| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_14050 | | ribosomal RNA small subunit methyltransferase G | 1.0 | CSW01_13525 | | DNA-binding transcriptional regulator CytR | 0.75 | 7 |
| Serratia liquefaciens MT49 | 0.67 | IAI46_25115 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.69 | IAI46_24560 | | DNA-binding transcriptional regulator CytR | low | > 86 |
| Rahnella sp. WP5 | 0.67 | EX31_RS06135 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.70 | EX31_RS14230 | | DNA-binding transcriptional regulator CytR | low | > 89 |
| Pantoea sp. MT58 | 0.65 | IAI47_00295 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.66 | IAI47_00860 | | DNA-binding transcriptional regulator CytR | low | > 76 |
| Erwinia amylovora T8 | 0.65 | OLJFJH_05315 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.64 | OLJFJH_06075 | | DNA-binding transcriptional regulator CytR | low | > 58 |
| Pantoea agglomerans CFBP13505 P0401 | 0.64 | PagCFBP13505_RS19040 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.66 | PagCFBP13505_RS18480 | | DNA-binding transcriptional regulator CytR | low | > 74 |
| Klebsiella michiganensis M5al | 0.63 | BWI76_RS00225 | | 16S rRNA methyltransferase G | 0.68 | BWI76_RS00765 | | DNA-binding transcriptional regulator CytR | low | > 92 |
| Dickeya dadantii 3937 | 0.63 | DDA3937_RS21600 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.61 | DDA3937_RS00930 | | DNA-binding transcriptional regulator CytR | low | > 74 |
| Escherichia coli BW25113 | 0.63 | b3740 | gidB | glucose-inhibited division protein B (NCBI) | 0.67 | b3934 | cytR | DNA-binding transcriptional dual regulator (NCBI) | low | > 76 |
| Escherichia coli ECRC98 | 0.63 | JDDGAC_18410 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.67 | JDDGAC_17350 | cytR | DNA-binding transcriptional regulator CytR | low | > 87 |
| Escherichia fergusonii Becca | 0.63 | EFB2_04893 | | Ribosomal RNA small subunit methyltransferase G | 0.67 | EFB2_04684 | | HTH-type transcriptional repressor CytR | 0.36 | 79 |
| Escherichia coli ECRC101 | 0.63 | MCAODC_05295 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.67 | MCAODC_04225 | cytR | DNA-binding transcriptional regulator CytR | low | > 88 |
| Escherichia coli ECOR27 | 0.63 | NOLOHH_06925 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.67 | NOLOHH_05870 | cytR | DNA-binding transcriptional regulator CytR | low | > 76 |
| Escherichia coli Nissle 1917 | 0.63 | ECOLIN_RS21510 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.67 | ECOLIN_RS22650 | | DNA-binding transcriptional regulator CytR | low | > 55 |
| Escherichia coli ECRC100 | 0.63 | OKFHMN_14790 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.67 | OKFHMN_13725 | cytR | DNA-binding transcriptional regulator CytR | low | > 79 |
| Escherichia coli ECRC99 | 0.63 | KEDOAH_13360 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.67 | KEDOAH_14435 | cytR | DNA-binding transcriptional regulator CytR | — | — |
| Escherichia coli BL21 | 0.63 | ECD_03624 | | 16S rRNA m(7)G527 methyltransferase, SAM-dependent; glucose-inhibited cell-division protein | 0.67 | ECD_03819 | | Anti-activator for CytR-CRP nucleoside utilization regulon | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.63 | OHPLBJKB_04313 | | Ribosomal RNA small subunit methyltransferase G | 0.67 | OHPLBJKB_04117 | | HTH-type transcriptional repressor CytR | low | > 74 |
| Escherichia coli ECRC102 | 0.63 | NIAGMN_12545 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.67 | NIAGMN_11480 | cytR | DNA-binding transcriptional regulator CytR | low | > 80 |
| Escherichia coli ECRC62 | 0.63 | BNILDI_04600 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.67 | BNILDI_05660 | cytR | DNA-binding transcriptional regulator CytR | low | > 75 |
| Enterobacter sp. TBS_079 | 0.62 | MPMX20_04627 | | Ribosomal RNA small subunit methyltransferase G | 0.68 | MPMX20_04535 | | HTH-type transcriptional repressor CytR | low | > 85 |
| Enterobacter asburiae PDN3 | 0.62 | EX28DRAFT_4016 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.67 | EX28DRAFT_4407 | | Transcriptional regulators | low | > 76 |
| Escherichia coli ECOR38 | 0.62 | HEPCGN_13505 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.67 | HEPCGN_12370 | cytR | DNA-binding transcriptional regulator CytR | low | > 88 |
| Shewanella loihica PV-4 | 0.62 | Shew_3855 | gidB | glucose-inhibited division protein B (RefSeq) | 0.21 | Shew_1870 | | LacI family transcription regulator (RefSeq) | low | > 60 |
| Pectobacterium carotovorum WPP14 | 0.62 | HER17_RS21605 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.66 | HER17_RS00865 | | DNA-binding transcriptional regulator CytR | low | > 75 |
