Conservation of cofitness between EFB2_01128 and EFB2_04533 in Escherichia fergusonii Becca

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia fergusonii Becca 1.0 EFB2_01128 putative glucarate transporter 1.0 EFB2_04533 UvrABC system protein A 0.56 15
Escherichia coli BL21 1.00 ECD_02634 putative D-glucarate transporter 1.00 ECD_03930 ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00942 putative glucarate transporter 1.00 OHPLBJKB_03983 UvrABC system protein A low > 73
Escherichia coli ECOR27 1.00 NOLOHH_12100 gudP galactarate/glucarate/glycerate transporter GudP 1.00 NOLOHH_05145 uvrA excinuclease ABC subunit UvrA low > 75
Escherichia coli ECRC62 1.00 BNILDI_10605 gudP galactarate/glucarate/glycerate transporter GudP 1.00 BNILDI_06380 uvrA excinuclease ABC subunit UvrA low > 75
Escherichia coli ECOR38 1.00 HEPCGN_19475 gudP galactarate/glucarate/glycerate transporter GudP 1.00 HEPCGN_11510 uvrA excinuclease ABC subunit UvrA low > 87
Escherichia coli Nissle 1917 1.00 ECOLIN_RS15540 galactarate/glucarate/glycerate transporter GudP 1.00 ECOLIN_RS23485 excinuclease ABC subunit UvrA low > 55
Escherichia coli BW25113 1.00 b2789 gudP predicted D-glucarate transporter (NCBI) 1.00 b4058 uvrA excinuclease ABC subunit A (NCBI) low > 76
Escherichia coli ECRC98 1.00 JDDGAC_23885 gudP galactarate/glucarate/glycerate transporter GudP 1.00 JDDGAC_16530 uvrA excinuclease ABC subunit UvrA low > 86
Escherichia coli ECRC100 1.00 OKFHMN_20220 gudP galactarate/glucarate/glycerate transporter GudP 1.00 OKFHMN_12895 uvrA excinuclease ABC subunit UvrA 0.68 23
Escherichia coli ECRC102 1.00 NIAGMN_17990 gudP galactarate/glucarate/glycerate transporter GudP 1.00 NIAGMN_10740 uvrA excinuclease ABC subunit UvrA — —
Escherichia coli ECRC99 1.00 KEDOAH_07910 gudP galactarate/glucarate/glycerate transporter GudP 1.00 KEDOAH_15255 uvrA excinuclease ABC subunit UvrA — —
Escherichia coli ECRC101 1.00 MCAODC_10745 gudP galactarate/glucarate/glycerate transporter GudP 1.00 MCAODC_03405 uvrA excinuclease ABC subunit UvrA low > 87
Klebsiella michiganensis M5al 0.98 BWI76_RS22835 MFS transporter 0.96 BWI76_RS01950 excinuclease ABC subunit A low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF4843 D-glucarate permease 0.97 GFF1429 Excinuclease ABC subunit A low > 78
Enterobacter asburiae PDN3 0.94 EX28DRAFT_2870 D-galactonate transporter 0.96 EX28DRAFT_4246 excinuclease ABC, A subunit low > 76
Enterobacter sp. TBS_079 0.93 MPMX20_03659 putative glucarate transporter 0.96 MPMX20_00276 UvrABC system protein A low > 85
Rahnella sp. WP5 0.87 EX31_RS03160 MFS transporter 0.91 EX31_RS11990 excinuclease ABC subunit UvrA low > 89
Erwinia tracheiphila SCR3 0.85 LU632_RS06310 MFS transporter 0.91 LU632_RS23685 uvrA excinuclease ABC subunit UvrA low > 74
Pectobacterium carotovorum WPP14 0.84 HER17_RS04075 MFS transporter 0.91 HER17_RS03550 excinuclease ABC subunit UvrA low > 75
Pantoea sp. MT58 0.83 IAI47_04080 MFS transporter 0.92 IAI47_17815 excinuclease ABC subunit UvrA 0.35 35
Dickeya dadantii 3937 0.83 DDA3937_RS17055 MFS transporter 0.91 DDA3937_RS17605 excinuclease ABC subunit UvrA low > 74
Dickeya dianthicola 67-19 0.82 HGI48_RS17110 MFS transporter 0.91 HGI48_RS17610 excinuclease ABC subunit UvrA low > 71
Dickeya dianthicola ME23 0.82 DZA65_RS18185 MFS transporter 0.91 DZA65_RS18735 excinuclease ABC subunit UvrA low > 75
Pseudomonas putida KT2440 0.69 PP_3600 glucarate transporter 0.78 PP_0483 excinuclease (uvrABC system protein A) — —
