Conservation of cofitness between CSW01_00065 and CSW01_13635 in Vibrio cholerae E7946 ATCC 55056

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00065 DNA replication and repair protein RecF 1.0 CSW01_13635 thiol:disulfide interchange protein DsbD 0.69 3
Erwinia amylovora T8 0.57 OLJFJH_05150 DNA replication/repair protein RecF 0.42 OLJFJH_02625 protein-disulfide reductase DsbD low > 58
Serratia liquefaciens MT49 0.56 IAI46_00015 DNA replication/repair protein RecF 0.45 IAI46_01465 protein-disulfide reductase DsbD low > 86
Pantoea sp. MT58 0.56 IAI47_00015 DNA replication/repair protein RecF 0.43 IAI47_17335 protein-disulfide reductase DsbD low > 76
Rahnella sp. WP5 0.55 EX31_RS05975 DNA replication/repair protein RecF 0.46 EX31_RS08975 protein-disulfide reductase DsbD low > 89
Erwinia tracheiphila SCR3 0.55 LU632_RS00015 recF DNA replication/repair protein RecF 0.40 LU632_RS01840 protein-disulfide reductase DsbD low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_00003 DNA replication and repair protein RecF 0.47 OHPLBJKB_03907 Thiol:disulfide interchange protein DsbD low > 73
Escherichia coli ECRC98 0.55 JDDGAC_18645 recF DNA replication/repair protein RecF 0.47 JDDGAC_16085 dsbD protein-disulfide reductase DsbD low > 86
Escherichia coli ECRC100 0.55 OKFHMN_15025 recF DNA replication/repair protein RecF 0.47 OKFHMN_12450 dsbD protein-disulfide reductase DsbD low > 80
Escherichia coli ECOR38 0.55 HEPCGN_13720 recF DNA replication/repair protein RecF 0.46 HEPCGN_10675 dsbD protein-disulfide reductase DsbD low > 87
Escherichia coli BL21 0.55 ECD_03583 gap repair protein 0.47 ECD_04006 thiol:disulfide interchange protein and activator of DsbC low > 61
Escherichia fergusonii Becca 0.55 EFB2_00003 DNA replication and repair protein RecF 0.47 EFB2_04399 Thiol:disulfide interchange protein DsbD low > 86
Escherichia coli ECRC99 0.55 KEDOAH_13125 recF DNA replication/repair protein RecF 0.47 KEDOAH_15715 dsbD protein-disulfide reductase DsbD — —
Escherichia coli BW25113 0.55 b3700 recF recombination protein F (NCBI) 0.47 b4136 dipZ thiol:disulfide interchange protein precursor (NCBI) low > 76
Escherichia coli ECRC62 0.55 BNILDI_04365 recF DNA replication/repair protein RecF 0.47 BNILDI_06775 dsbD protein-disulfide reductase DsbD low > 75
Escherichia coli ECOR27 0.55 NOLOHH_07165 recF DNA replication/repair protein RecF 0.47 NOLOHH_04715 dsbD protein-disulfide reductase DsbD low > 75
Escherichia coli ECRC102 0.55 NIAGMN_12780 recF DNA replication/repair protein RecF 0.47 NIAGMN_10295 dsbD protein-disulfide reductase DsbD — —
Escherichia coli Nissle 1917 0.55 ECOLIN_RS21310 DNA replication/repair protein RecF 0.47 ECOLIN_RS24030 protein-disulfide reductase DsbD low > 55
Escherichia coli ECRC101 0.55 MCAODC_05535 recF DNA replication/repair protein RecF 0.46 MCAODC_02960 dsbD protein-disulfide reductase DsbD low > 87
Dickeya dadantii 3937 0.55 DDA3937_RS21285 DNA replication/repair protein RecF 0.43 DDA3937_RS02705 protein-disulfide reductase DsbD low > 74
Pectobacterium carotovorum WPP14 0.55 HER17_RS00015 DNA replication/repair protein RecF 0.47 HER17_RS18850 protein-disulfide reductase DsbD low > 75
Dickeya dianthicola ME23 0.55 DZA65_RS00015 DNA replication/repair protein RecF 0.42 DZA65_RS02835 protein-disulfide reductase DsbD low > 75
Dickeya dianthicola 67-19 0.55 HGI48_RS00015 DNA replication/repair protein RecF 0.42 HGI48_RS02680 protein-disulfide reductase DsbD low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF1756 DNA recombination and repair protein RecF 0.46 GFF2016 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 78
Klebsiella michiganensis M5al 0.54 BWI76_RS00010 DNA replication and repair protein RecF 0.47 BWI76_RS02315 protein-disulfide reductase DsbD low > 92
Enterobacter sp. TBS_079 0.54 MPMX20_00003 DNA replication and repair protein RecF 0.45 MPMX20_00416 Thiol:disulfide interchange protein DsbD low > 85
Enterobacter asburiae PDN3 0.54 EX28DRAFT_3987 DNA replication and repair protein RecF 0.46 EX28DRAFT_3333 Thiol:disulfide interchange protein low > 76
Shewanella loihica PV-4 0.46 Shew_0003 DNA replication and repair protein RecF (RefSeq) 0.42 Shew_3266 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 60
