Conservation of cofitness between CSW01_06735 and CSW01_13635 in Vibrio cholerae E7946 ATCC 55056

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06735 methylisocitrate lyase 1.0 CSW01_13635 thiol:disulfide interchange protein DsbD 0.86 16
Marinobacter adhaerens HP15 0.68 HP15_1932 methylisocitrate lyase 2 0.30 HP15_2101 membrane protein containing cytochrome c assembly protein, transmembrane region domain — —
Alteromonas macleodii MIT1002 0.67 MIT1002_03129 Methylisocitrate lyase 0.38 MIT1002_03939 Thiol:disulfide interchange protein DsbD precursor — —
Shewanella loihica PV-4 0.67 Shew_1820 prpB 2-methylisocitrate lyase (RefSeq) 0.42 Shew_3266 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 60
Kangiella aquimarina DSM 16071 0.64 B158DRAFT_1343 methylisocitrate lyase 0.32 B158DRAFT_0153 Thiol:disulfide interchange protein low > 40
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_00900 2-methylisocitrate lyase 0.25 AO353_19365 thiol:disulfide interchange protein low > 101
Pseudomonas sp. RS175 0.64 PFR28_02928 2-methylisocitrate lyase 0.27 PFR28_01029 Thiol:disulfide interchange protein DsbD — —
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_20865 2-methylisocitrate lyase 0.28 AO356_02870 thiol:disulfide interchange protein — —
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_3819 Methylisocitrate lyase (EC 4.1.3.30) 0.27 Pf1N1B4_210 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 87
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_6061 Methylisocitrate lyase (EC 4.1.3.30) (from data) 0.28 Pf6N2E2_2398 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) — —
Pseudomonas protegens RBAN4 0.63 FABNJH_09625 prpB methylisocitrate lyase 0.27 FABNJH_21580 dsbD Thiol:disulfide interchange protein DsbD — —
Pseudomonas sp. DMC3 0.63 GFF5230 2-methylisocitrate lyase 0.29 GFF4549 Thiol:disulfide interchange protein DsbD — —
Pseudomonas simiae WCS417 0.63 PS417_21080 2-methylisocitrate lyase 0.26 PS417_19525 thiol:disulfide interchange protein — —
Pseudomonas stutzeri RCH2 0.63 Psest_2321 methylisocitrate lyase 0.27 Psest_1603 Thiol:disulfide interchange protein low > 67
Pseudomonas putida KT2440 0.63 PP_2334 2-methylisocitrate lyase 0.25 PP_0561 thiol/disulfide interchange protein 1 low > 96
Shewanella sp. ANA-3 0.63 Shewana3_3825 prpB 2-methylisocitrate lyase (RefSeq) 0.43 Shewana3_3576 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 73
Pseudomonas sp. BP01 0.63 JOY50_RS25750 prpB methylisocitrate lyase 0.26 JOY50_RS23140 protein-disulfide reductase DsbD low > 84
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS15660 2-methylisocitrate lyase 0.29 HSERO_RS00715 thiol:disulfide interchange protein — —
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS02670 methylisocitrate lyase 0.27 RALBFv3_RS07045 protein-disulfide reductase DsbD 0.55 29
Shewanella oneidensis MR-1 0.63 SO0345 prpB methylisocitrate lyase (NCBI ptt file) 0.44 SO0696 dsbD thiol:disulfide interchange protein DsbD (NCBI ptt file) low > 76
Ralstonia solanacearum UW163 0.63 UW163_RS11055 methylisocitrate lyase 0.27 UW163_RS06570 protein-disulfide reductase DsbD — —
Pseudomonas orientalis W4I3 0.63 QF045_RS22905 methylisocitrate lyase 0.26 QF045_RS21665 protein-disulfide reductase DsbD — —
Pseudomonas fluorescens GW456-L13 0.63 PfGW456L13_4118 Methylisocitrate lyase (EC 4.1.3.30) 0.28 PfGW456L13_2298 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 87
Pseudomonas fluorescens SBW25 0.62 PFLU_RS22690 methylisocitrate lyase 0.25 PFLU_RS21490 protein-disulfide reductase DsbD — —