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS04245 MFS transporter 0.78 PFLU_RS27025 excinuclease ABC subunit UvrA low > 109
Pseudomonas fluorescens SBW25 0.69 PFLU_RS04245 MFS transporter 0.78 PFLU_RS27025 excinuclease ABC subunit UvrA low > 109
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_3297 D-galactarate permease 0.78 Pf6N2E2_4888 Excinuclease ABC subunit A low > 103
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_05295 glucarate transporter 0.78 AO353_06855 ABC-ATPase UvrA low > 101
Pseudomonas sp. RS175 0.69 PFR28_00144 putative glucarate transporter 0.78 PFR28_03974 UvrABC system protein A low > 88
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_07175 glucarate transporter 0.78 AO356_14785 ABC-ATPase UvrA low > 104
Pseudomonas simiae WCS417 0.68 PS417_04205 D-galacturonate transporter (MFS superfamily) (from data) 0.78 PS417_25395 excinuclease ABC subunit A low > 88
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_5043 D-galactarate permease 0.78 PfGW456L13_1283 Excinuclease ABC subunit A low > 87
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS20330 MFS transporter 0.68 ABZR87_RS07120 excinuclease ABC subunit UvrA low > 80
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_1108 D-galactarate permease 0.78 Pf1N1B4_2611 Excinuclease ABC subunit A low > 87
Herbaspirillum seropedicae SmR1 0.67 HSERO_RS15805 glucarate transporter 0.68 HSERO_RS19810 excinuclease ABC subunit A low > 78
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_4226 D-galactonate transporter 0.78 Psyr_4520 Excinuclease ABC subunit A low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_4226 D-galactonate transporter 0.78 Psyr_4520 Excinuclease ABC subunit A low > 86
Ralstonia solanacearum GMI1000 0.67 RS_RS21080 MFS transporter 0.68 RS_RS02080 excinuclease ABC subunit UvrA low > 80
Ralstonia solanacearum PSI07 0.67 RPSI07_RS03475 MFS transporter 0.68 RPSI07_RS22065 excinuclease ABC subunit UvrA low > 81
Ralstonia solanacearum UW163 0.66 UW163_RS19435 MFS transporter 0.67 UW163_RS02345 excinuclease ABC subunit UvrA — —
Ralstonia solanacearum IBSBF1503 0.66 RALBFv3_RS19740 MFS transporter 0.67 RALBFv3_RS11235 excinuclease ABC subunit UvrA low > 76
Xanthomonas campestris pv. campestris strain 8004 0.66 Xcc-8004.1209.1 D-galactarate permease 0.73 Xcc-8004.3830.1 Excinuclease ABC subunit A low > 74
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS29085 glucarate transporter 0.67 RR42_RS02145 excinuclease ABC subunit A low > 128
Azospirillum sp. SherDot2 0.65 MPMX19_02893 putative glucarate transporter 0.60 MPMX19_01152 UvrABC system protein A low > 112
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS31870 MFS transporter 0.68 QEN71_RS01825 excinuclease ABC subunit UvrA low > 153
Paraburkholderia graminis OAS925 0.64 ABIE53_006507 ACS family glucarate transporter-like MFS transporter 0.68 ABIE53_000732 excinuclease ABC subunit A low > 113
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS24150 glucarate transporter 0.68 BPHYT_RS02970 excinuclease ABC subunit A low > 109
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_05318 MFS transporter, ACS family, glucarate transporter 0.68 H281DRAFT_01913 Excinuclease ABC subunit A low > 103
Variovorax sp. SCN45 0.53 GFF7272 D-glucarate permease 0.65 GFF4944 Excinuclease ABC subunit A low > 127

Not shown: 0 genomes with orthologs for EFB2_01128 only; 53 genomes with orthologs for EFB2_04533 only