Conservation of cofitness between GFF2932 and GFF1773 in Variovorax sp. SCN45

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF2932 Uncharacterized protein YeaG 1.0 GFF1773 D-amino acid dehydrogenase (EC 1.4.99.6) 0.76 19
Variovorax sp. OAS795 0.99 ABID97_RS10270 PrkA family serine protein kinase 0.94 ABID97_RS22385 D-amino acid dehydrogenase low > 91
Paraburkholderia bryophila 376MFSha3.1 0.88 H281DRAFT_05232 putative serine protein kinase, PrkA 0.62 H281DRAFT_04287 D-amino-acid dehydrogenase low > 103
Paraburkholderia graminis OAS925 0.88 ABIE53_002318 serine protein kinase 0.61 ABIE53_003133 D-amino-acid dehydrogenase low > 113
Burkholderia phytofirmans PsJN 0.87 BPHYT_RS11190 PrkA family serine protein kinase 0.61 BPHYT_RS14790 D-amino acid dehydrogenase low > 109
Paraburkholderia sabiae LMG 24235 0.87 QEN71_RS07375 PrkA family serine protein kinase 0.62 QEN71_RS04190 D-amino acid dehydrogenase low > 153
Herbaspirillum seropedicae SmR1 0.85 HSERO_RS21690 PrkA family serine protein kinase 0.63 HSERO_RS08375 D-amino acid dehydrogenase small subunit low > 78
Ralstonia sp. UNC404CL21Col 0.82 ABZR87_RS14220 PrkA family serine protein kinase 0.63 ABZR87_RS09560 D-amino acid dehydrogenase low > 80
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS36485 serine/threonine protein kinase 0.63 RR42_RS04585 amino acid dehydrogenase low > 128
Pseudomonas putida KT2440 0.80 PP_0397 protein kinase 0.67 PP_4434 D-amino acid dehydrogenase 1 small subunit low > 96
Pseudomonas stutzeri RCH2 0.80 Psest_3672 Putative Ser protein kinase 0.65 Psest_3793 D-alanine dehydrogenase (EC 1.4.99.-) (from data) low > 67
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_4631 PrkA serine kinase 0.65 Psyr_0235 D-amino acid dehydrogenase small subunit low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_4631 PrkA serine kinase 0.65 Psyr_0235 D-amino acid dehydrogenase small subunit low > 86
Pseudomonas sp. S08-1 0.80 OH686_15020 Uncharacterized protein YeaG 0.67 OH686_13685 D-amino acid dehydrogenase low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF3473 Serine protein kinase (prkA protein), P-loop containing 0.61 GFF2804 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) low > 78
Klebsiella michiganensis M5al 0.79 BWI76_RS11485 serine protein kinase PrkA 0.62 BWI76_RS17735 D-amino acid dehydrogenase small subunit low > 92
Enterobacter sp. TBS_079 0.79 MPMX20_01840 hypothetical protein 0.61 MPMX20_02699 D-amino acid dehydrogenase low > 85
Escherichia coli ECRC99 0.79 KEDOAH_01400 yeaG protein kinase YeaG 0.61 KEDOAH_25305 dadA D-amino acid dehydrogenase — —
Escherichia coli ECOR27 0.79 NOLOHH_17240 yeaG protein kinase YeaG 0.61 NOLOHH_20725 dadA D-amino acid dehydrogenase 0.52 16
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_01949 hypothetical protein 0.61 OHPLBJKB_02500 D-amino acid dehydrogenase low > 73
Escherichia coli ECRC98 0.79 JDDGAC_01285 yeaG protein kinase YeaG 0.61 JDDGAC_06220 dadA D-amino acid dehydrogenase — —
Escherichia coli ECRC62 0.79 BNILDI_16025 yeaG protein kinase YeaG 0.61 BNILDI_18890 dadA D-amino acid dehydrogenase low > 75
Escherichia coli ECOR38 0.79 HEPCGN_05100 yeaG protein kinase YeaG 0.61 HEPCGN_24750 dadA D-amino acid dehydrogenase low > 87
Escherichia coli BW25113 0.79 b1783 yeaG yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.61 b1189 dadA D-amino acid dehydrogenase (quinone) DadA (EC 1.4.5.1) (from data) low > 76
Escherichia fergusonii Becca 0.79 EFB2_02211 hypothetical protein 0.61 EFB2_02743 D-amino acid dehydrogenase low > 86
Escherichia coli ECRC102 0.79 NIAGMN_01355 yeaG protein kinase YeaG 0.61 NIAGMN_27930 dadA D-amino acid dehydrogenase — —
