| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Enterobacter asburiae PDN3 | 1.0 | EX28DRAFT_3857 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 1.0 | EX28DRAFT_4027 | | ABC-type sugar transport system, periplasmic component | 0.52 | 7 |
| Enterobacter sp. TBS_079 | 0.98 | MPMX20_00127 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.99 | MPMX20_04616 | | Ribose import binding protein RbsB | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.95 | GFF408 | | 'tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)' transl_table=11 | 0.98 | GFF1706 | | Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) | low | > 78 |
| Escherichia coli BW25113 | 0.95 | b3606 | yibK | predicted rRNA methylase (NCBI) | 0.98 | b3751 | rbsB | D-ribose transporter subunit (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.95 | HEPCGN_14605 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.98 | HEPCGN_13445 | rbsB | ribose ABC transporter substrate-binding protein RbsB | low | > 87 |
| Escherichia coli Nissle 1917 | 0.95 | ECOLIN_RS20585 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.98 | ECOLIN_RS21565 | | ribose ABC transporter substrate-binding protein RbsB | low | > 55 |
| Escherichia fergusonii Becca | 0.94 | EFB2_00204 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.99 | EFB2_04882 | | Ribose import binding protein RbsB | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.94 | OHPLBJKB_00093 | | 'tRNA (cytidine(34)-2'-O)-methyltransferase' transl_table=11 | 0.99 | OHPLBJKB_04302 | | Ribose import binding protein RbsB | low | > 73 |
| Escherichia coli BL21 | 0.94 | ECD_03464 | | tRNA Leu mC34,mU34 2'-O-methyltransferase, SAM-dependent | 0.99 | ECD_03637 | | D-ribose ABC transporter periplasmic binding protein; ribose chemotaxis receptor | 0.47 | 21 |
| Escherichia coli ECRC101 | 0.93 | MCAODC_06275 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.99 | MCAODC_05240 | rbsB | ribose ABC transporter substrate-binding protein RbsB | low | > 87 |
| Escherichia coli ECOR27 | 0.93 | NOLOHH_07645 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.99 | NOLOHH_06870 | rbsB | ribose ABC transporter substrate-binding protein RbsB | low | > 75 |
| Escherichia coli ECRC100 | 0.93 | OKFHMN_15765 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.99 | OKFHMN_14735 | rbsB | ribose ABC transporter substrate-binding protein RbsB | low | > 80 |
| Escherichia coli ECRC102 | 0.93 | NIAGMN_13525 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.99 | NIAGMN_12490 | rbsB | ribose ABC transporter substrate-binding protein RbsB | — | — |
| Escherichia coli ECRC98 | 0.93 | JDDGAC_19390 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.99 | JDDGAC_18355 | rbsB | ribose ABC transporter substrate-binding protein RbsB | low | > 86 |
| Escherichia coli ECRC62 | 0.93 | BNILDI_03870 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.99 | BNILDI_04655 | rbsB | ribose ABC transporter substrate-binding protein RbsB | low | > 75 |
| Escherichia coli ECRC99 | 0.93 | KEDOAH_12385 | trmL | tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL | 0.99 | KEDOAH_13415 | rbsB | ribose ABC transporter substrate-binding protein RbsB | — | — |
| Klebsiella michiganensis M5al | 0.92 | BWI76_RS27200 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.96 | BWI76_RS00285 | | D-ribose ABC transporter substrate-binding protein | low | > 92 |
| Serratia liquefaciens MT49 | 0.87 | IAI46_24670 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.82 | IAI46_25060 | | ribose ABC transporter substrate-binding protein RbsB | low | > 86 |
| Pantoea sp. MT58 | 0.84 | IAI47_00750 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.83 | IAI47_00365 | | ribose ABC transporter substrate-binding protein RbsB | low | > 76 |
| Rahnella sp. WP5 | 0.84 | EX31_RS14330 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.84 | EX31_RS06185 | | ribose ABC transporter substrate-binding protein RbsB | low | > 89 |
| Pseudomonas sp. S08-1 | 0.65 | OH686_14675 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.14 | OH686_07785 | | hypothetical protein | low | > 80 |
| Vibrio cholerae E7946 ATCC 55056 | 0.64 | CSW01_13605 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.72 | CSW01_14660 | | ribose ABC transporter substrate-binding protein RbsB | low | > 62 |
| Pseudomonas fluorescens FW300-N2C3 | 0.63 | AO356_09750 | | rRNA methylase | 0.23 | AO356_00970 | | LacI family transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.62 | Pf1N1B4_1613 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.23 | Pf1N1B4_6035 | | D-ribose ABC transporter, substrate-binding component RbsB (from data) | low | > 87 |
| Pseudomonas putida KT2440 | 0.62 | PP_5052 | | tRNA(Leu) mC34,mU34 2'-O-ribose methyltransferase, AdoMet-dependent | 0.23 | PP_2454 | | ribose ABC transporter, periplasmic ribose-binding subunit | low | > 96 |
| Pseudomonas fluorescens FW300-N2E3 | 0.62 | AO353_12135 | | rRNA methylase | 0.23 | AO353_20815 | | LacI family transcriptional regulator | low | > 101 |
| Paraburkholderia sabiae LMG 24235 | 0.62 | QEN71_RS01475 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.27 | QEN71_RS35805 | | substrate-binding domain-containing protein | low | > 153 |
