Conservation of cofitness between Psest_1818 and Psest_1825 in Pseudomonas stutzeri RCH2

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1818 GDP-mannose 4,6-dehydratase 1.0 Psest_1825 Predicted nucleoside-diphosphate sugar epimerases 0.72 3
Enterobacter asburiae PDN3 0.84 EX28DRAFT_0502 GDP-mannose 4,6-dehydratase 0.46 EX28DRAFT_0519 Predicted nucleoside-diphosphate sugar epimerases low > 76
Pseudomonas fluorescens SBW25 0.84 PFLU_RS17890 GDP-mannose 4,6-dehydratase 0.75 PFLU_RS08190 polysaccharide biosynthesis protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS17890 GDP-mannose 4,6-dehydratase 0.75 PFLU_RS08190 polysaccharide biosynthesis protein low > 109
Dickeya dianthicola 67-19 0.84 HGI48_RS18595 GDP-mannose 4,6-dehydratase 0.41 HGI48_RS03510 polysaccharide biosynthesis protein 0.82 11
Dickeya dianthicola ME23 0.84 DZA65_RS19730 GDP-mannose 4,6-dehydratase 0.41 DZA65_RS03625 polysaccharide biosynthesis protein 0.96 6
Vibrio cholerae E7946 ATCC 55056 0.83 CSW01_01280 GDP-mannose 4,6-dehydratase 0.40 CSW01_01350 polysaccharide biosynthesis protein 1.00 11
Dickeya dadantii 3937 0.83 DDA3937_RS18665 GDP-mannose 4,6-dehydratase 0.41 DDA3937_RS03410 polysaccharide biosynthesis protein 0.85 4
Hydrogenophaga sp. GW460-11-11-14-LB1 0.81 GFF2554 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.46 GFF1865 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) low > 90
Cupriavidus basilensis FW507-4G11 0.80 RR42_RS33235 GDP-mannose 4,6-dehydratase 0.45 RR42_RS15825 capsular biosynthesis protein low > 128
Paraburkholderia sabiae LMG 24235 0.73 QEN71_RS26360 GDP-mannose 4,6-dehydratase 0.28 QEN71_RS25590 nucleoside-diphosphate sugar epimerase/dehydratase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.72 H281DRAFT_04776 GDPmannose 4,6-dehydratase 0.28 H281DRAFT_04851 NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC low > 103
Burkholderia phytofirmans PsJN 0.72 BPHYT_RS04000 GDP-mannose 4,6-dehydratase 0.28 BPHYT_RS04385 nucleoside-diphosphate sugar oxidoreductase low > 109
Paraburkholderia graminis OAS925 0.71 ABIE53_000940 GDPmannose 4,6-dehydratase 0.28 ABIE53_001163 FlaA1/EpsC-like NDP-sugar epimerase low > 113
Castellaniella sp019104865 MT123 0.71 ABCV34_RS12935 GDP-mannose 4,6-dehydratase 0.26 ABCV34_RS13035 nucleoside-diphosphate sugar epimerase/dehydratase
Dechlorosoma suillum PS 0.71 Dsui_0085 GDP-mannose 4,6-dehydratase 0.28 Dsui_0400 putative nucleoside-diphosphate sugar epimerase 0.77 25
Rhodanobacter denitrificans MT42 0.70 LRK55_RS03650 GDP-mannose 4,6-dehydratase 0.26 LRK55_RS17915 nucleoside-diphosphate sugar epimerase/dehydratase low > 63
Pedobacter sp. GW460-11-11-14-LB5 0.69 CA265_RS19210 GDP-mannose 4,6-dehydratase 0.26 CA265_RS19185 polysaccharide biosynthesis protein
Mucilaginibacter yixingensis YX-36 DSM 26809 0.67 ABZR88_RS18375 GDP-mannose 4,6-dehydratase 0.26 ABZR88_RS08860 polysaccharide biosynthesis protein
Azospirillum sp. SherDot2 0.63 MPMX19_06644 GDP-mannose 4,6-dehydratase 0.25 MPMX19_01807 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase
Rhodospirillum rubrum S1H 0.63 Rru_A0253 GDP-mannose 4,6-dehydratase (NCBI) 0.23 Rru_A3656 Polysaccharide biosynthesis protein CapD (NCBI)
