Conservation of cofitness between CSW01_05580 and CSW01_13155 in Vibrio cholerae E7946 ATCC 55056

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05580 acetate kinase 1.0 CSW01_13155 ribonuclease R 0.89 1
Escherichia coli ECRC101 0.75 MCAODC_13835 ackA acetate kinase 0.62 MCAODC_02735 rnr ribonuclease R — —
Escherichia coli ECRC98 0.75 JDDGAC_26760 ackA acetate kinase 0.62 JDDGAC_15860 rnr ribonuclease R — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_01409 Acetate kinase 0.61 OHPLBJKB_03863 Ribonuclease R — —
Escherichia coli BW25113 0.75 b2296 ackA acetate kinase (NCBI) 0.61 b4179 vacB putative enzyme (VIMSS) — —
Escherichia coli BL21 0.75 ECD_02221 acetate kinase A and propionate kinase 2 0.61 ECD_04046 exoribonuclease R, RNase R — —
Escherichia coli ECRC100 0.75 OKFHMN_22795 ackA acetate kinase 0.62 OKFHMN_12220 rnr ribonuclease R — —
Escherichia coli ECOR27 0.75 NOLOHH_14415 ackA acetate kinase 0.61 NOLOHH_04485 rnr ribonuclease R — —
Escherichia coli ECRC99 0.75 KEDOAH_05400 ackA acetate kinase 0.62 KEDOAH_15935 rnr ribonuclease R — —
Escherichia coli Nissle 1917 0.75 ECOLIN_RS13330 acetate kinase 0.61 ECOLIN_RS24265 ribonuclease R low > 55
Escherichia coli ECOR38 0.75 HEPCGN_22000 ackA acetate kinase 0.61 HEPCGN_10450 rnr ribonuclease R low > 88
Escherichia coli ECRC62 0.75 BNILDI_13335 ackA acetate kinase 0.61 BNILDI_07005 rnr ribonuclease R — —
Escherichia fergusonii Becca 0.75 EFB2_01562 Acetate kinase 0.61 EFB2_04356 Ribonuclease R low > 86
Escherichia coli ECRC102 0.75 NIAGMN_20565 ackA acetate kinase 0.62 NIAGMN_10070 rnr ribonuclease R — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF1900 Acetate kinase (EC 2.7.2.1) 0.61 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 0.85 50
Enterobacter asburiae PDN3 0.74 EX28DRAFT_0313 acetate kinase 0.60 EX28DRAFT_3376 ribonuclease R low > 76
Klebsiella pneumoniae MRSN742743 0.74 GJGHJB_01480 ackA acetate kinase 0.61 GJGHJB_04566 rnr ribonuclease R — —
Enterobacter sp. TBS_079 0.74 MPMX20_03226 Acetate kinase 0.60 MPMX20_00460 Ribonuclease R low > 85
Klebsiella pneumoniae MKP103 0.74 KDGMDA_27110 acetate kinase 0.61 KDGMDA_11075 ribonuclease R low > 94
Klebsiella michiganensis M5al 0.74 BWI76_RS20235 acetate kinase 0.61 BWI76_RS02575 exoribonuclease R — —
Serratia liquefaciens MT49 0.73 IAI46_17750 acetate kinase 0.60 IAI46_01660 ribonuclease R low > 87
Erwinia amylovora T8 0.73 OLJFJH_11365 acetate kinase 0.62 OLJFJH_02470 ribonuclease R low > 58
Dickeya dadantii 3937 0.73 DDA3937_RS14380 acetate kinase 0.61 DDA3937_RS17260 ribonuclease R low > 74
Pantoea agglomerans CFBP13505 P0401 0.73 PagCFBP13516_RS06535 ackA acetate kinase 0.60 PagCFBP13516_RS02640 rnr ribonuclease R low > 80
Dickeya dianthicola 67-19 0.73 HGI48_RS14350 acetate kinase 0.61 HGI48_RS17315 ribonuclease R low > 71
Pantoea sp. MT58 0.72 IAI47_06325 acetate kinase 0.60 IAI47_02625 ribonuclease R low > 76
Dickeya dianthicola ME23 0.72 DZA65_RS15280 acetate kinase 0.61 DZA65_RS18405 ribonuclease R low > 75
Erwinia tracheiphila SCR3 0.71 LU632_RS07925 ackA acetate kinase 0.61 LU632_RS21750 rnr ribonuclease R — —
