83 PFR28_04321 Xaa-Pro aminopeptidase 0.80 PFR28_00899 putative oxidoreductase YciK — —
Pseudomonas fluorescens SBW25-INTG 0.83 PFLU_RS28945 Xaa-Pro aminopeptidase 0.80 PFLU_RS08060 YciK family oxidoreductase low > 109
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_13010 Xaa-Pro aminopeptidase 0.82 AO356_03500 3-oxoacyl-ACP reductase low > 104
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_896 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.83 PfGW456L13_2169 Oxidoreductase, short chain dehydrogenase/reductase family low > 87
Marinobacter adhaerens HP15 0.68 HP15_3203 proline aminopeptidase P II 0.59 HP15_1225 oxidoreductase, short chain dehydrogenase/reductase family low > 73
Kangiella aquimarina DSM 16071 0.56 B158DRAFT_0533 Xaa-Pro aminopeptidase 0.61 B158DRAFT_2314 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) low > 40
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS11970 aminopeptidase P N-terminal domain-containing protein 0.29 ABZR86_RS09815 SDR family NAD(P)-dependent oxidoreductase low > 74
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.1147.1 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.24 Xcc-8004.2015.1 Short chain dehydrogenase low > 74
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS11695 aminopeptidase P N-terminal domain-containing protein 0.34 LRK54_RS13830 SDR family NAD(P)-dependent oxidoreductase low > 59
Rhodanobacter denitrificans MT42 0.54 LRK55_RS11420 aminopeptidase P N-terminal domain-containing protein 0.34 LRK55_RS13545 SDR family NAD(P)-dependent oxidoreductase low > 63
Lysobacter sp. OAE881 0.54 ABIE51_RS17320 aminopeptidase P N-terminal domain-containing protein 0.28 ABIE51_RS15375 SDR family NAD(P)-dependent oxidoreductase low > 62
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_12200 pepP Xaa-Pro aminopeptidase 0.34 OKGIIK_03065 yqjQ Short-chain dehydrogenase low > 52
Acinetobacter radioresistens SK82 0.52 MPMX26_02286 Xaa-Pro aminopeptidase 0.51 MPMX26_00032 putative oxidoreductase YciK low > 36
Klebsiella michiganensis M5al 0.48 BWI76_RS23895 Xaa-Pro aminopeptidase 0.45 BWI76_RS11905 NAD(P)-dependent oxidoreductase — —
Dickeya dadantii 3937 0.48 DDA3937_RS02395 Xaa-Pro aminopeptidase 0.46 DDA3937_RS10510 YciK family oxidoreductase low > 74
Escherichia coli Nissle 1917 0.48 ECOLIN_RS16190 Xaa-Pro aminopeptidase 0.45 ECOLIN_RS07645 YciK family oxidoreductase — —
Escherichia fergusonii Becca 0.48 EFB2_00994 Xaa-Pro aminopeptidase 0.45 EFB2_02656 putative oxidoreductase YciK low > 86
Dickeya dianthicola ME23 0.47 DZA65_RS02455 Xaa-Pro aminopeptidase 0.45 DZA65_RS10990 YciK family oxidoreductase low > 75
Dickeya dianthicola 67-19 0.47 HGI48_RS02350 Xaa-Pro aminopeptidase 0.46 HGI48_RS10510 YciK family oxidoreductase low > 71
Escherichia coli ECOR27 0.47 NOLOHH_11415 pepP Xaa-Pro aminopeptidase 0.45 NOLOHH_20285 yciK YciK family oxidoreductase — —
Escherichia coli ECOR38 0.47 HEPCGN_18795 pepP Xaa-Pro aminopeptidase 0.44 HEPCGN_25580 yciK YciK family oxidoreductase low > 85
Serratia liquefaciens MT49 0.47 IAI46_20875 Xaa-Pro aminopeptidase 0.43 IAI46_13985 YciK family oxidoreductase low > 86
Escherichia coli ECRC62 0.47 BNILDI_09950 pepP Xaa-Pro aminopeptidase 0.45 BNILDI_18435 yciK YciK family oxidoreductase — —
Escherichia coli BL21 0.47 ECD_02740 proline aminopeptidase P II 0.45 ECD_01247 putative EmrKY-TolC system oxoacyl-(acyl carrier protein) reductase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_00807 Xaa-Pro aminopeptidase 0.44 OHPLBJKB_02413 putative oxidoreductase YciK low > 73
Escherichia coli ECRC101 0.47 OKFHMN_19505 pepP Xaa-Pro aminopeptidase 0.44 OKFHMN_02620 yciK YciK family oxidoreductase — —
Escherichia coli ECRC101 0.47 MCAODC_10025 pepP Xaa-Pro aminopeptidase 0.44 MCAODC_15645 yciK YciK family oxidoreductase — —
Escherichia coli ECRC99 0.47 KEDOAH_08635 pepP Xaa-Pro aminopeptidase 0.44 KEDOAH_26145 yciK YciK family oxidoreductase — —
Escherichia coli ECRC98 0.47 JDDGAC_23145 pepP Xaa-Pro aminopeptidase 0.44 JDDGAC_05165 yciK YciK family oxidoreductase — —
Escherichia coli ECRC102 0.47 NIAGMN_17270 pepP Xaa-Pro aminopeptidase 0.44 NIAGMN_26790 yciK YciK family oxidoreductase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF3009 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.46 GFF2717 YciK-like oxidoreductase low > 78
Escherichia coli BW25113 0.47 b2908 pepP proline aminopeptidase P II (NCBI) 0.45 b1271 yciK short chain dehydrogenase (NCBI) low > 76
Pectobacterium carotovorum WPP14 0.47 HER17_RS19115 Xaa-Pro aminopeptidase 0.44 HER17_RS10890 YciK family oxidoreductase low > 75
Enterobacter asburiae PDN3 0.47 EX28DRAFT_2960 Xaa-Pro aminopeptidase 0.45 EX28DRAFT_0942 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) low > 76
Pantoea sp. MT58 0.47 IAI47_03750 Xaa-Pro aminopeptidase 0.43 IAI47_09220 YciK family oxidoreductase low > 76
Enterobacter sp. TBS_079 0.46 MPMX20_03767 Xaa-Pro aminopeptidase 0.46 MPMX20_02505 putative oxidoreductase YciK low > 85
Alteromonas macleodii MIT1002 0.46 MIT1002_02984 Xaa-Pro aminopeptidase 0.55 MIT1002_01965 putative oxidoreductase YciK low > 70
Erwinia tracheiphila SCR3 0.46 LU632_RS05880 pepP Xaa-Pro aminopeptidase 0.43 LU632_RS12725 YciK family oxidoreductase low > 74
Rahnella sp. WP5 0.45 EX31_RS21495 Xaa-Pro aminopeptidase 0.47 EX31_RS09910 YciK family oxidoreductase low > 89
Shewanella loihica PV-4 0.39 Shew_2358 peptidase M24 (RefSeq) 0.60 Shew_2409 short chain dehydrogenase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.39 Sama_1534 xaa-pro aminopeptidase (RefSeq) 0.55 Sama_2121 short chain dehydrogenase (RefSeq) low > 62

Not shown: 30 genomes with orthologs for Psest_0175 only; 15 genomes with orthologs for Psest_2000 only