Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF3835 | | Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) | 1.0 | GFF1715 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | 0.69 | 10 |
Variovorax sp. SCN45 | 0.75 | GFF2868 | | Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) | 0.82 | GFF2008 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | low | > 127 |
Variovorax sp. OAS795 | 0.74 | ABID97_RS10600 | | D-glycerate dehydrogenase | 0.81 | ABID97_RS25130 | | carboxyl transferase domain-containing protein | low | > 91 |
Acidovorax sp. GW101-3H11 | 0.73 | Ac3H11_2599 | | Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) | 0.82 | Ac3H11_3010 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | — | — |
Cupriavidus basilensis FW507-4G11 | 0.66 | RR42_RS14190 | | 2-hydroxyacid dehydrogenase | 0.80 | RR42_RS26905 | | methylcrotonoyl-CoA carboxylase | low | > 128 |
Ralstonia solanacearum GMI1000 | 0.64 | RS_RS21645 | | D-glycerate dehydrogenase | 0.78 | RS_RS01320 | | methylcrotonoyl-CoA carboxylase | low | > 80 |
Ralstonia solanacearum PSI07 | 0.62 | RPSI07_RS02805 | | D-glycerate dehydrogenase | 0.78 | RPSI07_RS22835 | | methylcrotonoyl-CoA carboxylase | low | > 81 |
Paraburkholderia sabiae LMG 24235 | 0.61 | QEN71_RS04460 | | D-glycerate dehydrogenase | 0.80 | QEN71_RS12865 | | carboxyl transferase domain-containing protein | low | > 153 |
Burkholderia phytofirmans PsJN | 0.61 | BPHYT_RS14520 | | 2-hydroxyacid dehydrogenase | 0.80 | BPHYT_RS23265 | | methylcrotonoyl-CoA carboxylase | low | > 109 |
Ralstonia sp. UNC404CL21Col | 0.61 | ABZR87_RS10055 | | D-glycerate dehydrogenase | 0.78 | ABZR87_RS06280 | | carboxyl transferase domain-containing protein | low | > 80 |
Paraburkholderia graminis OAS925 | 0.60 | ABIE53_003066 | | gluconate 2-dehydrogenase | 0.80 | ABIE53_005466 | | 3-methylcrotonyl-CoA carboxylase beta subunit | low | > 113 |
Paraburkholderia bryophila 376MFSha3.1 | 0.60 | H281DRAFT_04333 | | Lactate dehydrogenase | 0.79 | H281DRAFT_01345 | | 3-methylcrotonyl-CoA carboxylase beta subunit | low | > 103 |
Herbaspirillum seropedicae SmR1 | 0.60 | HSERO_RS08110 | | 2-hydroxyacid dehydrogenase | 0.80 | HSERO_RS23455 | | methylcrotonoyl-CoA carboxylase | low | > 78 |
Ralstonia solanacearum IBSBF1503 | 0.58 | RALBFv3_RS14340 | | D-glycerate dehydrogenase | 0.78 | RALBFv3_RS10480 | | methylcrotonoyl-CoA carboxylase | low | > 76 |
Ralstonia solanacearum UW163 | 0.58 | UW163_RS11805 | | D-glycerate dehydrogenase | 0.78 | UW163_RS03100 | | methylcrotonoyl-CoA carboxylase | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.56 | Xcc-8004.1956.1 | | Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) | 0.72 | Xcc-8004.319.1 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | low | > 74 |
Lysobacter sp. OAE881 | 0.52 | ABIE51_RS08225 | | D-glycerate dehydrogenase | 0.71 | ABIE51_RS13160 | | carboxyl transferase domain-containing protein | low | > 62 |
Dyella japonica UNC79MFTsu3.2 | 0.51 | ABZR86_RS08035 | | D-glycerate dehydrogenase | 0.75 | ABZR86_RS20580 | | carboxyl transferase domain-containing protein | low | > 74 |
Rhodanobacter sp. FW510-T8 | 0.50 | OKGIIK_04810 | | D-glycerate dehydrogenase | 0.74 | OKGIIK_04015 | | Methylcrotonoyl-CoA carboxylase | low | > 52 |
