Conservation of cofitness between EX28DRAFT_3732 and EX28DRAFT_2495 in Enterobacter asburiae PDN3

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Enterobacter asburiae PDN3 1.0 EX28DRAFT_3732 poly(A) polymerase 1.0 EX28DRAFT_2495 RND family efflux transporter, MFP subunit 0.69 3
Enterobacter sp. TBS_079 0.89 MPMX20_00829 Poly(A) polymerase I 0.95 MPMX20_01065 Multidrug efflux pump subunit AcrA low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF89 Poly(A) polymerase (EC 2.7.7.19) 0.78 GFF4380 Membrane fusion protein of RND family multidrug efflux pump low > 78
Escherichia fergusonii Becca 0.85 EFB2_03901 Poly(A) polymerase I 0.83 EFB2_03595 Multidrug efflux pump subunit AcrA low > 86
Escherichia coli BL21 0.85 ECD_00142 poly(A) polymerase 0.83 ECD_00414 multidrug efflux system low > 61
Escherichia coli Nissle 1917 0.85 ECOLIN_RS00790 polynucleotide adenylyltransferase PcnB 0.83 ECOLIN_RS02755 multidrug efflux RND transporter periplasmic adaptor subunit AcrA — —
Escherichia coli BW25113 0.85 b0143 pcnB poly(A) polymerase I (VIMSS) 0.83 b0463 acrA multidrug efflux system (NCBI) low > 76
Escherichia coli ECRC98 0.85 JDDGAC_13950 pcnB polynucleotide adenylyltransferase PcnB 0.83 JDDGAC_11850 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA low > 86
Escherichia coli ECRC99 0.85 KEDOAH_17800 pcnB polynucleotide adenylyltransferase PcnB 0.83 KEDOAH_19765 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA — —
Escherichia coli ECRC100 0.85 OKFHMN_10355 pcnB polynucleotide adenylyltransferase PcnB 0.83 OKFHMN_08200 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_03519 Poly(A) polymerase I 0.83 OHPLBJKB_03211 Multidrug efflux pump subunit AcrA low > 73
Escherichia coli ECRC101 0.85 MCAODC_00870 pcnB polynucleotide adenylyltransferase PcnB 0.83 MCAODC_27425 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA low > 87
Escherichia coli ECOR38 0.85 HEPCGN_08305 pcnB polynucleotide adenylyltransferase PcnB 0.83 HEPCGN_06815 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA low > 87
Escherichia coli ECRC102 0.85 NIAGMN_08205 pcnB polynucleotide adenylyltransferase PcnB 0.83 NIAGMN_06255 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA — —
Escherichia coli ECRC62 0.85 BNILDI_08970 pcnB polynucleotide adenylyltransferase PcnB 0.83 BNILDI_22550 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA low > 75
Escherichia coli ECOR27 0.85 NOLOHH_02700 pcnB polynucleotide adenylyltransferase PcnB 0.83 NOLOHH_01135 acrA multidrug efflux RND transporter periplasmic adaptor subunit AcrA low > 75
Klebsiella michiganensis M5al 0.82 BWI76_RS05005 polynucleotide adenylyltransferase 0.88 BWI76_RS06780 MexE family multidrug efflux RND transporter periplasmic adaptor subunit low > 92
Erwinia tracheiphila SCR3 0.78 LU632_RS20090 pcnB polynucleotide adenylyltransferase PcnB 0.73 LU632_RS18180 efflux RND transporter periplasmic adaptor subunit — —
Dickeya dadantii 3937 0.77 DDA3937_RS15945 polynucleotide adenylyltransferase PcnB 0.70 DDA3937_RS05740 efflux RND transporter periplasmic adaptor subunit low > 74
Dickeya dianthicola 67-19 0.76 HGI48_RS16060 polynucleotide adenylyltransferase PcnB 0.68 HGI48_RS05795 efflux RND transporter periplasmic adaptor subunit low > 71
Dickeya dianthicola ME23 0.76 DZA65_RS17145 polynucleotide adenylyltransferase PcnB 0.68 DZA65_RS06120 efflux RND transporter periplasmic adaptor subunit low > 75
Pantoea sp. MT58 0.76 IAI47_15645 polynucleotide adenylyltransferase PcnB 0.74 IAI47_14510 efflux RND transporter periplasmic adaptor subunit low > 76
Serratia liquefaciens MT49 0.76 IAI46_21220 polynucleotide adenylyltransferase PcnB 0.75 IAI46_05190 multidrug efflux RND transporter periplasmic adaptor subunit SdeX low > 86
Pectobacterium carotovorum WPP14 0.75 HER17_RS05570 polynucleotide adenylyltransferase PcnB 0.68 HER17_RS15735 efflux RND transporter periplasmic adaptor subunit low > 75