| Pseudomonas simiae WCS417 | 0.61 | PS417_01625 | | rRNA methylase | 0.22 | PS417_17735 | | LacI family transcriptional regulator | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.61 | H281DRAFT_01998 | | tRNA (cytidine/uridine-2'-O-)-methyltransferase | 0.28 | H281DRAFT_02705 | | monosaccharide ABC transporter substrate-binding protein, CUT2 family | low | > 103 |
| Pseudomonas sp. RS175 | 0.61 | PFR28_04942 | | 'tRNA (cytidine(34)-2'-O)-methyltransferase' transl_table=11 | 0.24 | PFR28_02058 | | D-threitol-binding protein | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.61 | Pf6N2E2_3828 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.24 | Pf6N2E2_161 | | Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.61 | PfGW456L13_349 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.23 | PfGW456L13_3912 | | Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.60 | PFLU_RS01675 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.23 | PFLU_RS19520 | | substrate-binding domain-containing protein | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.60 | PFLU_RS01675 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.23 | PFLU_RS19520 | | substrate-binding domain-containing protein | low | > 109 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.59 | Psyr_4881 | | RNA methyltransferase TrmH, group 2 | 0.23 | Psyr_2151 | | monosaccharide ABC transporter substrate-binding protein, CUT2 family | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.59 | RR42_RS01855 | | rRNA methylase | 0.20 | RR42_RS32885 | | LacI family transcriptional regulator | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.59 | ABZR87_RS06775 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.20 | ABZR87_RS09970 | | sugar ABC transporter substrate-binding protein | low | > 80 |
| Pseudomonas syringae pv. syringae B728a | 0.59 | Psyr_4881 | | RNA methyltransferase TrmH, group 2 | 0.23 | Psyr_2151 | | monosaccharide ABC transporter substrate-binding protein, CUT2 family | low | > 86 |
| Ralstonia solanacearum IBSBF1503 | 0.59 | RALBFv3_RS10925 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.20 | RALBFv3_RS14255 | | sugar ABC transporter substrate-binding protein | — | — |
| Ralstonia solanacearum UW163 | 0.59 | UW163_RS02655 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.20 | UW163_RS11720 | | sugar ABC transporter substrate-binding protein | — | — |
| Ralstonia solanacearum GMI1000 | 0.58 | RS_RS01765 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.19 | RS_RS05035 | | sugar ABC transporter substrate-binding protein | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.58 | RPSI07_RS22385 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.20 | RPSI07_RS19210 | | sugar ABC transporter substrate-binding protein | low | > 81 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.57 | GFF684 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.16 | GFF5611 | | Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) | — | — |
| Variovorax sp. SCN45 | 0.57 | GFF2293 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.21 | GFF2140 | | Ribose ABC transporter, substrate-binding protein RbsB (TC 3.A.1.2.1) | low | > 127 |
| Dickeya dianthicola ME23 | 0.56 | DZA65_RS21630 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.81 | DZA65_RS22300 | | ribose ABC transporter substrate-binding protein RbsB | low | > 75 |
| Dickeya dianthicola 67-19 | 0.56 | HGI48_RS20615 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.81 | HGI48_RS21320 | | ribose ABC transporter substrate-binding protein RbsB | low | > 71 |
| Dickeya dadantii 3937 | 0.56 | DDA3937_RS00755 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.84 | DDA3937_RS00045 | | ribose ABC transporter substrate-binding protein RbsB | low | > 74 |
| Variovorax sp. OAS795 | 0.56 | ABID97_RS23985 | | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | 0.20 | ABID97_RS19775 | | sugar ABC transporter substrate-binding protein | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.55 | Ac3H11_3896 | | tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) | 0.19 | Ac3H11_3035 | | Fructose ABC transporter, substrate-binding component FrcB (from data) | low | > 79 |
| Herbaspirillum seropedicae SmR1 | 0.55 | HSERO_RS20815 | | tRNA methyltransferase | 0.24 | HSERO_RS11480 | | D-ribose ABC transporter, substrate-binding component RbsB (from data) | low | > 78 |
| Pectobacterium carotovorum WPP14 | 0.55 | HER17_RS00645 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.86 | HER17_RS21535 | | ribose ABC transporter substrate-binding protein RbsB | low | > 75 |
| Rhodospirillum rubrum S1H | 0.37 | Rru_A0365 | | tRNA/rRNA methyltransferase (SpoU) (NCBI) | 0.17 | Rru_A0247 | | Periplasmic binding protein/LacI transcriptional regulator (NCBI) | low | > 58 |
| Azospirillum sp. SherDot2 | 0.37 | MPMX19_05011 | | tRNA (cytidine(34)-2'-O)-methyltransferase | 0.57 | MPMX19_03760 | | Ribose import binding protein RbsB | low | > 112 |
Not shown: 35 genomes with orthologs for EX28DRAFT_3857 only; 6 genomes with orthologs for EX28DRAFT_4027 only