Conservation of cofitness between CSW01_10060 and CSW01_13325 in Vibrio cholerae E7946 ATCC 55056

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10060 YchF/TatD family DNA exonuclease 1.0 CSW01_13325 pilus assembly protein PilN 0.43 13
Shewanella amazonensis SB2B 0.57 Sama_2040 TatD family hydrolase (RefSeq) 0.25 Sama_3372 type IV pilus biogenesis protein PilN (RefSeq) low > 62
Shewanella oneidensis MR-1 0.54 SO2610 hydrolase, TatD family (NCBI ptt file) 0.24 SO0282 type IV pilus biogenesis protein PilN (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.53 MIT1002_01740 putative deoxyribonuclease YcfH 0.25 MIT1002_00452 Fimbrial assembly protein (PilN) low > 70
Shewanella sp. ANA-3 0.53 Shewana3_1769 TatD family hydrolase (RefSeq) 0.25 Shewana3_3898 fimbrial assembly family protein (RefSeq) low > 73
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_1745 hydrolase, TatD family 0.21 B158DRAFT_0759 Tfp pilus assembly protein PilN low > 40
Shewanella loihica PV-4 0.53 Shew_1582 TatD family hydrolase (RefSeq) 0.24 Shew_0209 fimbrial assembly family protein (RefSeq) low > 60
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_5960 Putative deoxyribonuclease YcfH 0.16 Pf6N2E2_3759 Type IV pilus biogenesis protein PilN low > 103
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_20205 hydrolase TatD 0.16 AO356_09410 pilus assembly protein PilN low > 104
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_01325 hydrolase TatD 0.18 AO353_12480 pilus assembly protein PilN low > 101
Pseudomonas sp. RS175 0.51 PFR28_03002 putative metal-dependent hydrolase YcfH 0.20 PFR28_05008 hypothetical protein low > 88
Pseudomonas segetis P6 0.51 ACVTMO_RS10350 TatD family hydrolase 0.23 ACVTMO_RS21020 pilN type 4a pilus biogenesis protein PilN low > 75
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS23020 TatD family hydrolase 0.17 PFLU_RS02010 fimbriae biosynthesis protein low > 109
Pseudomonas fluorescens SBW25 0.51 PFLU_RS23020 TatD family hydrolase 0.17 PFLU_RS02010 fimbriae biosynthesis protein low > 109
Pseudomonas simiae WCS417 0.51 PS417_21405 hydrolase TatD 0.17 PS417_01965 fimbriae biosynthesis protein low > 88
Pseudomonas putida KT2440 0.51 PP_1967 tRNA D-aminoacylase 0.18 PP_5082 Type IV pili biogenesis protein PilN low > 96
Pseudomonas sp. BP01 0.51 JOY50_RS16755 TatD family hydrolase 0.15 JOY50_RS09285 PilN domain-containing protein low > 84
Pseudomonas stutzeri RCH2 0.51 Psest_1696 hydrolase, TatD family 0.23 Psest_3718 Tfp pilus assembly protein PilN low > 67
Pseudomonas aeruginosa PUPa3 0.50 DQ20_RS33405 TatD family hydrolase 0.23 DQ20_RS51040 pilN;inference=COORDINATES type 4a pilus biogenesis protein PilN 0.92 24
Pseudomonas aeruginosa MRSN321 0.50 DY961_RS02180 TatD family hydrolase 0.23 DY961_RS11035 pilN;inference=COORDINATES type 4a pilus biogenesis protein PilN 0.91 16
Pseudomonas lactucae CFBP13502 0.50 GEMAOFIL_04425 putative metal-dependent hydrolase YcfH 0.19 GEMAOFIL_00626 hypothetical protein — —
Pseudomonas aeruginosa PA14 0.50 IKLFDK_15055 hydrolase TatD 0.23 IKLFDK_28315 type 4a pilus biogenesis protein PilN 0.39 2
Pseudomonas sp. DMC3 0.50 GFF4749 putative metal-dependent hydrolase YcfH 0.19 GFF3095 hypothetical protein low > 89
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_2112 Putative deoxyribonuclease YcfH 0.19 PfGW456L13_280 Type IV pilus biogenesis protein PilN low > 87
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_1655 TatD-related deoxyribonuclease 0.23 Psyr_0404 Fimbrial assembly low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_1655 TatD-related deoxyribonuclease 0.23 Psyr_0404 Fimbrial assembly low > 86
Pseudomonas sp. S08-1 0.50 OH686_22180 Uncharacterized metal-dependent hydrolase YcfH 0.25 OH686_10045 Type IV pilus biogenesis protein PilN low > 80
Pseudomonas orientalis W4I3 0.49 QF045_RS23485 TatD family hydrolase 0.13 QF045_RS05030 PilN domain-containing protein low > 93
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_420 Putative deoxyribonuclease YcfH 0.22 Pf1N1B4_1542 Type IV pilus biogenesis protein PilN low > 87
Dechlorosoma suillum PS 0.49 Dsui_2652 hydrolase, TatD family 0.27 Dsui_1188 Tfp pilus assembly protein PilN 0.73 10
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS12460 TatD family hydrolase 0.18 ABZR87_RS02615 PilN domain-containing protein low > 80
Ralstonia solanacearum UW163 0.47 UW163_RS14320 TatD family deoxyribonuclease 0.18 UW163_RS06655 ferrous iron transporter B — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS01010 TatD family deoxyribonuclease 0.18 RALBFv3_RS06960 ferrous iron transporter B low > 76
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS10885 DNAase 0.17 RR42_RS19030 ferrous iron transporter B low > 128
Ralstonia solanacearum PSI07 0.47 RPSI07_RS16465 TatD family deoxyribonuclease 0.18 RPSI07_RS10275 ferrous iron transporter B low > 81
Ralstonia solanacearum GMI1000 0.47 RS_RS09020 TatD family deoxyribonuclease 0.19 RS_RS14905 ferrous iron transporter B low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF4665 Putative deoxyribonuclease YcfH 0.21 GFF1336 Type IV pilus biogenesis protein PilN low > 90
Variovorax sp. OAS795 0.42 ABID97_RS16000 TatD family hydrolase 0.18 ABID97_RS23280 PilN domain-containing protein low > 91
Variovorax sp. SCN45 0.42 GFF34 Uncharacterized metal-dependent hydrolase YcfH 0.18 GFF5320 Type IV pilus biogenesis protein PilN low > 127
Acinetobacter baumannii LAC-4 0.39 RR41_RS12075 TatD family hydrolase 0.18 RR41_RS01560 PilN domain-containing protein low > 55
Marinobacter adhaerens HP15 0.34 HP15_3420 hydrolase, TatD family 0.25 HP15_475 Tfp pilus assembly protein PilN low > 73

Not shown: 64 genomes with orthologs for CSW01_10060 only; 0 genomes with orthologs for CSW01_13325 only