Conservation of cofitness between CSW01_09980 and CSW01_19025 in Vibrio cholerae E7946 ATCC 55056

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09980 D-hexose-6-phosphate mutarotase 1.0 CSW01_19025 LysR family transcriptional regulator 0.47 6
Rahnella sp. WP5 0.37 EX31_RS06275 D-hexose-6-phosphate mutarotase 0.30 EX31_RS16730 LysR family transcriptional regulator low > 89
Serratia liquefaciens MT49 0.35 IAI46_14360 D-hexose-6-phosphate mutarotase 0.55 IAI46_20610 LysR family transcriptional regulator low > 86
Pantoea agglomerans CFBP13505 P0401 0.33 PagCFBP13505_RS02775 D-hexose-6-phosphate mutarotase 0.27 PagCFBP13505_RS08890 LysR family transcriptional regulator low > 74
Dickeya dianthicola 67-19 0.33 HGI48_RS10270 D-hexose-6-phosphate mutarotase 0.26 HGI48_RS19010 LysR family transcriptional regulator low > 71
Escherichia coli Nissle 1917 0.32 ECOLIN_RS09925 D-hexose-6-phosphate mutarotase 0.25 ECOLIN_RS20140 LysR family transcriptional regulator
Escherichia fergusonii Becca 0.32 EFB2_02214 Putative glucose-6-phosphate 1-epimerase 0.25 EFB2_00287 HTH-type transcriptional regulator DmlR low > 86
Pantoea sp. MT58 0.32 IAI47_08940 D-hexose-6-phosphate mutarotase 0.28 IAI47_20580 LysR family transcriptional regulator low > 76
Escherichia coli ECOR27 0.32 NOLOHH_17255 yeaD Putative glucose-6-phosphate 1-epimerase 0.25 NOLOHH_08195 yhjC Uncharacterized HTH-type transcriptional regulator YhjC low > 76
Escherichia coli BW25113 0.32 b1780 yeaD orf, hypothetical protein (VIMSS) 0.25 b3521 yhjC predicted DNA-binding transcriptional regulator (RefSeq) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_01952 Putative glucose-6-phosphate 1-epimerase 0.25 OHPLBJKB_00181 HTH-type transcriptional regulator DmlR low > 74
Escherichia coli BL21 0.32 ECD_01749 D-hexose-6-phosphate epimerase-like protein 0.25 ECD_03369 LysR family putative transcriptional regulator low > 61
Escherichia coli ECRC62 0.32 BNILDI_16040 yeaD Putative glucose-6-phosphate 1-epimerase 0.25 BNILDI_03360 yhjC Uncharacterized HTH-type transcriptional regulator YhjC low > 75
Escherichia coli ECRC100 0.32 OKFHMN_26725 yeaD Putative glucose-6-phosphate 1-epimerase 0.25 OKFHMN_17760 aaeR HTH-type transcriptional activator AaeR low > 79
Escherichia coli ECRC102 0.32 NIAGMN_01340 yeaD Putative glucose-6-phosphate 1-epimerase 0.25 NIAGMN_15520 aaeR HTH-type transcriptional activator AaeR
Escherichia coli ECRC99 0.32 KEDOAH_01385 yeaD Putative glucose-6-phosphate 1-epimerase 0.25 KEDOAH_10390 aaeR HTH-type transcriptional activator AaeR
Escherichia coli ECRC101 0.32 MCAODC_18685 yeaD Putative glucose-6-phosphate 1-epimerase 0.25 MCAODC_08280 aaeR HTH-type transcriptional activator AaeR
Escherichia coli ECRC98 0.32 JDDGAC_01300 yeaD Putative glucose-6-phosphate 1-epimerase 0.25 JDDGAC_21385 aaeR HTH-type transcriptional activator AaeR low > 87
Escherichia coli ECOR38 0.31 HEPCGN_05115 yeaD Putative glucose-6-phosphate 1-epimerase 0.25 HEPCGN_15135 yhjC Uncharacterized HTH-type transcriptional regulator YhjC low > 88
Klebsiella pneumoniae MKP103 0.31 KDGMDA_19175 D-hexose-6-phosphate mutarotase 0.28 KDGMDA_05040 LysR family transcriptional regulator low > 95
Klebsiella michiganensis M5al 0.31 BWI76_RS11500 D-hexose-6-phosphate mutarotase 0.27 BWI76_RS27965 LysR family transcriptional regulator low > 92
Pseudomonas sp. BP01 0.31 JOY50_RS08840 D-hexose-6-phosphate mutarotase 0.32 JOY50_RS04745 LysR family transcriptional regulator low > 84
Erwinia amylovora T8 0.31 OLJFJH_13215 D-hexose-6-phosphate mutarotase 0.25 OLJFJH_06945 HTH-type transcriptional activator AaeR low > 58
Alteromonas macleodii MIT1002 0.30 MIT1002_02402 Putative glucose-6-phosphate 1-epimerase 0.76 MIT1002_03329 D-malate degradation protein R low > 70