| Dickeya dianthicola 67-19 | 0.62 | HGI48_RS21385 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.61 | HGI48_RS20445 | | DNA-binding transcriptional regulator CytR | 0.59 | 56 |
| Klebsiella pneumoniae MKP103 | 0.62 | KDGMDA_08835 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.67 | KDGMDA_09275 | | DNA-binding transcriptional regulator CytR | low | > 95 |
| Dickeya dianthicola ME23 | 0.61 | DZA65_RS22365 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.61 | DZA65_RS21490 | | DNA-binding transcriptional regulator CytR | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.61 | GFF1717 | | rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB | 0.66 | GFF2316 | | Transcriptional (co)regulator CytR | low | > 78 |
| Erwinia tracheiphila SCR3 | 0.59 | LU632_RS24810 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.64 | LU632_RS19660 | cytR | DNA-binding transcriptional regulator CytR | low | > 74 |
| Erwinia tracheiphila HP pepo 2.2 | 0.58 | IJEDHG_09155 | rsmG | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.64 | IJEDHG_13000 | cytR | DNA-binding transcriptional regulator CytR | low | > 61 |
| Shewanella amazonensis SB2B | 0.56 | Sama_3654 | gidB | 16S rRNA methyltransferase GidB (RefSeq) | 0.36 | Sama_0294 | | LacI family transcription regulator (RefSeq) | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.55 | MIT1002_04123 | | Ribosomal RNA small subunit methyltransferase G | 0.39 | MIT1002_00363 | | HTH-type transcriptional repressor CytR | low | > 70 |
| Pseudomonas fluorescens FW300-N2E2 | 0.46 | Pf6N2E2_4204 | | rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB | 0.39 | Pf6N2E2_322 | | Transcriptional regulator, LacI family | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.46 | AO356_11670 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.40 | AO356_22285 | | LacI family transcriptional regulator | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.45 | Pf1N1B4_1935 | | rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB | 0.38 | Pf1N1B4_4095 | | Transcriptional regulator, LacI family | — | — |
| Pseudomonas sp. RS175 | 0.45 | PFR28_04586 | | Ribosomal RNA small subunit methyltransferase G | 0.40 | PFR28_02584 | | HTH-type transcriptional repressor CytR | low | > 88 |
| Dyella japonica UNC79MFTsu3.2 | 0.44 | ABZR86_RS14875 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.47 | ABZR86_RS01690 | | LacI family DNA-binding transcriptional regulator | low | > 74 |
| Pseudomonas sp. DMC3 | 0.43 | GFF568 | | Ribosomal RNA small subunit methyltransferase G | 0.38 | GFF1074 | | HTH-type transcriptional repressor CytR | low | > 89 |
| Paraburkholderia sabiae LMG 24235 | 0.38 | QEN71_RS29340 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.36 | QEN71_RS25305 | | LacI family DNA-binding transcriptional regulator | low | > 153 |
| Lysobacter sp. OAE881 | 0.38 | ABIE51_RS01740 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.26 | ABIE51_RS10155 | | LacI family DNA-binding transcriptional regulator | low | > 62 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.37 | H281DRAFT_02386 | | 16S rRNA m(7)G-527 methyltransferase (EC 2.1.1.170) | 0.34 | H281DRAFT_00103 | | transcriptional regulator, LacI family | low | > 103 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.37 | Xcc-8004.5135.1 | | rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB | 0.24 | Xcc-8004.1274.1 | | transcriptional regulator lacI family | low | > 74 |
| Paraburkholderia graminis OAS925 | 0.37 | ABIE53_000263 | | 16S rRNA (guanine527-N7)-methyltransferase | 0.33 | ABIE53_001217 | | LacI family repressor for deo operon, udp, cdd, tsx, nupC, and nupG | low | > 113 |
| Cupriavidus basilensis FW507-4G11 | 0.35 | RR42_RS20210 | | 16S rRNA methyltransferase | 0.27 | RR42_RS27820 | | GntR family transcriptional regulator | low | > 128 |
| Burkholderia phytofirmans PsJN | 0.35 | BPHYT_RS19435 | | 16S rRNA methyltransferase | 0.35 | BPHYT_RS04680 | | LacI family transcriptional regulator | low | > 109 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.32 | GFF2017 | | rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB | 0.23 | GFF4454 | | Transcriptional regulator, LacI family | low | > 90 |
| Phocaeicola dorei CL03T12C01 | 0.20 | ABI39_RS15110 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.26 | ABI39_RS03985 | | LacI family DNA-binding transcriptional regulator | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.20 | HMPREF1058_RS18790 | | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | 0.26 | HMPREF1058_RS09530 | | LacI family DNA-binding transcriptional regulator | low | > 67 |
Not shown: 40 genomes with orthologs for CSW01_14050 only; 20 genomes with orthologs for CSW01_13525 only