| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_14650 | | ribose import ATP-binding protein RbsA | 1.0 | CSW01_15165 | | DNA-binding response regulator | 0.47 | 9 |
| Dickeya dadantii 3937 | 0.71 | DDA3937_RS00035 | | ribose ABC transporter ATP-binding protein RbsA | 0.34 | DDA3937_RS03385 | | heavy metal response regulator transcription factor | low | > 74 |
| Escherichia coli BL21 | 0.71 | ECD_03635 | | D-ribose ABC transporter ATPase | 0.39 | ECD_00532 | | response regulator in two-component regulatory system with CusS | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.71 | OHPLBJKB_04304 | | Ribose import ATP-binding protein RbsA | 0.39 | OHPLBJKB_03138 | | Transcriptional regulatory protein CusR | low | > 73 |
| Escherichia coli ECOR38 | 0.71 | HEPCGN_13455 | rbsA | ribose ABC transporter ATP-binding protein RbsA | 0.39 | HEPCGN_00585 | cusR | copper response regulator transcription factor CusR | low | > 87 |
| Escherichia coli BW25113 | 0.71 | b3749 | rbsA | fused D-ribose transporter subunits of ABC superfamily: ATP-binding components (NCBI) | 0.39 | b0571 | cusR | DNA-binding response regulator in two-component regulatory system with CusS (NCBI) | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.71 | HER17_RS21545 | | ribose ABC transporter ATP-binding protein RbsA | 0.38 | HER17_RS13650 | | heavy metal response regulator transcription factor | low | > 75 |
| Escherichia coli Nissle 1917 | 0.71 | ECOLIN_RS21555 | | ribose ABC transporter ATP-binding protein RbsA | 0.39 | ECOLIN_RS03125 | | copper response regulator transcription factor CusR | — | — |
| Escherichia coli ECRC99 | 0.71 | KEDOAH_13405 | rbsA | ribose ABC transporter ATP-binding protein RbsA | 0.39 | KEDOAH_20265 | cusR | copper response regulator transcription factor CusR | — | — |
| Escherichia coli ECRC100 | 0.71 | OKFHMN_14745 | rbsA | ribose ABC transporter ATP-binding protein RbsA | 0.39 | OKFHMN_07705 | cusR | copper response regulator transcription factor CusR | low | > 80 |
| Escherichia coli ECOR27 | 0.71 | NOLOHH_06880 | rbsA | ribose ABC transporter ATP-binding protein RbsA | 0.39 | NOLOHH_24085 | cusR | copper response regulator transcription factor CusR | low | > 75 |
| Escherichia fergusonii Becca | 0.71 | EFB2_04884 | | Ribose import ATP-binding protein RbsA | 0.39 | EFB2_03523 | | Transcriptional regulatory protein CusR | low | > 86 |
| Escherichia coli ECRC98 | 0.71 | JDDGAC_18365 | rbsA | ribose ABC transporter ATP-binding protein RbsA | 0.39 | JDDGAC_11350 | cusR | copper response regulator transcription factor CusR | low | > 86 |
| Escherichia coli ECRC101 | 0.71 | MCAODC_05250 | rbsA | ribose ABC transporter ATP-binding protein RbsA | 0.39 | MCAODC_26920 | cusR | copper response regulator transcription factor CusR | low | > 87 |
| Escherichia coli ECRC102 | 0.71 | NIAGMN_12500 | rbsA | ribose ABC transporter ATP-binding protein RbsA | 0.39 | NIAGMN_05760 | cusR | copper response regulator transcription factor CusR | — | — |
| Escherichia coli ECRC62 | 0.71 | BNILDI_04645 | rbsA | ribose ABC transporter ATP-binding protein RbsA | 0.39 | BNILDI_22095 | cusR | copper response regulator transcription factor CusR | low | > 75 |
| Serratia liquefaciens MT49 | 0.71 | IAI46_25070 | | ribose ABC transporter ATP-binding protein RbsA | 0.39 | IAI46_16745 | | heavy metal response regulator transcription factor | low | > 86 |
