Conservation of cofitness between CSW01_03335 and CSW01_19180 in Vibrio cholerae E7946 ATCC 55056

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03335 ribosome assembly RNA-binding protein YhbY 1.0 CSW01_19180 cysteine methyltransferase 0.48 16
Pantoea agglomerans CFBP13505 P0401 0.82 PagCFBP13505_RS09170 ribosome assembly RNA-binding protein YhbY 0.49 PagCFBP13505_RS03660 methylated-DNA--[protein]-cysteine S-methyltransferase low > 74
Pantoea sp. MT58 0.81 IAI47_17075 ribosome assembly RNA-binding protein YhbY 0.49 IAI47_13640 methylated-DNA--[protein]-cysteine S-methyltransferase low > 76
Dickeya dianthicola 67-19 0.80 HGI48_RS03190 ribosome assembly RNA-binding protein YhbY 0.34 HGI48_RS10895 methylated-DNA--[protein]-cysteine S-methyltransferase low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS03185 ribosome assembly RNA-binding protein YhbY 0.35 DZA65_RS11355 methylated-DNA--[protein]-cysteine S-methyltransferase low > 75
Shewanella amazonensis SB2B 0.78 Sama_0952 RNA-binding protein (RefSeq) 0.42 Sama_2204 methylated-DNA--(protein)-cysteine S-methyltransferase (RefSeq) low > 62
Erwinia amylovora T8 0.77 OLJFJH_07190 ribosome assembly RNA-binding protein YhbY 0.46 OLJFJH_16870 glycosyltransferase low > 58
Erwinia tracheiphila HP pepo 2.2 0.77 IJEDHG_13870 yhbY ribosome assembly RNA-binding protein YhbY 0.47 IJEDHG_02050 glycosyltransferase low > 61
Shewanella oneidensis MR-1 0.76 SO1195 conserved hypothetical protein TIGR00253 (NCBI ptt file) 0.41 SO3126 ogt methylated-DNA--protein-cysteine methyltransferase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.76 Shewana3_1021 hypothetical protein (RefSeq) 0.41 Shewana3_1421 methylated-DNA--protein-cysteine methyltransferase (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.76 LU632_RS21115 yhbY ribosome assembly RNA-binding protein YhbY 0.47 LU632_RS15965 methylated-DNA--[protein]-cysteine S-methyltransferase low > 73
Rahnella sp. WP5 0.73 EX31_RS08590 ribosome assembly RNA-binding protein YhbY 0.48 EX31_RS08260 methylated-DNA--[protein]-cysteine S-methyltransferase low > 89
Kangiella aquimarina DSM 16071 0.58 B158DRAFT_0633 putative RNA-binding protein, YhbY family 0.50 B158DRAFT_1110 O-6-methylguanine DNA methyltransferase low > 40
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS06570 ribosome assembly RNA-binding protein YhbY 0.47 ABZR86_RS07770 methylated-DNA--[protein]-cysteine S-methyltransferase low > 74
Lysobacter sp. OAE881 0.49 ABIE51_RS06515 ribosome assembly RNA-binding protein YhbY 0.45 ABIE51_RS06260 methylated-DNA--[protein]-cysteine S-methyltransferase low > 62
Rhodanobacter sp000427505 FW510-R12 0.47 LRK53_RS12245 ribosome assembly RNA-binding protein YhbY 0.45 LRK53_RS12525 methylated-DNA--[protein]-cysteine S-methyltransferase low > 59
Acinetobacter baumannii LAC-4 0.46 RR41_RS04175 ribosome assembly RNA-binding protein YhbY 0.48 RR41_RS15710 methylated-DNA--[protein]-cysteine S-methyltransferase low > 55
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.3126.1 FIG004454: RNA binding protein 0.45 Xcc-8004.1829.1 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) — —
Acinetobacter radioresistens SK82 0.45 MPMX26_00770 RNA-binding protein 0.47 MPMX26_02567 Methylated-DNA--protein-cysteine methyltransferase low > 36
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_08090 yhbY ribosome assembly RNA-binding protein YhbY 0.46 OKGIIK_08370 adaB cysteine methyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS16675 ribosome assembly RNA-binding protein YhbY 0.46 LRK54_RS16290 methylated-DNA--[protein]-cysteine S-methyltransferase low > 59
