Conservation of cofitness between CSW01_02770 and CSW01_14910 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02770 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 1.0 CSW01_14910 cold-shock protein 0.42 16
Shewanella loihica PV-4 0.58 Shew_1860 alpha/beta hydrolase fold (RefSeq) 0.74 Shew_1614 cold-shock DNA-binding domain-containing protein (RefSeq) — —
Shewanella sp. ANA-3 0.57 Shewana3_1910 alpha/beta hydrolase fold (RefSeq) 0.73 Shewana3_2569 cold-shock DNA-binding protein family protein (RefSeq) — —
Shewanella oneidensis MR-1 0.56 SO2473 hydrolase, alpha/beta fold family (NCBI ptt file) 0.73 SO2787 cold shock domain family protein (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.50 Sama_1645 alpha/beta hydrolase fold (RefSeq) 0.71 Sama_1970 cold-shock DNA-binding domain-containing protein (RefSeq) — —
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS09135 alpha/beta fold hydrolase 0.69 PFLU_RS21685 cold-shock protein low > 109
Pseudomonas fluorescens SBW25 0.45 PFLU_RS09135 alpha/beta fold hydrolase 0.69 PFLU_RS21685 cold-shock protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_2401 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) 0.66 Pf6N2E2_2967 Cold shock protein CspA low > 103
Pseudomonas sp. RS175 0.44 PFR28_01026 Arylesterase 0.66 PFR28_03386 Major cold shock protein CspA low > 88
Pseudomonas orientalis W4I3 0.44 QF045_RS11770 alpha/beta fold hydrolase 0.67 QF045_RS08985 cold-shock protein low > 93
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_0031 Alpha/beta hydrolase fold protein 0.66 Psyr_3884 cold-shock DNA-binding protein family — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_0031 Alpha/beta hydrolase fold protein 0.66 Psyr_3884 cold-shock DNA-binding protein family — —
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_02885 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.66 AO356_18155 cold-shock protein low > 104
Pseudomonas simiae WCS417 0.43 PS417_09080 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.66 PS417_06370 cold-shock protein low > 88
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.2890.1 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) 0.64 Xcc-8004.2268.1 hypothetical protein — —
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_19350 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.67 AO353_16395 cold-shock protein — —
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_2295 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) 0.66 PfGW456L13_4642 Cold shock protein CspA low > 87
Pseudomonas sp. DMC3 0.39 GFF4552 3-oxoadipate enol-lactonase 2 0.67 GFF5172 Major cold shock protein CspA low > 89
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_213 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) 0.66 Pf1N1B4_624 Cold shock protein CspA — —
Fusobacterium nucleatum SB010 0.32 HUW76_06840 alpha/beta hydrolase 0.64 HUW76_07435 cold-shock protein low > 35
Marinobacter adhaerens HP15 0.23 HP15_2799 hydrolase, alpha/beta fold family 0.74 HP15_861 cold shock, CspA low > 73
Acinetobacter baumannii LAC-4 0.16 RR41_RS13790 3-oxoadipate enol-lactonase 0.63 RR41_RS06300 cold-shock protein low > 55
Pseudomonas putida KT2440 0.16 PP_3645 putative L-proline amide hydrolase 0.67 PP_1522 major cold shock protein low > 96
Pseudomonas stutzeri RCH2 0.15 Psest_3069 3-oxoadipate enol-lactonase 0.69 Psest_1615 Cold shock proteins — —
Pseudomonas sp. BP01 0.15 JOY50_RS07685 alpha/beta fold hydrolase 0.66 JOY50_RS26120 cold-shock protein low > 84
Pseudomonas aeruginosa PA14 0.14 IKLFDK_23025 3-oxoadipate enol-lactonase 0.70 IKLFDK_23150 cold-shock protein low > 98
Pseudomonas aeruginosa MRSN321 0.14 DY961_RS22405 pcaD;go_function=3-oxoadipate 3-oxoadipate enol-lactonase 0.70 DY961_RS22270 cold-shock protein low > 100
Pseudomonas aeruginosa PUPa3 0.14 DQ20_RS36920 pcaD;go_function=3-oxoadipate 3-oxoadipate enol-lactonase 0.70 DQ20_RS37050 cold-shock protein low > 101
Acinetobacter radioresistens SK82 0.14 MPMX26_01888 3-oxoadipate enol-lactonase 2 0.70 MPMX26_01347 Cold shock protein CspV — —
Pseudomonas segetis P6 0.14 ACVTMO_RS13475 pcaD 3-oxoadipate enol-lactonase 0.67 ACVTMO_RS17195 cold-shock protein low > 75
Pseudomonas sp. SVBP6 0.14 COO64_RS24465 alpha/beta fold hydrolase 0.68 COO64_RS19570 cold-shock protein low > 93
Lysobacter sp. OAE881 0.12 ABIE51_RS00655 alpha/beta hydrolase 0.70 ABIE51_RS18590 cold-shock protein — —
Rhodanobacter denitrificans MT42 0.12 LRK55_RS06025 alpha/beta fold hydrolase 0.66 LRK55_RS14490 cold-shock protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.12 LRK54_RS06280 alpha/beta hydrolase 0.66 LRK54_RS14775 cold-shock protein low > 59
Pedobacter sp. GW460-11-11-14-LB5 0.12 CA265_RS12370 alpha/beta hydrolase 0.47 CA265_RS06265 cold-shock protein low > 88
Rhodanobacter sp000427505 FW510-R12 0.11 LRK53_RS17570 alpha/beta hydrolase 0.66 LRK53_RS13820 cold-shock protein low > 59
Rhodanobacter sp. FW510-T8 0.11 OKGIIK_00355 Alpha/beta hydrolase 0.65 OKGIIK_03600 cspC cold-shock protein low > 53

Not shown: 34 genomes with orthologs for CSW01_02770 only; 5 genomes with orthologs for CSW01_14910 only