| Dickeya dianthicola 67-19 | 0.71 | HGI48_RS21330 | | ribose ABC transporter ATP-binding protein RbsA | 0.40 | HGI48_RS03485 | | heavy metal response regulator transcription factor | low | > 71 |
| Klebsiella michiganensis M5al | 0.71 | BWI76_RS00275 | | ribose ABC transporter ATP-binding protein RbsA | 0.32 | BWI76_RS18590 | | DNA-binding response regulator | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.71 | GFF1708 | | Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) | 0.36 | GFF3273 | | Putative two-component system response regulator YedW | low | > 78 |
| Dickeya dianthicola ME23 | 0.71 | DZA65_RS22310 | | ribose ABC transporter ATP-binding protein RbsA | 0.41 | DZA65_RS03595 | | copper/silver response regulator transcription factor SilR | low | > 75 |
| Enterobacter asburiae PDN3 | 0.70 | EX28DRAFT_4025 | | ABC-type sugar transport system, ATPase component | 0.41 | EX28DRAFT_1165 | | heavy metal response regulator | low | > 76 |
| Enterobacter sp. TBS_079 | 0.70 | MPMX20_04618 | | Ribose import ATP-binding protein RbsA | 0.40 | MPMX20_02319 | | Transcriptional regulatory protein CusR | low | > 85 |
| Azospirillum sp. SherDot2 | 0.49 | MPMX19_03758 | | Ribose import ATP-binding protein RbsA | 0.47 | MPMX19_00794 | | Transcriptional activator protein CopR | low | > 112 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_3264 | | monosaccharide ABC transporter ATP-binding protein, CUT2 family | 0.42 | Psyr_3127 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_3264 | | monosaccharide ABC transporter ATP-binding protein, CUT2 family | 0.42 | Psyr_3127 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | low | > 86 |
| Pseudomonas simiae WCS417 | 0.48 | PS417_11890 | | Inositol transport system ATP-binding protein (from data) | 0.42 | PS417_11825 | | transcriptional regulator | low | > 88 |
| Ralstonia solanacearum IBSBF1503 | 0.48 | RALBFv3_RS15445 | | sugar ABC transporter ATP-binding protein | 0.50 | RALBFv3_RS17335 | | DNA-binding response regulator | low | > 76 |
| Ralstonia solanacearum UW163 | 0.48 | UW163_RS12905 | | sugar ABC transporter ATP-binding protein | 0.50 | UW163_RS21815 | | DNA-binding response regulator | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.48 | PFLU_RS12625 | | sugar ABC transporter ATP-binding protein | 0.42 | PFLU_RS12570 | | response regulator transcription factor | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.48 | PFLU_RS12625 | | sugar ABC transporter ATP-binding protein | 0.42 | PFLU_RS12570 | | response regulator transcription factor | low | > 109 |
| Ralstonia solanacearum PSI07 | 0.47 | RPSI07_RS17910 | | sugar ABC transporter ATP-binding protein | 0.50 | RPSI07_RS06365 | | DNA-binding response regulator | low | > 81 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.47 | H281DRAFT_00426 | | monosaccharide ABC transporter ATP-binding protein, CUT2 family | 0.35 | H281DRAFT_01736 | | two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.47 | Pf1N1B4_4286 | | Inositol transport system ATP-binding protein | 0.42 | Pf1N1B4_4267 | | DNA-binding response regulator | — | — |
| Burkholderia phytofirmans PsJN | 0.47 | BPHYT_RS20740 | | D-ribose transporter ATP binding protein | 0.38 | BPHYT_RS25955 | | transcriptional regulator | — | — |
| Phaeobacter inhibens DSM 17395 | 0.46 | PGA1_c23060 | | ribose import ATP-binding protein RbsA | 0.37 | PGA1_c13010 | | two-component system response regulator | low | > 62 |