Rhodanobacter denitrificans MT42 0.45 LRK55_RS16400 ribosome assembly RNA-binding protein YhbY 0.46 LRK55_RS16040 methylated-DNA--[protein]-cysteine S-methyltransferase low > 63
Pseudomonas sp. SVBP6 0.45 COO64_RS15225 yhbY ribosome assembly RNA-binding protein YhbY 0.45 COO64_RS06200 methylated-DNA--[protein]-cysteine S-methyltransferase low > 93
Pseudomonas sp. S08-1 0.45 OH686_17095 RNA-binding protein YhbY 0.39 OH686_16840 Methylated-DNA--protein-cysteine methyltransferase low > 80
Pseudomonas sp. BP01 0.44 JOY50_RS26780 YhbY family RNA-binding protein 0.50 JOY50_RS19715 methylated-DNA--[protein]-cysteine S-methyltransferase — —
Pseudomonas putida KT2440 0.44 PP_4720 putative RNA binding protein 0.49 PP_3017 O6-methylguanine-DNA methyltransferase low > 96
Pseudomonas segetis P6 0.43 MPMX49_01190 RNA-binding protein 0.46 MPMX49_02786 Methylated-DNA--protein-cysteine methyltransferase low > 75
Pseudomonas aeruginosa PA14 0.42 IKLFDK_29830 ribosome assembly RNA-binding protein YhbY 0.45 IKLFDK_04510 methylated-DNA--[protein]-cysteine S-methyltransferase low > 98
Pseudomonas aeruginosa PUPa3 0.42 DQ20_RS52515 yhbY;go_component=cytoplasm|0005737||IEA;go_function=RNA ribosome assembly RNA-binding protein YhbY 0.45 DQ20_RS45285 methylated-DNA--[protein]-cysteine S-methyltransferase low > 101
Pseudomonas aeruginosa MRSN321 0.42 DY961_RS09520 yhbY;go_component=cytoplasm|0005737||IEA;go_function=RNA ribosome assembly RNA-binding protein YhbY 0.45 DY961_RS07505 methylated-DNA--[protein]-cysteine S-methyltransferase low > 100
Pseudomonas lactucae CFBP13502 0.42 GEMAOFIL_04955 RNA-binding protein 0.48 GEMAOFIL_01545 Methylated-DNA--protein-cysteine methyltransferase — —
Pseudomonas simiae WCS417 0.42 PS417_24025 RNA-binding protein 0.50 PS417_06965 cysteine methyltransferase — —
Pseudomonas fluorescens SBW25 0.42 PFLU_RS25865 YhbY family RNA-binding protein 0.47 PFLU_RS07030 methylated-DNA--[protein]-cysteine S-methyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS25865 YhbY family RNA-binding protein 0.47 PFLU_RS07030 methylated-DNA--[protein]-cysteine S-methyltransferase low > 109
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_1169 FIG004454: RNA binding protein 0.48 Pf1N1B4_4080 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) — —
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_05615 RNA-binding protein 0.45 AO353_15075 cysteine methyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_3361 FIG004454: RNA binding protein 0.45 Pf6N2E2_3240 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) — —
Pseudomonas orientalis W4I3 0.41 QF045_RS26280 YhbY family RNA-binding protein 0.48 QF045_RS09715 methylated-DNA--[protein]-cysteine S-methyltransferase low > 93
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_07465 RNA-binding protein 0.45 AO356_06890 cysteine methyltransferase — —
Pseudomonas sp. RS175 0.40 PFR28_00080 RNA-binding protein YhbY 0.45 PFR28_03616 Methylated-DNA--protein-cysteine methyltransferase — —
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_5096 FIG004454: RNA binding protein 0.48 PfGW456L13_2670 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) low > 87
Bifidobacterium breve UCC2003 0.31 BBR_RS17295 RNA-binding protein 0.26 BBR_RS12185 methylated-DNA--[protein]-cysteine S-methyltransferase low > 34
Fusobacterium nucleatum SB010 0.29 HUW76_04210 ribosome assembly RNA-binding protein YhbY 0.38 HUW76_00595 methylated-DNA--[protein]-cysteine S-methyltransferase low > 35

Not shown: 29 genomes with orthologs for CSW01_03335 only; 20 genomes with orthologs for CSW01_19180 only