| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Echinicola vietnamensis KMM 6221, DSM 17526 | 1.0 | Echvi_1243 | | glutamate synthases, NADH/NADPH, small subunit | 1.0 | Echvi_3865 | | FAD/FMN-containing dehydrogenases | 0.89 | 18 |
| Vibrio cholerae E7946 ATCC 55056 | 0.56 | CSW01_12025 | | glutamate synthase subunit beta | 0.20 | CSW01_06060 | | FAD-binding oxidoreductase | 0.52 | 2 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.56 | ABZR88_RS06910 | | glutamate synthase subunit beta | 0.10 | ABZR88_RS15005 | | FAD-binding and (Fe-S)-binding domain-containing protein | low | > 71 |
| Paraburkholderia sabiae LMG 24235 | 0.52 | QEN71_RS28005 | | glutamate synthase subunit beta | 0.29 | QEN71_RS17020 | | FAD-binding and (Fe-S)-binding domain-containing protein | low | > 153 |
| Variovorax sp. OAS795 | 0.52 | ABID97_RS23220 | | glutamate synthase subunit beta | 0.29 | ABID97_RS15850 | | FAD-linked oxidase C-terminal domain-containing protein | low | > 91 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.51 | H281DRAFT_05621 | | glutamate synthase (NADH) small subunit | 0.29 | H281DRAFT_03563 | | FAD/FMN-containing dehydrogenase | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.51 | BPHYT_RS17850 | | dihydropyrimidine dehydrogenase subunit A | 0.29 | BPHYT_RS34425 | | lactate dehydrogenase | — | — |
| Paraburkholderia graminis OAS925 | 0.51 | ABIE53_003732 | | glutamate synthase (NADPH/NADH) small chain | 0.29 | ABIE53_004693 | | FAD/FMN-containing dehydrogenase/Fe-S oxidoreductase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.51 | RR42_RS18985 | | glutamate synthase | 0.29 | RR42_RS30390 | | lactate dehydrogenase | low | > 128 |
| Variovorax sp. SCN45 | 0.49 | GFF5333 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.29 | GFF1371 | | Fe-S protein, homolog of lactate dehydrogenase SO1521 | low | > 127 |
| Rhizobium sp. OAE497 | 0.44 | ABIE40_RS16270 | | glutamate synthase subunit beta | 0.20 | ABIE40_RS21040 | | FAD-binding and (Fe-S)-binding domain-containing protein | — | — |
| Bacteroides stercoris CC31F | 0.37 | HMPREF1181_RS16050 | | glutamate synthase subunit beta | 0.08 | HMPREF1181_RS03030 | | FAD-binding oxidoreductase | low | > 56 |
| Rhodospirillum rubrum S1H | 0.25 | Rru_A0018 | | Glutamate synthase, NADH/NADPH, small subunit 2 (NCBI) | 0.19 | Rru_A2060 | | FAD linked oxidase (NCBI) | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.24 | Pf1N1B4_1533 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.20 | Pf1N1B4_4229 | | Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.24 | AO356_09370 | | glutamate synthase | 0.21 | AO356_29050 | | hypothetical protein | low | > 104 |
| Pseudomonas sp. RS175 | 0.24 | PFR28_05016 | | Glutamate synthase [NADPH] small chain | 0.21 | PFR28_01530 | | hypothetical protein | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.24 | Pf6N2E2_3751 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.07 | Pf6N2E2_3385 | | Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.24 | AO353_12520 | | glutamate synthase | 0.07 | AO353_05720 | | 4Fe-4S ferredoxin | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.24 | PfGW456L13_271 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.07 | PfGW456L13_5118 | | D-lactate dehydrogenase (quinone), FeS subunit (EC 1.1.5.12) (from data) | low | > 87 |
| Pseudomonas simiae WCS417 | 0.23 | PS417_02005 | | glutamate synthase | 0.07 | PS417_24110 | | 4Fe-4S ferredoxin | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.23 | PFLU_RS02050 | | NAD(P)-binding protein | 0.07 | PFLU_RS25950 | | FAD-binding oxidoreductase | low | > 109 |
| Dinoroseobacter shibae DFL-12 | 0.23 | Dshi_0001 | | glutamate synthase, small subunit (RefSeq) | 0.28 | Dshi_3324 | | FAD linked oxidase domain protein (RefSeq) | low | > 64 |
| Serratia liquefaciens MT49 | 0.23 | IAI46_22350 | | glutamate synthase small subunit | 0.21 | IAI46_11130 | | FAD-binding oxidoreductase | 0.70 | 41 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.23 | Psyr_0412 | | glutamate synthase (NADPH) small subunit | 0.21 | Psyr_2533 | | FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal | low | > 86 |
| Pseudomonas fluorescens SBW25 | 0.23 | PFLU_RS02050 | | NAD(P)-binding protein | 0.07 | PFLU_RS25950 | | FAD-binding oxidoreductase | low | > 109 |
| Pseudomonas syringae pv. syringae B728a | 0.23 | Psyr_0412 | | glutamate synthase (NADPH) small subunit | 0.21 | Psyr_2533 | | FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal | low | > 86 |