| Paraburkholderia graminis OAS925 | 0.46 | ABIE53_002830 | | ribose transport system ATP-binding protein | 0.36 | ABIE53_005703 | | two-component system copper resistance phosphate regulon response regulator CusR | low | > 113 |
| Herbaspirillum seropedicae SmR1 | 0.45 | HSERO_RS05250 | | ABC transporter for L-fucose, ATPase component (from data) | 0.37 | HSERO_RS12420 | | transcriptional regulator | low | > 78 |
| Paraburkholderia sabiae LMG 24235 | 0.45 | QEN71_RS38600 | | sugar ABC transporter ATP-binding protein | 0.39 | QEN71_RS15305 | | heavy metal response regulator transcription factor | low | > 153 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.44 | ABZR88_RS15225 | | sugar ABC transporter ATP-binding protein | 0.43 | ABZR88_RS15000 | | response regulator transcription factor | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.43 | Echvi_1282 | | ABC-type sugar transport system, ATPase component | 0.40 | Echvi_2622 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | low | > 79 |
| Dyella japonica UNC79MFTsu3.2 | 0.43 | ABZR86_RS14415 | | D-xylose ABC transporter ATP-binding protein | 0.38 | ABZR86_RS12570 | | response regulator transcription factor | low | > 74 |
| Azospirillum brasilense Sp245 | 0.41 | AZOBR_RS31245 | | ABC transporter ATP-binding protein | 0.48 | AZOBR_RS10800 | | XRE family transcriptional regulator | low | > 97 |
| Variovorax sp. SCN45 | 0.41 | GFF5195 | | L-arabinose ABC transporter, ATP-binding protein AraG | 0.41 | GFF4686 | | Copper-sensing two-component system response regulator CusR | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.40 | Ac3H11_609 | | L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2) | 0.39 | Ac3H11_4210 | | DNA-binding heavy metal response regulator | low | > 79 |
| Rhodospirillum rubrum S1H | 0.39 | Rru_A0249 | | ABC transporter component (NCBI) | 0.47 | Rru_A2913 | | Two component Transcriptional regulator, Winged helix family (NCBI) | low | > 58 |
| Pseudomonas fluorescens GW456-L13 | 0.38 | PfGW456L13_2121 | | L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2) | 0.40 | PfGW456L13_4017 | | Copper-sensing two-component system response regulator CusR | low | > 87 |
| Caulobacter crescentus NA1000 Δfur | 0.37 | CCNA_00903 | | inositol transport ATP-binding protein IatA | 0.54 | CCNA_01351 | | two-component response regulator protein | low | > 67 |
| Caulobacter crescentus NA1000 | 0.37 | CCNA_00903 | | inositol transport ATP-binding protein IatA | 0.54 | CCNA_01351 | | two-component response regulator protein | low | > 66 |
| Pseudomonas putida KT2440 | 0.36 | PP_2759 | | ribose ABC transporter - ATP-binding subunit | 0.42 | PP_1438 | | response regulator | low | > 96 |
| Shewanella sp. ANA-3 | 0.36 | Shewana3_2074 | | L-arabinose ABC transporter, ATPase component AraV (from data) | 0.40 | Shewana3_4296 | | DNA-binding transcriptional activator CusR (RefSeq) | low | > 73 |
| Bosea sp. OAE506 | 0.35 | ABIE41_RS06845 | | sugar ABC transporter ATP-binding protein | 0.52 | ABIE41_RS01150 | | response regulator transcription factor | low | > 77 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.35 | GFF199 | | Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) | 0.40 | GFF1120 | | DNA-binding heavy metal response regulator | low | > 90 |
| Rhodopseudomonas palustris CGA009 | 0.25 | TX73_023765 | | ABC transporter ATP-binding protein | 0.43 | TX73_009945 | | response regulator transcription factor | low | > 86 |
Not shown: 10 genomes with orthologs for CSW01_14650 only; 33 genomes with orthologs for CSW01_15165 only