Erwinia tracheiphila HP pepo 2.2 0.71 IJEDHG_17990 ackA acetate kinase 0.61 IJEDHG_13230 rnr ribonuclease R — —
Pectobacterium carotovorum WPP14 0.70 HER17_RS07085 acetate kinase 0.62 HER17_RS03835 ribonuclease R — —
Rahnella sp. WP5 0.70 EX31_RS19480 acetate kinase 0.61 EX31_RS08785 ribonuclease R low > 89
Shewanella amazonensis SB2B 0.67 Sama_1495 acetate kinase (RefSeq) 0.54 Sama_3067 exoribonuclease II (RefSeq) low > 62
Shewanella sp. ANA-3 0.67 Shewana3_1552 acetate kinase (RefSeq) 0.56 Shewana3_0697 RNAse R (RefSeq) low > 73
Shewanella oneidensis MR-1 0.67 SO2915 ackA acetate kinase (NCBI ptt file) 0.55 SO3935 vacB ribonuclease R (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.66 Shew_2393 acetate kinase (RefSeq) 0.57 Shew_3289 ribonuclease R (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.51 MIT1002_01473 Acetate kinase 0.52 MIT1002_03606 Ribonuclease R low > 70
Pseudomonas sp. S08-1 0.45 OH686_06265 acetate kinase 0.46 OH686_15910 ribonuclease R low > 80
Pseudomonas aeruginosa MRSN321 0.44 PFGADD_04298 ackA Acetate kinase 0.47 PFGADD_05171 rnr ribonuclease R low > 99
Pseudomonas aeruginosa PA14 0.44 IKLFDK_03675 Acetate kinase 0.48 IKLFDK_28865 ribonuclease R 0.35 36
Pseudomonas aeruginosa PUPa3 0.44 NPBIFN_04357 ackA Acetate kinase 0.47 NPBIFN_05247 rnr ribonuclease R low > 101
Marinobacter adhaerens HP15 0.43 HP15_1499 acetate/propionate kinase 0.43 HP15_622 exoribonuclease R low > 73
Acinetobacter radioresistens SK82 0.43 MPMX26_00415 Acetate kinase 0.35 MPMX26_02684 Ribonuclease R low > 36
Acinetobacter baumannii LAC-4 0.40 RR41_RS16535 acetate kinase 0.34 RR41_RS02345 ribonuclease R low > 55
Variovorax sp. OAS795 0.33 ABID97_RS21845 acetate/propionate family kinase 0.35 ABID97_RS17200 ribonuclease R low > 91
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS03800 acetate kinase 0.42 RR42_RS13065 ribonuclease R low > 128
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS04300 acetate/propionate family kinase 0.41 ABZR86_RS08270 ribonuclease R low > 74
Rhodanobacter denitrificans MT42 0.31 LRK55_RS17635 acetate/propionate family kinase 0.40 LRK55_RS00235 ribonuclease R low > 63
Castellaniella sp019104865 MT123 0.31 ABCV34_RS03170 acetate/propionate family kinase 0.37 ABCV34_RS06625 ribonuclease R low > 48
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS17415 acetate/propionate family kinase 0.40 LRK54_RS00495 ribonuclease R low > 59
Dechlorosoma suillum PS 0.30 Dsui_3033 acetate kinase 0.43 Dsui_3128 ribonuclease R low > 51
Rhodanobacter sp000427505 FW510-R12 0.30 LRK53_RS11585 acetate/propionate family kinase 0.41 LRK53_RS09655 ribonuclease R low > 59
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS01305 acetate kinase 0.39 HSERO_RS09290 ribonuclease R low > 78
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_07530 ackA acetate kinase 0.41 OKGIIK_06755 rnr ribonuclease R low > 53
Variovorax sp. SCN45 0.28 GFF3161 Acetate kinase (EC 2.7.2.1) 0.34 GFF399 3'-to-5' exoribonuclease RNase R — —
Collimonas humicola GW821-FHT01A05 0.28 MPMX01_01799 Acetate kinase 0.38 MPMX01_02283 Ribonuclease R low > 87

Not shown: 17 genomes with orthologs for CSW01_05580 only; 36 genomes with orthologs for CSW01_13155 only