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_750 Aldose 1-epimerase 0.32 PfGW456L13_3857 Transcriptional regulator, LysR family low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF3477 Aldose 1-epimerase family protein YeaD 0.25 GFF2141 LysR family transcriptional regulator QseA low > 78
Pseudomonas putida KT2440 0.30 PP_5332 conserved protein of unknown function 0.32 PP_3811 Transcriptional regulator, LysR family low > 96
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_4078 Aldose 1-epimerase 0.32 Pf6N2E2_259 Transcriptional regulator, LysR family low > 103
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_11060 aldose epimerase 0.31 AO356_21990 LysR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_2031 Aldose 1-epimerase 0.32 Pf1N1B4_5905 Transcriptional regulator, LysR family low > 87
Pseudomonas sp. DMC3 0.29 GFF482 Putative glucose-6-phosphate 1-epimerase 0.32 GFF943 HTH-type transcriptional regulator DmlR low > 89
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_09920 aldose epimerase 0.31 AO353_22295 LysR family transcriptional regulator low > 101
Pseudomonas segetis P6 0.28 MPMX49_00129 Putative glucose-6-phosphate 1-epimerase 0.29 MPMX49_03437 HTH-type transcriptional regulator DmlR low > 75
Pseudomonas sp. RS175 0.28 PFR28_04492 Putative glucose-6-phosphate 1-epimerase 0.30 PFR28_00531 HTH-type transcriptional regulator DmlR low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_5044 Aldose 1-epimerase 0.32 Psyr_2951 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_5044 Aldose 1-epimerase 0.32 Psyr_2951 transcriptional regulator, LysR family low > 86
Pseudomonas simiae WCS417 0.27 PS417_28100 glucose-6-phosphate 1-epimerase [EC: 5.1.3.15] (from data) 0.32 PS417_16085 LysR family transcriptional regulator low > 88
Pseudomonas aeruginosa PA14 0.27 IKLFDK_26315 D-hexose-6-phosphate mutarotase 0.31 IKLFDK_11955 LysR family transcriptional regulator low > 100
Pseudomonas sp. S08-1 0.26 OH686_13395 Aldose 1-epimerase family protein YeaD 0.31 OH686_18145 Transcriptional regulator, LysR family, in formaldehyde detoxification operon low > 80
Shewanella sp. ANA-3 0.26 Shewana3_2553 aldose 1-epimerase (RefSeq) 0.37 Shewana3_3800 LysR family transcriptional regulator (RefSeq) low > 73
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS29785 D-hexose-6-phosphate mutarotase 0.33 PFLU_RS18050 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.25 PFLU_RS29785 D-hexose-6-phosphate mutarotase 0.33 PFLU_RS18050 LysR family transcriptional regulator low > 109
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS07395 aldose 1-epimerase 0.32 HSERO_RS02935 LysR family transcriptional regulator low > 78
Shewanella oneidensis MR-1 0.25 SO2769 conserved hypothetical protein (NCBI ptt file) 0.38 SO0369 transcriptional regulator, LysR family (NCBI ptt file) low > 76
Pseudomonas lactucae CFBP13502 0.25 GEMAOFIL_00086 Putative glucose-6-phosphate 1-epimerase 0.32 GEMAOFIL_02593 HTH-type transcriptional regulator DmlR low > 93
Pseudomonas stutzeri RCH2 0.25 Psest_0135 Uncharacterized enzymes related to aldose 1-epimerase 0.31 Psest_2163 Transcriptional regulator low > 67
Marinobacter adhaerens HP15 0.25 HP15_1887 aldose 1-epimerase family protein 0.31 HP15_936 transcriptional regulator, LysR family protein low > 73
Variovorax sp. SCN45 0.24 GFF5356 Aldose 1-epimerase 0.29 GFF6589 Transcriptional regulator, LysR family low > 127
Lysobacter sp. OAE881 0.23 ABIE51_RS13360 D-hexose-6-phosphate mutarotase 0.30 ABIE51_RS12770 LysR family transcriptional regulator low > 62
Methylophilus sp. DMC18 0.22 GFF1638 Putative glucose-6-phosphate 1-epimerase 0.31 GFF2818 HTH-type transcriptional regulator DmlR low > 43
Dechlorosoma suillum PS 0.22 Dsui_2183 aldose 1-epimerase-like enzyme 0.32 Dsui_2353 transcriptional regulator low > 51

Not shown: 13 genomes with orthologs for CSW01_09980 only; 21 genomes with orthologs for CSW01_19025 only