Shewanella oneidensis MR-1 0.45 SO0010 recF DNA replication and repair protein RecF (NCBI ptt file) 0.44 SO0696 dsbD thiol:disulfide interchange protein DsbD (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.45 Shewana3_0011 recF recombination protein F (RefSeq) 0.43 Shewana3_3576 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 73
Shewanella amazonensis SB2B 0.44 Sama_0015 recF recombination protein F (RefSeq) 0.42 Sama_0538 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 62
Pseudomonas aeruginosa PA14 0.38 IKLFDK_25545 DNA replication/repair protein RecF 0.24 IKLFDK_12170 Thiol:disulfide interchange protein DsbD 2 low > 101
Pseudomonas sp. S08-1 0.38 OH686_12620 DNA recombination and repair protein RecF 0.23 OH686_07580 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase — —
Pseudomonas stutzeri RCH2 0.38 Psest_0004 recF protein 0.27 Psest_1603 Thiol:disulfide interchange protein low > 67
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_1927 DNA recombination and repair protein RecF 0.27 Pf1N1B4_210 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 87
Pseudomonas sp. BP01 0.38 JOY50_RS08340 recF DNA replication/repair protein RecF 0.26 JOY50_RS23140 protein-disulfide reductase DsbD low > 84
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_0003 DNA replication and repair protein RecF 0.24 Psyr_4398 Protein-disulfide reductase — —
Pseudomonas sp. DMC3 0.38 GFF578 DNA replication and repair protein RecF 0.29 GFF4549 Thiol:disulfide interchange protein DsbD — —
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_0003 DNA replication and repair protein RecF 0.24 Psyr_4398 Protein-disulfide reductase — —
Pseudomonas sp. RS175 0.38 PFR28_04593 DNA replication and repair protein RecF 0.27 PFR28_01029 Thiol:disulfide interchange protein DsbD — —
Pseudomonas fluorescens SBW25 0.37 PFLU_RS00015 DNA replication/repair protein RecF 0.25 PFLU_RS21490 protein-disulfide reductase DsbD — —
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS00015 DNA replication/repair protein RecF 0.25 PFLU_RS21490 protein-disulfide reductase DsbD — —
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_11635 recombinase RecF 0.28 AO356_02870 thiol:disulfide interchange protein — —
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_10480 recombinase RecF 0.25 AO353_19365 thiol:disulfide interchange protein low > 101
Pseudomonas putida KT2440 0.37 PP_0012 DNA replication and repair protein 0.25 PP_0561 thiol/disulfide interchange protein 1 low > 96
Pseudomonas sp. SVBP6 0.37 COO64_RS02120 recF DNA replication/repair protein RecF 0.24 COO64_RS18765 dsbD protein-disulfide reductase DsbD low > 93
Pseudomonas simiae WCS417 0.37 PS417_00015 recombinase RecF 0.26 PS417_19525 thiol:disulfide interchange protein — —
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_664 DNA recombination and repair protein RecF 0.28 PfGW456L13_2298 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 87
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_4197 DNA recombination and repair protein RecF 0.28 Pf6N2E2_2398 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) — —
Alteromonas macleodii MIT1002 0.35 MIT1002_00003 DNA replication and repair protein RecF 0.38 MIT1002_03939 Thiol:disulfide interchange protein DsbD precursor — —
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_0366 DNA replication and repair protein RecF 0.32 B158DRAFT_0153 Thiol:disulfide interchange protein low > 40
Acinetobacter radioresistens SK82 0.30 MPMX26_00003 DNA replication and repair protein RecF 0.21 MPMX26_03164 Thiol:disulfide interchange protein DsbD low > 36
Marinobacter adhaerens HP15 0.29 HP15_3705 DNA replication and repair protein recF 0.30 HP15_2101 membrane protein containing cytochrome c assembly protein, transmembrane region domain low > 73
Brevundimonas sp. GW460-12-10-14-LB2 0.12 A4249_RS15360 DNA replication/repair protein RecF 0.17 A4249_RS11500 protein-disulfide reductase DsbD low > 48

Not shown: 36 genomes with orthologs for CSW01_00065 only; 14 genomes with orthologs for CSW01_13635 only