Conservation of cofitness between CSW01_12875 and CSW01_12900 in Vibrio cholerae E7946 ATCC 55056

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12875 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 1.0 CSW01_12900 DUF490 domain-containing protein 0.47 12
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_03802 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.30 OHPLBJKB_03812 Translocation and assembly module subunit TamB low > 74
Escherichia coli ECOR38 0.71 HEPCGN_10140 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.29 HEPCGN_10195 tamB autotransporter assembly complex protein TamB low > 88
Escherichia coli ECRC62 0.71 BNILDI_07315 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.30 BNILDI_07260 tamB autotransporter assembly complex protein TamB low > 75
Escherichia coli ECOR27 0.71 NOLOHH_04200 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.30 NOLOHH_04255 tamB autotransporter assembly complex protein TamB low > 76
Escherichia coli ECRC98 0.71 JDDGAC_15580 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.29 JDDGAC_15635 tamB autotransporter assembly complex protein TamB 0.66 16
Escherichia coli ECRC101 0.71 MCAODC_02445 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.29 MCAODC_02510 tamB autotransporter assembly complex protein TamB 0.47 88
Escherichia coli ECRC99 0.71 KEDOAH_16215 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.29 KEDOAH_16160 tamB autotransporter assembly complex protein TamB — —
Escherichia coli ECRC100 0.71 OKFHMN_11940 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.29 OKFHMN_11995 tamB autotransporter assembly complex protein TamB low > 79
Escherichia coli BL21 0.71 ECD_04101 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.30 ECD_04092 translocation and assembly module for autotransporter export, inner membrane subunit low > 61
Escherichia fergusonii Becca 0.71 EFB2_04300 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.30 EFB2_04308 Translocation and assembly module subunit TamB low > 86
Escherichia coli BW25113 0.71 b4233 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (NCBI) 0.30 b4221 ytfN hypothetical protein (NCBI) 0.22 44
Escherichia coli ECRC102 0.71 NIAGMN_09790 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.29 NIAGMN_09845 tamB autotransporter assembly complex protein TamB 0.69 23
Klebsiella pneumoniae MKP103 0.71 KDGMDA_11310 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.29 KDGMDA_11255 autotransporter assembly complex protein TamB low > 95
Escherichia coli Nissle 1917 0.71 ECOLIN_RS24560 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.30 ECOLIN_RS24515 autotransporter assembly complex protein TamB low > 55
Serratia liquefaciens MT49 0.70 IAI46_01800 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.30 IAI46_01775 translocation/assembly module TamB low > 86
Enterobacter sp. TBS_079 0.70 MPMX20_00515 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.29 MPMX20_00504 Translocation and assembly module subunit TamB 0.20 27
Klebsiella michiganensis M5al 0.70 BWI76_RS02820 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.29 BWI76_RS02780 translocation and assembly module TamB low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF881 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.30 GFF875 Uncharacterized protein YtfN low > 78
Enterobacter asburiae PDN3 0.69 EX28DRAFT_3420 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.29 EX28DRAFT_3407 Uncharacterized protein conserved in bacteria low > 76
Pantoea agglomerans CFBP13505 P0401 0.69 PagCFBP13505_RS11350 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.30 PagCFBP13505_RS11315 translocation/assembly module TamB 0.56 57
Dickeya dadantii 3937 0.69 DDA3937_RS18580 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.29 DDA3937_RS17155 translocation/assembly module TamB low > 74
Pantoea sp. MT58 0.69 IAI47_02755 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.30 IAI47_02720 translocation/assembly module TamB low > 76
Pectobacterium carotovorum WPP14 0.69 HER17_RS02615 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.28 HER17_RS03985 translocation/assembly module TamB low > 75
Erwinia amylovora T8 0.69 OLJFJH_02365 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.31 OLJFJH_02390 translocation and assembly module TamB low > 58
Dickeya dianthicola 67-19 0.68 HGI48_RS18515 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.28 HGI48_RS17210 translocation/assembly module TamB low > 71
Dickeya dianthicola ME23 0.68 DZA65_RS19650 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.29 DZA65_RS18290 translocation/assembly module TamB low > 75
Erwinia tracheiphila HP pepo 2.2 0.67 IJEDHG_06780 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.30 IJEDHG_06805 translocation and assembly module TamB — —
Erwinia tracheiphila SCR3 0.67 LU632_RS02135 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.30 LU632_RS02110 translocation/assembly module TamB low > 74
Shewanella amazonensis SB2B 0.67 Sama_0769 UDP-N-acetylmuramate (RefSeq) 0.15 Sama_1615 hypothetical protein (RefSeq) low > 62
Rahnella sp. WP5 0.67 EX31_RS08665 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.31 EX31_RS08690 translocation/assembly module TamB 0.70 1
Shewanella loihica PV-4 0.65 Shew_3144 UDP-N-acetylmuramate (RefSeq) 0.16 Shew_2173 hypothetical protein (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.65 MIT1002_00168 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.14 MIT1002_04049 Autotransporter assembly factor TamB low > 70
Shewanella oneidensis MR-1 0.64 SO3805 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (NCBI ptt file) 0.14 SO2113 conserved hypothetical protein (NCBI ptt file) low > 76
Pseudomonas sp. BP01 0.64 JOY50_RS23075 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.14 JOY50_RS05885 translocation/assembly module TamB domain-containing protein low > 84
Pseudomonas lactucae CFBP13502 0.63 GEMAOFIL_05114 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.13 GEMAOFIL_03701 Translocation and assembly module subunit TamB low > 93
Pseudomonas putida KT2440 0.63 PP_0547 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.14 PP_2893 conserved exported protein of unknown function low > 96
Pseudomonas fluorescens SBW25 0.63 PFLU_RS26735 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.13 PFLU_RS18915 translocation/assembly module TamB 0.77 42
Pseudomonas simiae WCS417 0.63 PS417_24800 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.13 PS417_16965 hypothetical protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS26735 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.13 PFLU_RS18915 translocation/assembly module TamB 0.29 103
Pseudomonas segetis P6 0.63 MPMX49_01032 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.15 MPMX49_02381 Translocation and assembly module subunit TamB low > 75
Pseudomonas sp. SVBP6 0.63 COO64_RS15685 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.14 COO64_RS24390 translocation/assembly module TamB domain-containing protein low > 93
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_0630 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.14 Psyr_2479 Protein of unknown function DUF490 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_0630 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.14 Psyr_2479 Protein of unknown function DUF490 low > 86
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_06550 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.12 AO353_27860 hypothetical protein low > 101
Pseudomonas stutzeri RCH2 0.62 Psest_0673 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.14 Psest_2133 Uncharacterized protein conserved in bacteria low > 67
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_1344 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.13 PfGW456L13_2602 putative exported protein low > 87
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_2676 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.13 Pf1N1B4_3998 putative exported protein — —
Pseudomonas sp. DMC3 0.62 GFF3860 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-m eso-2,6-diaminoheptandioate ligase 0.13 GFF1484 Translocation and assembly module subunit TamB low > 89
Marinobacter adhaerens HP15 0.57 HP15_616 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.14 HP15_2340 protein containing DUF490 low > 73
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS17365 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.09 ABZR86_RS19700 translocation/assembly module TamB domain-containing protein low > 74
Rhodanobacter denitrificans MT42 0.54 LRK55_RS06355 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.09 LRK55_RS12400 translocation/assembly module TamB domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS06610 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.08 LRK54_RS12660 translocation/assembly module TamB domain-containing protein low > 59

Not shown: 35 genomes with orthologs for CSW01_12875 only; 0 genomes with orthologs for CSW01_12900 only