Magnetospirillum magneticum AMB-1 0.62 AMB_RS05505 GDP-mannose 4,6-dehydratase 0.25 AMB_RS00500 polysaccharide biosynthesis protein
Bacteroides ovatus ATCC 8483 0.61 BACOVA_00511 GDP-mannose 4,6-dehydratase 0.24 BACOVA_03688 polysaccharide biosynthesis protein low > 94
Bacteroides thetaiotaomicron VPI-5482 0.61 BT1224 GDP-mannose 4,6-dehydratase (NCBI ptt file) 0.24 BT0378 capsular polysaccharide biosynthesis protein capD (NCBI ptt file)
Phocaeicola dorei CL03T12C01 0.60 ABI39_RS20410 GDP-mannose 4,6-dehydratase 0.25 ABI39_RS13770 polysaccharide biosynthesis protein low > 72
Ralstonia solanacearum PSI07 0.47 RPSI07_RS19840 GDP-mannose 4,6-dehydratase 0.37 RPSI07_RS04445 polysaccharide biosynthesis protein 0.48 38
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_0916 GDP-mannose 4,6-dehydratase 0.74 Psyr_3636 Polysaccharide biosynthesis protein CapD 0.92 2
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_0916 GDP-mannose 4,6-dehydratase 0.74 Psyr_3636 Polysaccharide biosynthesis protein CapD 0.86 2
Pseudomonas putida KT2440 0.47 PP_1799 GDP-mannose 4,6-dehydratase 0.73 PP_1805 Polysaccharide biosynthesis protein 0.98 2
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.4503.1 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.25 Xcc-8004.2386.1 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) 0.85 7
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_01210 gmd GDP-mannose 4,6-dehydratase 0.27 OKGIIK_07240 flaA1 polysaccharide biosynthesis protein 0.73 9
Variovorax sp. OAS795 0.45 ABID97_RS05705 GDP-mannose 4,6-dehydratase 0.38 ABID97_RS02200 nucleoside-diphosphate sugar epimerase/dehydratase low > 91
Bosea sp. OAE506 0.45 ABIE41_RS02910 GDP-mannose 4,6-dehydratase 0.18 ABIE41_RS03855 nucleoside-diphosphate sugar epimerase/dehydratase
Rhodopseudomonas palustris CGA009 0.44 TX73_020470 GDP-mannose 4,6-dehydratase 0.20 TX73_020640 nucleoside-diphosphate sugar epimerase/dehydratase low > 86
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_10245 GDP-mannose 4,6-dehydratase 0.76 AO353_01970 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_4242 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.74 Pf6N2E2_2506 nucleotide sugar epimerase/dehydratase WbpM low > 103
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_11835 GDP-mannose 4,6-dehydratase 0.75 AO356_03345 hypothetical protein low > 104
Pseudomonas sp. RS175 0.40 PFR28_04554 GDP-mannose 4,6-dehydratase 0.75 PFR28_00932 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 88
Pseudomonas sp. S08-1 0.40 OH686_11980 GDP-mannose 4,6-dehydratase 0.75 OH686_20915 nucleotide sugar epimerase/dehydratase WbpM 0.88 24
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_2338 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.77 PfGW456L13_2191 nucleotide sugar epimerase/dehydratase WbpM low > 87
Rhodanobacter denitrificans FW104-10B01 0.13 LRK54_RS05640 GDP-mannose 4,6-dehydratase 0.26 LRK54_RS18060 polysaccharide biosynthesis protein 0.70 8

Not shown: 34 genomes with orthologs for Psest_1818 only; 16 genomes with orthologs for Psest_1825 only