Escherichia coli ECRC100 0.79 OKFHMN_26710 yeaG protein kinase YeaG 0.61 OKFHMN_28290 dadA D-amino acid dehydrogenase — —
Escherichia coli ECRC101 0.79 MCAODC_18700 yeaG protein kinase YeaG 0.61 MCAODC_21880 dadA D-amino acid dehydrogenase low > 87
Enterobacter asburiae PDN3 0.79 EX28DRAFT_1776 putative serine protein kinase, PrkA 0.62 EX28DRAFT_0766 Glycine/D-amino acid oxidases (deaminating) low > 76
Escherichia coli Nissle 1917 0.79 ECOLIN_RS09940 protein kinase YeaG 0.61 ECOLIN_RS07185 D-amino acid dehydrogenase — —
Dickeya dadantii 3937 0.79 DDA3937_RS10245 PrkA family serine protein kinase 0.62 DDA3937_RS11170 D-amino acid dehydrogenase low > 74
Dickeya dianthicola ME23 0.79 DZA65_RS10730 PrkA family serine protein kinase 0.62 DZA65_RS11540 D-amino acid dehydrogenase low > 75
Pantoea sp. MT58 0.79 IAI47_08925 protein kinase YeaG 0.63 IAI47_08890 D-amino acid dehydrogenase low > 76
Erwinia tracheiphila SCR3 0.79 LU632_RS13010 yeaG PrkA family serine protein kinase 0.59 LU632_RS13070 D-amino acid dehydrogenase low > 74
Dickeya dianthicola 67-19 0.78 HGI48_RS10255 PrkA family serine protein kinase 0.62 HGI48_RS11195 D-amino acid dehydrogenase low > 71
Pectobacterium carotovorum WPP14 0.78 HER17_RS11150 protein kinase YeaG 0.61 HER17_RS11170 D-amino acid dehydrogenase low > 75
Rahnella sp. WP5 0.78 EX31_RS06260 protein kinase YeaG 0.64 EX31_RS10485 D-amino acid dehydrogenase low > 89
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_4801 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.65 Pf6N2E2_4391 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) low > 103
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_1196 Serine protein kinase (prkA protein), P-loop containing 0.65 PfGW456L13_812 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) low > 87
Pseudomonas fluorescens FW300-N1B4 0.78 Pf1N1B4_2523 Serine protein kinase (prkA protein), P-loop containing 0.65 Pf1N1B4_2144 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) low > 87
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_07335 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.65 AO353_09155 amino acid dehydrogenase low > 101
Serratia liquefaciens MT49 0.78 IAI46_14375 protein kinase YeaG 0.62 IAI46_14460 D-amino acid dehydrogenase low > 86
Pseudomonas sp. RS175 0.78 PFR28_04068 hypothetical protein 0.65 PFR28_04399 D-amino acid dehydrogenase 1 low > 88
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_14315 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.65 AO356_12620 amino acid dehydrogenase low > 104
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS27485 PrkA family serine protein kinase 0.64 PFLU_RS29380 D-amino acid dehydrogenase 0.41 18
Vibrio cholerae E7946 ATCC 55056 0.78 CSW01_09380 PrkA family serine protein kinase 0.54 CSW01_04065 D-amino acid dehydrogenase small subunit low > 62
Pseudomonas fluorescens SBW25 0.78 PFLU_RS27485 PrkA family serine protein kinase 0.64 PFLU_RS29380 D-amino acid dehydrogenase 0.39 67
Pseudomonas simiae WCS417 0.78 PS417_25830 serine/threonine protein kinase 0.64 PS417_27705 amino acid dehydrogenase low > 88
Escherichia coli BL21 0.76 ECD_01752 protein kinase, endogenous substrate unidentified; autokinase 0.61 ECD_01164 D-amino acid dehydrogenase low > 61
Azospirillum sp. SherDot2 0.71 MPMX19_02157 hypothetical protein 0.60 MPMX19_06097 D-amino acid dehydrogenase 1 low > 112
Castellaniella sp019104865 MT123 0.15 ABCV34_RS05540 serine protein kinase 0.61 ABCV34_RS10810 D-amino acid dehydrogenase low > 48

Not shown: 12 genomes with orthologs for GFF2932 only; 17 genomes with orthologs for GFF1773 only