Conservation of cofitness between EX31_RS03160 and EX31_RS12320 in Rahnella sp. WP5

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS03160 MFS transporter 1.0 EX31_RS12320 metalloprotease PmbA 0.34 19
Pectobacterium carotovorum WPP14 0.86 HER17_RS04075 MFS transporter 0.85 HER17_RS20090 metalloprotease PmbA low > 75
Escherichia coli ECOR27 0.85 NOLOHH_12100 gudP galactarate/glucarate/glycerate transporter GudP 0.86 NOLOHH_04185 pmbA metalloprotease PmbA low > 75
Escherichia coli BL21 0.85 ECD_02634 putative D-glucarate transporter 0.86 ECD_04103 putative antibiotic peptide MccB17 maturation peptidase low > 61
Escherichia coli ECOR38 0.85 HEPCGN_19475 gudP galactarate/glucarate/glycerate transporter GudP 0.86 HEPCGN_10125 pmbA metalloprotease PmbA low > 87
Escherichia coli ECRC62 0.85 BNILDI_10605 gudP galactarate/glucarate/glycerate transporter GudP 0.86 BNILDI_07325 pmbA metalloprotease PmbA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_00942 putative glucarate transporter 0.86 OHPLBJKB_03800 Metalloprotease PmbA low > 73
Escherichia fergusonii Becca 0.85 EFB2_01128 putative glucarate transporter 0.86 EFB2_04298 Metalloprotease PmbA low > 86
Escherichia coli BW25113 0.85 b2789 gudP predicted D-glucarate transporter (NCBI) 0.86 b4235 pmbA predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 (NCBI) low > 76
Escherichia coli Nissle 1917 0.85 ECOLIN_RS15540 galactarate/glucarate/glycerate transporter GudP 0.86 ECOLIN_RS24570 metalloprotease PmbA low > 55
Escherichia coli ECRC102 0.85 NIAGMN_17990 gudP galactarate/glucarate/glycerate transporter GudP 0.86 NIAGMN_09775 pmbA metalloprotease PmbA
Escherichia coli ECRC98 0.85 JDDGAC_23885 gudP galactarate/glucarate/glycerate transporter GudP 0.86 JDDGAC_15565 pmbA metalloprotease PmbA low > 86
Escherichia coli ECRC101 0.85 MCAODC_10745 gudP galactarate/glucarate/glycerate transporter GudP 0.86 MCAODC_02430 pmbA metalloprotease PmbA low > 87
Escherichia coli ECRC99 0.85 KEDOAH_07910 gudP galactarate/glucarate/glycerate transporter GudP 0.86 KEDOAH_16230 pmbA metalloprotease PmbA
Escherichia coli ECRC100 0.85 OKFHMN_20220 gudP galactarate/glucarate/glycerate transporter GudP 0.86 OKFHMN_11925 pmbA metalloprotease PmbA low > 80
Klebsiella michiganensis M5al 0.84 BWI76_RS22835 MFS transporter 0.85 BWI76_RS02850 metalloprotease PmbA low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF4843 D-glucarate permease 0.86 GFF904 TldE protein, part of TldE/TldD proteolytic complex low > 78
Enterobacter asburiae PDN3 0.82 EX28DRAFT_2870 D-galactonate transporter 0.85 EX28DRAFT_3422 Predicted Zn-dependent proteases and their inactivated homologs low > 76
Enterobacter sp. TBS_079 0.82 MPMX20_03659 putative glucarate transporter 0.86 MPMX20_00517 Metalloprotease PmbA low > 85
Dickeya dadantii 3937 0.81 DDA3937_RS17055 MFS transporter 0.82 DDA3937_RS01500 metalloprotease PmbA 0.45 37
Dickeya dianthicola ME23 0.81 DZA65_RS18185 MFS transporter 0.81 DZA65_RS01480 metalloprotease PmbA low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS17110 MFS transporter 0.81 HGI48_RS01415 metalloprotease PmbA low > 71
Erwinia tracheiphila SCR3 0.81 LU632_RS06310 MFS transporter 0.79 LU632_RS02145 pmbA metalloprotease PmbA low > 74
Pantoea sp. MT58 0.79 IAI47_04080 MFS transporter 0.84 IAI47_02765 metalloprotease PmbA low > 76
Pseudomonas putida KT2440 0.67 PP_3600 glucarate transporter 0.49 PP_0942 regulatory protease low > 96
Pseudomonas fluorescens SBW25 0.66 PFLU_RS04245 MFS transporter 0.49 PFLU_RS04350 metalloprotease PmbA low > 109