Pseudomonas simiae WCS417 | 0.38 | PS417_12555 | | phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) | 0.71 | PS417_17020 | | methylcrotonoyl-CoA carboxylase | — | — |
Pseudomonas sp. RS175 | 0.36 | PFR28_01596 | | Glyoxylate/hydroxypyruvate reductase B | 0.70 | PFR28_01259 | | Methylmalonyl-CoA carboxyltransferase 12S subunit | low | > 88 |
Pseudomonas fluorescens FW300-N2E2 | 0.36 | Pf6N2E2_5310 | | Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) | 0.70 | Pf6N2E2_2192 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | low | > 103 |
Pseudomonas fluorescens GW456-L13 | 0.36 | PfGW456L13_2948 | | 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) | 0.71 | PfGW456L13_2590 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | low | > 87 |
Pseudomonas putida KT2440 | 0.36 | PP_3376 | | putative phosphonate dehydrogenase | 0.70 | PP_4065 | | methylcrotonyl-CoA carboxylase biotin-containing subunit beta | low | > 96 |
Pseudomonas fluorescens FW300-N2C3 | 0.36 | AO356_16925 | | bifunctional glyoxylate/hydroxypyruvate reductase B | 0.71 | AO356_01585 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | 0.29 | 48 |
Pseudomonas syringae pv. syringae B728a | 0.35 | Psyr_1043 | | D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein | 0.69 | Psyr_2469 | | Propionyl-CoA carboxylase | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.35 | Psyr_1043 | | D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein | 0.69 | Psyr_2469 | | Propionyl-CoA carboxylase | low | > 86 |
Azospirillum sp. SherDot2 | 0.35 | MPMX19_02367 | | Glycerate dehydrogenase | 0.74 | MPMX19_03938 | | Methylmalonyl-CoA carboxyltransferase 12S subunit | low | > 112 |
Rhizobium sp. OAE497 | 0.34 | ABIE40_RS14685 | | D-glycerate dehydrogenase | 0.73 | ABIE40_RS20780 | | carboxyl transferase domain-containing protein | low | > 107 |
Azospirillum brasilense Sp245 | 0.34 | AZOBR_RS01325 | | 2-hydroxyacid dehydrogenase | 0.74 | AZOBR_RS22295 | | methylcrotonoyl-CoA carboxylase | low | > 97 |
Agrobacterium fabrum C58 | 0.33 | Atu0077 | | D-isomer specific 2-hydroxyacid dehydrogenases family protein | 0.72 | Atu3478 | | 3-methylcrotonoyl-CoA carboxylase beta subunit | low | > 89 |
Acinetobacter radioresistens SK82 | 0.33 | MPMX26_01125 | | Glyoxylate/hydroxypyruvate reductase B | 0.74 | MPMX26_00631 | | Propionyl-CoA carboxylase beta chain | — | — |
Rhodospirillum rubrum S1H | 0.32 | Rru_A1815 | | Glycolate reductase (NCBI) | 0.70 | Rru_A1943 | | Propionyl-CoA carboxylase (NCBI) | low | > 58 |
Castellaniella sp019104865 MT123 | 0.31 | ABCV34_RS08615 | | D-glycerate dehydrogenase | 0.75 | ABCV34_RS12355 | | carboxyl transferase domain-containing protein | low | > 48 |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.31 | A4249_RS12365 | | D-glycerate dehydrogenase | 0.67 | A4249_RS03795 | | carboxyl transferase domain-containing protein | low | > 48 |
Pedobacter sp. GW460-11-11-14-LB5 | 0.25 | CA265_RS17230 | | D-glycerate dehydrogenase | 0.47 | CA265_RS10640 | | methylcrotonoyl-CoA carboxylase | low | > 88 |
Dechlorosoma suillum PS | 0.21 | Dsui_0124 | | lactate dehydrogenase-like oxidoreductase | 0.75 | Dsui_0980 | | acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) | low | > 51 |
Not shown: 25 genomes with orthologs for GFF3835 only; 29 genomes with orthologs for GFF1715 only