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS22690 methylisocitrate lyase 0.25 PFLU_RS21490 protein-disulfide reductase DsbD — —
Ralstonia solanacearum PSI07 0.62 RPSI07_RS14645 methylisocitrate lyase 0.28 RPSI07_RS10195 protein-disulfide reductase DsbD low > 81
Pseudomonas lactucae CFBP13502 0.62 GEMAOFIL_04361 2-methylisocitrate lyase 0.25 GEMAOFIL_04105 Thiol:disulfide interchange protein DsbD — —
Pseudomonas segetis P6 0.62 ACVTMO_RS13040 prpB methylisocitrate lyase 0.26 ACVTMO_RS20330 protein-disulfide reductase DsbD — —
Methylophilus sp. DMC18 0.62 GFF469 2-methylisocitrate lyase 0.29 GFF2039 Thiol:disulfide interchange protein DsbD — —
Ralstonia solanacearum GMI1000 0.62 RS_RS10050 methylisocitrate lyase 0.27 RS_RS14985 thiol:disulfide interchange protein DsbD — —
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS14590 methylisocitrate lyase 0.28 ABZR87_RS02695 protein-disulfide reductase DsbD — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_03339 2-methylisocitrate lyase 0.47 OHPLBJKB_03907 Thiol:disulfide interchange protein DsbD low > 74
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS11260 Methylisocitrate lyase (EC 4.1.3.30) (from data) 0.29 RR42_RS19110 thiol:disulfide interchange protein — —
Escherichia fergusonii Becca 0.62 EFB2_03706 2-methylisocitrate lyase 0.47 EFB2_04399 Thiol:disulfide interchange protein DsbD low > 86
Escherichia coli BW25113 0.62 b0331 prpB 2-methylisocitrate lyase (NCBI) 0.47 b4136 dipZ thiol:disulfide interchange protein precursor (NCBI) low > 76
Escherichia coli BL21 0.62 ECD_00286 2-methylisocitrate lyase 0.47 ECD_04006 thiol:disulfide interchange protein and activator of DsbC low > 61
Escherichia coli ECOR38 0.62 HEPCGN_07485 prpB methylisocitrate lyase 0.46 HEPCGN_10675 dsbD protein-disulfide reductase DsbD low > 88
Escherichia coli ECRC62 0.62 BNILDI_23190 prpB methylisocitrate lyase 0.47 BNILDI_06775 dsbD protein-disulfide reductase DsbD low > 75
Escherichia coli ECOR27 0.62 NOLOHH_01775 prpB methylisocitrate lyase 0.47 NOLOHH_04715 dsbD protein-disulfide reductase DsbD 0.20 27
Escherichia coli ECRC98 0.61 JDDGAC_12555 prpB methylisocitrate lyase 0.47 JDDGAC_16085 dsbD protein-disulfide reductase DsbD low > 87
Shewanella amazonensis SB2B 0.61 Sama_3294 prpB 2-methylisocitrate lyase (RefSeq) 0.42 Sama_0538 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 62
Escherichia coli ECRC100 0.61 OKFHMN_08900 prpB methylisocitrate lyase 0.47 OKFHMN_12450 dsbD protein-disulfide reductase DsbD low > 79
Escherichia coli Nissle 1917 0.61 ECOLIN_RS02150 methylisocitrate lyase 0.47 ECOLIN_RS24030 protein-disulfide reductase DsbD low > 55
Escherichia coli ECRC101 0.61 MCAODC_28130 prpB methylisocitrate lyase 0.46 MCAODC_02960 dsbD protein-disulfide reductase DsbD low > 87
Escherichia coli ECRC102 0.61 NIAGMN_06955 prpB methylisocitrate lyase 0.47 NIAGMN_10295 dsbD protein-disulfide reductase DsbD low > 80
Escherichia coli ECRC99 0.61 KEDOAH_19065 prpB methylisocitrate lyase 0.47 KEDOAH_15715 dsbD protein-disulfide reductase DsbD — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF4263 Methylisocitrate lyase (EC 4.1.3.30) 0.46 GFF2016 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 78
Castellaniella sp019104865 MT123 0.58 ABCV34_RS01670 methylisocitrate lyase 0.27 ABCV34_RS03205 protein-disulfide reductase DsbD low > 48

Not shown: 27 genomes with orthologs for CSW01_06735 only; 18 genomes with orthologs for CSW01_13635 only