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS04245 MFS transporter 0.49 PFLU_RS04350 metalloprotease PmbA low > 109
Ralstonia sp. UNC404CL21Col 0.66 ABZR87_RS20330 MFS transporter 0.44 ABZR87_RS09660 metalloprotease PmbA low > 80
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_4226 D-galactonate transporter 0.48 Psyr_4154 microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_4226 D-galactonate transporter 0.48 Psyr_4154 microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 low > 86
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_07175 glucarate transporter 0.49 AO356_07085 peptidase PmbA low > 104
Pseudomonas simiae WCS417 0.66 PS417_04205 D-galacturonate transporter (MFS superfamily) (from data) 0.49 PS417_04295 peptidase PmbA low > 88
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_5043 D-galactarate permease 0.48 PfGW456L13_5024 TldE protein, part of TldE/TldD proteolytic complex low > 87
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_3297 D-galactarate permease 0.49 Pf6N2E2_3278 TldE protein, part of TldE/TldD proteolytic complex low > 103
Pseudomonas sp. RS175 0.65 PFR28_00144 putative glucarate transporter 0.50 PFR28_00163 Metalloprotease PmbA low > 88
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_05295 glucarate transporter 0.48 AO353_05205 peptidase PmbA low > 101
Ralstonia solanacearum PSI07 0.65 RPSI07_RS03475 MFS transporter 0.44 RPSI07_RS19505 metalloprotease PmbA low > 81
Ralstonia solanacearum GMI1000 0.65 RS_RS21080 MFS transporter 0.42 RS_RS04700 metalloprotease PmbA low > 80
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS19740 MFS transporter 0.44 RALBFv3_RS13965 metalloprotease PmbA low > 76
Ralstonia solanacearum UW163 0.65 UW163_RS19435 MFS transporter 0.44 UW163_RS15845 metalloprotease PmbA
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS15805 glucarate transporter 0.45 HSERO_RS09265 peptidase C69 low > 78
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS29085 glucarate transporter 0.41 RR42_RS14750 peptidase PMbA low > 128
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_1108 D-galactarate permease 0.48 Pf1N1B4_1090 TldE protein, part of TldE/TldD proteolytic complex low > 87
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS31870 MFS transporter 0.43 QEN71_RS04270 metalloprotease PmbA low > 153
Azospirillum sp. SherDot2 0.64 MPMX19_02893 putative glucarate transporter 0.35 MPMX19_01886 Metalloprotease PmbA low > 112
Xanthomonas campestris pv. campestris strain 8004 0.64 Xcc-8004.1209.1 D-galactarate permease 0.48 Xcc-8004.1885.1 TldE protein, part of TldE/TldD proteolytic complex low > 74
Paraburkholderia graminis OAS925 0.63 ABIE53_006507 ACS family glucarate transporter-like MFS transporter 0.43 ABIE53_003116 PmbA protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_05318 MFS transporter, ACS family, glucarate transporter 0.43 H281DRAFT_04304 microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62 low > 103
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS24150 glucarate transporter 0.43 BPHYT_RS14705 peptidase C69 low > 109
Variovorax sp. SCN45 0.53 GFF7272 D-glucarate permease 0.45 GFF4697 TldE protein, part of TldE/TldD proteolytic complex low > 127
Serratia liquefaciens MT49 0.35 IAI46_16925 MFS transporter 0.87 IAI46_22575 metalloprotease PmbA low > 86
Alteromonas macleodii MIT1002 0.09 MIT1002_01659 L-galactonate transporter 0.55 MIT1002_00230 peptidase PmbA low > 70

Not shown: 0 genomes with orthologs for EX31_RS03160 only; 37 genomes with orthologs for EX31_RS12320 only