Conservation of cofitness between Dsui_3144 and Dsui_2257 in Dechlorosoma suillum PS

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dechlorosoma suillum PS 1.0 Dsui_3144 type IV pilus biogenesis/stability protein PilW 1.0 Dsui_2257 transcriptional regulator 0.54 15
Ralstonia solanacearum GMI1000 0.30 RS_RS06075 type IV pilus biogenesis/stability protein PilW 0.36 RS_RS05515 LysR family transcriptional regulator — —
Ralstonia solanacearum PSI07 0.29 RPSI07_RS18110 type IV pilus biogenesis/stability protein PilW 0.36 RPSI07_RS18655 LysR family transcriptional regulator low > 81
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS15265 type IV pilus biogenesis/stability protein PilW 0.36 RALBFv3_RS14705 LysR family transcriptional regulator — —
Ralstonia solanacearum UW163 0.28 UW163_RS12730 type IV pilus biogenesis/stability protein PilW 0.36 UW163_RS12175 LysR family transcriptional regulator — —
Ralstonia sp. UNC404CL21Col 0.28 ABZR87_RS10905 type IV pilus biogenesis/stability protein PilW 0.34 ABZR87_RS10365 LysR family transcriptional regulator low > 80
Cupriavidus basilensis FW507-4G11 0.26 RR42_RS13150 pilus assembly protein PilW 0.31 RR42_RS13965 LysR family transcriptional regulator low > 128
Dyella japonica UNC79MFTsu3.2 0.26 ABZR86_RS05450 type IV pilus biogenesis/stability protein PilW 0.33 ABZR86_RS19780 LysR family transcriptional regulator low > 74
Rhodanobacter sp. FW510-T8 0.25 OKGIIK_07135 pilW type IV pilus biogenesis/stability protein PilW 0.34 OKGIIK_02230 lysR LysR family transcriptional regulator low > 52
Variovorax sp. SCN45 0.24 GFF993 Type IV pilus biogenesis protein PilF 0.32 GFF3160 Transcriptional regulator YeiE, LysR family low > 127
Rhodanobacter denitrificans FW104-10B01 0.24 LRK54_RS00075 type IV pilus biogenesis/stability protein PilW 0.33 LRK54_RS12835 LysR family transcriptional regulator low > 59
Rhodanobacter denitrificans MT42 0.24 LRK55_RS18070 type IV pilus biogenesis/stability protein PilW 0.33 LRK55_RS12535 LysR family transcriptional regulator 0.64 58
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF4865 Type IV pilus biogenesis protein PilF 0.30 GFF333 LysR family transcriptional regulator YeiE low > 90
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_1246 TPR repeat protein:TPR repeat protein 0.59 Psyr_1386 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_1246 TPR repeat protein:TPR repeat protein 0.59 Psyr_1386 transcriptional regulator, LysR family low > 86
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_856 Type IV pilus biogenesis protein PilF 0.59 Pf1N1B4_3152 LysR family transcriptional regulator PA3398 low > 87
Pseudomonas fluorescens FW300-N2C3 0.20 AO356_06600 pilus assembly protein PilW 0.58 AO356_05630 LysR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.20 Pf6N2E2_3180 Type IV pilus biogenesis protein PilF 0.59 Pf6N2E2_2984 LysR family transcriptional regulator PA3398 low > 103
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_15880 pilus assembly protein PilW 0.59 AO353_16845 LysR family transcriptional regulator low > 101
Pseudomonas sp. S08-1 0.19 OH686_17520 type IV pilus biogenesis/stability protein PilW 0.61 OH686_18820 Transcriptional regulator, LysR family low > 80
Pseudomonas sp. RS175 0.19 PFR28_00295 hypothetical protein 0.58 PFR28_00480 HTH-type transcriptional activator CmpR low > 88
Pseudomonas stutzeri RCH2 0.18 Psest_1260 type IV pilus biogenesis/stability protein PilW 0.60 Psest_2863 Transcriptional regulator low > 67
Pseudomonas simiae WCS417 0.18 PS417_23155 pilus assembly protein PilW 0.58 PS417_05850 LysR family transcriptional regulator low > 88
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_4864 Type IV pilus biogenesis protein PilF 0.54 PfGW456L13_4660 LysR family transcriptional regulator PA3398 low > 87
Pseudomonas putida KT2440 0.17 PP_0851 Type IV pili biogenesis protein PilF 0.57 PP_1637 Transcriptional regulator, LysR family low > 96
Acinetobacter radioresistens SK82 0.17 MPMX26_00427 Lipopolysaccharide assembly protein B 0.37 MPMX26_02541 HTH-type transcriptional regulator CysL low > 36
Shewanella amazonensis SB2B 0.17 Sama_2367 fimbrial biogenesis and twitching motility protein, putative (RefSeq) 0.32 Sama_1882 LysR family transcriptional regulator (RefSeq) low > 62
Shewanella loihica PV-4 0.16 Shew_1288 type IV pilus biogenesis/stability protein PilW (RefSeq) 0.32 Shew_2531 LysR family transcriptional regulator (RefSeq) low > 60
Pseudomonas fluorescens SBW25 0.15 PFLU_RS24810 type IV pilus biogenesis/stability protein PilW 0.58 PFLU_RS05920 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.15 PFLU_RS24810 type IV pilus biogenesis/stability protein PilW 0.58 PFLU_RS05920 LysR family transcriptional regulator low > 109
Serratia liquefaciens MT49 0.15 IAI46_19285 type IV pilus biogenesis/stability protein PilW 0.38 IAI46_17215 LysR family transcriptional regulator low > 86
Vibrio cholerae E7946 ATCC 55056 0.13 CSW01_08105 type IV pilus biogenesis/stability protein PilW 0.33 CSW01_11795 LysR family transcriptional regulator low > 62
Rahnella sp. WP5 0.12 EX31_RS20520 type IV pilus biogenesis/stability protein PilW 0.39 EX31_RS19050 LysR family transcriptional regulator low > 89
Dickeya dianthicola 67-19 0.12 HGI48_RS15585 type IV pilus biogenesis/stability protein PilW 0.38 HGI48_RS09285 LysR family transcriptional regulator low > 71
Dickeya dianthicola ME23 0.12 DZA65_RS16660 type IV pilus biogenesis/stability protein PilW 0.38 DZA65_RS09590 LysR family transcriptional regulator low > 75
Erwinia tracheiphila SCR3 0.10 LU632_RS17810 pilW type IV pilus biogenesis/stability protein PilW 0.38 LU632_RS17295 LysR family transcriptional regulator low > 74
Pantoea sp. MT58 0.09 IAI47_05045 type IV pilus biogenesis/stability protein PilW 0.37 IAI47_06680 LysR family transcriptional regulator low > 76

Not shown: 4 genomes with orthologs for Dsui_3144 only; 26 genomes with orthologs for Dsui_2257 only