| Pseudomonas putida KT2440 | 0.23 | PP_5075 | | glutamate synthase (NADPH) beta subunit | 0.21 | PP_4493 | | D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) | low | > 96 |
| Escherichia coli Nissle 1917 | 0.23 | ECOLIN_RS18480 | | glutamate synthase subunit GltD | 0.21 | ECOLIN_RS09430 | | FAD-binding and (Fe-S)-binding domain-containing protein | low | > 52 |
| Escherichia coli ECOR27 | 0.23 | NOLOHH_09680 | gltD | glutamate synthase subunit GltD | 0.21 | NOLOHH_17750 | ydiJ | Uncharacterized protein YdiJ | — | — |
| Escherichia coli ECRC102 | 0.23 | NIAGMN_15640 | gltD | glutamate synthase subunit GltD | 0.21 | NIAGMN_00835 | ydiJ | Uncharacterized protein YdiJ | — | — |
| Shewanella loihica PV-4 | 0.23 | Shew_1031 | gltD | glutamate synthase subunit beta (RefSeq) | 0.21 | Shew_1550 | | FAD linked oxidase domain-containing protein (RefSeq) | low | > 60 |
| Escherichia coli ECRC101 | 0.23 | OKFHMN_17880 | gltD | glutamate synthase subunit GltD | 0.21 | OKFHMN_27230 | ydiJ | Uncharacterized protein YdiJ | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.23 | OHPLBJKB_00487 | | Glutamate synthase [NADPH] small chain | 0.21 | OHPLBJKB_02037 | | hypothetical protein | low | > 73 |
| Escherichia coli BW25113 | 0.23 | b3213 | gltD | glutamate synthase, 4Fe-4S protein, small subunit (NCBI) | 0.21 | b1687 | ydiJ | predicted FAD-linked oxidoreductase (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 0.23 | EFB2_00610 | | Glutamate synthase [NADPH] small chain | 0.21 | EFB2_02305 | | hypothetical protein | low | > 86 |
| Escherichia coli ECRC99 | 0.23 | KEDOAH_10270 | gltD | glutamate synthase subunit GltD | 0.21 | KEDOAH_00880 | ydiJ | Uncharacterized protein YdiJ | — | — |
| Escherichia coli BL21 | 0.23 | ECD_03078 | | glutamate synthase, 4Fe-4S protein, small subunit | 0.21 | ECD_01656 | | putative FAD-linked oxidoreductase | low | > 60 |
| Escherichia coli ECRC98 | 0.23 | JDDGAC_21505 | gltD | glutamate synthase subunit GltD | 0.21 | JDDGAC_01805 | ydiJ | Uncharacterized protein YdiJ | — | — |
| Escherichia coli ECRC101 | 0.23 | MCAODC_08400 | gltD | glutamate synthase subunit GltD | 0.21 | MCAODC_18180 | ydiJ | Uncharacterized protein YdiJ | — | — |
| Shewanella sp. ANA-3 | 0.23 | Shewana3_3051 | gltD | glutamate synthase subunit beta (RefSeq) | 0.20 | Shewana3_1737 | | FAD linked oxidase domain-containing protein (RefSeq) | low | > 73 |
| Escherichia coli ECOR38 | 0.23 | HEPCGN_16755 | gltD | glutamate synthase subunit GltD | 0.21 | HEPCGN_05615 | ydiJ | Uncharacterized protein YdiJ | low | > 85 |
| Dickeya dadantii 3937 | 0.23 | DDA3937_RS01660 | | FAD-dependent oxidoreductase | 0.21 | DDA3937_RS12795 | | FAD-binding oxidoreductase | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.23 | GFF2957 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | 0.21 | GFF3554 | | Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD | low | > 78 |
| Pseudomonas sp. S08-1 | 0.23 | OH686_10000 | | Glutamate synthase [NADPH] small chain | 0.07 | OH686_17005 | | Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing | low | > 80 |
| Shewanella oneidensis MR-1 | 0.23 | SO1324 | gltD | glutamate synthase, small subunit (NCBI ptt file) | 0.20 | SO2643 | | oxidoreductase, FAD-binding, putative (NCBI ptt file) | low | > 76 |
| Dickeya dianthicola ME23 | 0.23 | DZA65_RS01630 | | FAD-dependent oxidoreductase | 0.21 | DZA65_RS13325 | | FAD-binding oxidoreductase | 0.68 | 60 |
| Rahnella sp. WP5 | 0.23 | EX31_RS12510 | | FAD-dependent oxidoreductase | 0.20 | EX31_RS13925 | | FAD-binding oxidoreductase | low | > 89 |
| Shewanella amazonensis SB2B | 0.23 | Sama_0856 | gltD | glutamate synthase subunit beta (RefSeq) | 0.19 | Sama_2071 | | oxidoreductase, FAD-binding, putative (RefSeq) | low | > 62 |
| Dickeya dianthicola 67-19 | 0.23 | HGI48_RS01555 | | glutamate synthase small subunit | 0.21 | HGI48_RS12860 | | FAD-binding oxidoreductase | low | > 71 |
| Erwinia tracheiphila SCR3 | 0.22 | LU632_RS21320 | | glutamate synthase small subunit | 0.20 | LU632_RS11040 | | FAD-binding oxidoreductase | 0.89 | 17 |
| Pectobacterium carotovorum WPP14 | 0.22 | HER17_RS19915 | | glutamate synthase small subunit | 0.21 | HER17_RS08905 | | FAD-binding oxidoreductase | low | > 75 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.18 | DVU2476 | gltA | glutamate synthase, small subunit (TIGR) | 0.09 | DVU0253 | | oxidoreductase, FAD/iron-sulfur cluster-binding domain protein (TIGR) | low | > 55 |
Not shown: 40 genomes with orthologs for Echvi_1243 only; 5 genomes with orthologs for Echvi_3865 only