Shewanella oneidensis MR-1 0.54 SO0872 pcnB polyA polymerase (NCBI ptt file) 0.46 SO4693 multidrug resistance protein, AcrA/AcrE family (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.52 Shew_3131 poly(A) polymerase (RefSeq) 0.44 Shew_0031 RND family efflux transporter MFP subunit (RefSeq) low > 60
Shewanella amazonensis SB2B 0.51 Sama_0778 tRNA nucleotidyltransferase (CCA-adding enzyme) (RefSeq) 0.44 Sama_3553 multidrug resistance protein AcrA/AcrE family (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_0058 poly(A) polymerase 0.33 B158DRAFT_0734 RND family efflux transporter, MFP subunit low > 40
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS15105 polynucleotide adenylyltransferase PcnB 0.31 LRK54_RS02095 efflux RND transporter periplasmic adaptor subunit low > 59
Rhodanobacter denitrificans MT42 0.45 LRK55_RS14820 polynucleotide adenylyltransferase PcnB 0.31 LRK55_RS01870 efflux RND transporter periplasmic adaptor subunit low > 63
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_03875 pcnB tRNA nucleotidyltransferase/poly(A) polymerase 0.33 OKGIIK_09165 acrA efflux transporter periplasmic adaptor subunit low > 52
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS00805 polynucleotide adenylyltransferase PcnB 0.48 ABZR86_RS18280 efflux RND transporter periplasmic adaptor subunit low > 74
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.3054.1 Poly(A) polymerase (EC 2.7.7.19) 0.49 Xcc-8004.1793.1 RND efflux system, membrane fusion protein CmeA low > 74
Lysobacter sp. OAE881 0.44 ABIE51_RS08015 polynucleotide adenylyltransferase PcnB 0.31 ABIE51_RS17985 efflux RND transporter periplasmic adaptor subunit low > 62
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_0830 Poly(A) polymerase 0.51 Psyr_4007 Secretion protein HlyD low > 86
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_0830 Poly(A) polymerase 0.51 Psyr_4007 Secretion protein HlyD low > 86
Pseudomonas putida KT2440 0.43 PP_4697 poly(A) polymerase 0.47 PP_1386 Probable efflux pump periplasmic linker TtgA low > 96
Pseudomonas sp. S08-1 0.43 OH686_17255 Poly(A) polymerase 0.50 OH686_16045 Multidrug efflux system, membrane fusion component low > 80
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_14395 poly(A) polymerase 0.47 AO353_17300 antibiotic transporter low > 101
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_2856 Poly(A) polymerase (EC 2.7.7.19) 0.47 Pf1N1B4_3247 Multidrug efflux RND membrane fusion protein MexC — —
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1523 Poly(A) polymerase (EC 2.7.7.19) 0.47 PfGW456L13_4580 Multidrug efflux RND membrane fusion protein MexC low > 87
Pseudomonas fluorescens SBW25 0.42 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.49 PFLU_RS06810 efflux RND transporter periplasmic adaptor subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.49 PFLU_RS06810 efflux RND transporter periplasmic adaptor subunit low > 109
Pseudomonas sp. RS175 0.42 PFR28_03719 Poly(A) polymerase I 0.50 PFR28_00632 putative efflux pump periplasmic linker TtgA low > 88
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_5155 Poly(A) polymerase (EC 2.7.7.19) 0.51 Pf6N2E2_2823 Multidrug efflux RND membrane fusion protein MexC low > 103
Pseudomonas simiae WCS417 0.42 PS417_23900 poly(A) polymerase 0.49 PS417_06775 antibiotic transporter low > 88
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_16070 poly(A) polymerase 0.50 AO356_04875 antibiotic transporter low > 104
Pseudomonas stutzeri RCH2 0.41 Psest_0998 poly(A) polymerase 0.49 Psest_0309 RND family efflux transporter, MFP subunit 0.32 3
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS00935 polynucleotide adenylyltransferase PcnB 0.43 ABZR87_RS05310 efflux RND transporter periplasmic adaptor subunit low > 80
Variovorax sp. OAS795 0.33 ABID97_RS08710 polynucleotide adenylyltransferase PcnB 0.38 ABID97_RS00320 efflux RND transporter periplasmic adaptor subunit low > 91
Acinetobacter radioresistens SK82 0.30 MPMX26_00543 Poly(A) polymerase I 0.39 MPMX26_00690 Multidrug efflux pump subunit AcrA low > 36

Not shown: 8 genomes with orthologs for EX28DRAFT_3732 only; 21 genomes with orthologs for EX28DRAFT_2495 only