Conservation of cofitness between CSW01_05005 and CSW01_12330 in Vibrio cholerae E7946 ATCC 55056

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05005 epimerase 1.0 CSW01_12330 ADP-ribose diphosphatase 0.63 12
Serratia liquefaciens MT49 0.52 IAI46_17780 TIGR01777 family protein 0.58 IAI46_21940 ADP-ribose diphosphatase low > 87
Dickeya dianthicola ME23 0.50 DZA65_RS15305 TIGR01777 family protein 0.54 DZA65_RS01715 ADP-ribose diphosphatase low > 75
Dickeya dianthicola 67-19 0.50 HGI48_RS14375 TIGR01777 family protein 0.54 HGI48_RS01640 ADP-ribose diphosphatase low > 71
Dickeya dadantii 3937 0.50 DDA3937_RS14405 TIGR01777 family protein 0.55 DDA3937_RS01745 ADP-ribose diphosphatase low > 74
Pectobacterium carotovorum WPP14 0.49 HER17_RS07050 TIGR01777 family oxidoreductase 0.52 HER17_RS19820 ADP-ribose diphosphatase low > 75
Pantoea agglomerans CFBP13505 P0401 0.48 PagCFBP13516_RS06515 TIGR01777 family oxidoreductase 0.59 PagCFBP13516_RS03380 nudF ADP-ribose diphosphatase low > 80
Alteromonas macleodii MIT1002 0.48 MIT1002_01417 Epimerase family protein 0.50 MIT1002_00671 ADP-ribose pyrophosphatase low > 70
Escherichia coli ECOR38 0.47 HEPCGN_21960 yfcH Epimerase family protein YfcH 0.56 HEPCGN_17685 nudF ADP-ribose diphosphatase low > 88
Pantoea sp. MT58 0.47 IAI47_06305 TIGR01777 family protein 0.59 IAI47_03140 ADP-ribose diphosphatase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF1914 Cell division inhibitor 0.56 GFF3148 ADP-ribose pyrophosphatase (EC 3.6.1.13) low > 78
Escherichia coli BW25113 0.47 b2304 yfcH conserved protein with NAD(P)-binding Rossmann-fold domain (NCBI) 0.56 b3034 nudF ADP-ribose pyrophosphatase (NCBI) low > 76
Escherichia coli ECRC99 0.47 KEDOAH_05440 yfcH Epimerase family protein YfcH 0.56 KEDOAH_09335 nudF ADP-ribose diphosphatase — —
Escherichia coli ECRC100 0.47 OKFHMN_22755 yfcH Epimerase family protein YfcH 0.56 OKFHMN_18810 nudF ADP-ribose diphosphatase low > 79
Escherichia coli ECRC102 0.47 NIAGMN_20525 yfcH Epimerase family protein YfcH 0.56 NIAGMN_16575 nudF ADP-ribose diphosphatase low > 80
Escherichia coli ECRC62 0.47 BNILDI_13295 yfcH Epimerase family protein YfcH 0.56 BNILDI_00900 nudF ADP-ribose diphosphatase low > 75
Escherichia coli BL21 0.47 ECD_02229 putative NAD-dependent nucleotide-sugar epimerase 0.56 ECD_02906 ADP-ribose pyrophosphatase low > 61
Escherichia fergusonii Becca 0.47 EFB2_01554 Epimerase family protein 0.56 EFB2_00774 ADP-ribose pyrophosphatase low > 86
Escherichia coli ECRC98 0.47 JDDGAC_26720 yfcH Epimerase family protein YfcH 0.56 JDDGAC_22445 nudF ADP-ribose diphosphatase low > 87
Enterobacter sp. TBS_079 0.47 MPMX20_03239 Epimerase family protein 0.58 MPMX20_03881 ADP-ribose pyrophosphatase low > 85
Escherichia coli ECOR27 0.47 NOLOHH_14375 yfcH Epimerase family protein YfcH 0.56 NOLOHH_10615 nudF ADP-ribose diphosphatase low > 75
Escherichia coli ECRC101 0.47 MCAODC_13795 yfcH Epimerase family protein YfcH 0.56 MCAODC_09325 nudF ADP-ribose diphosphatase low > 87
Enterobacter asburiae PDN3 0.47 EX28DRAFT_0300 TIGR01777 family protein 0.58 EX28DRAFT_3072 nudix-type nucleoside diphosphatase, YffH/AdpP family low > 76
Escherichia coli Nissle 1917 0.47 ECOLIN_RS13370 TIGR01777 family oxidoreductase 0.56 ECOLIN_RS17510 ADP-ribose diphosphatase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_01401 Epimerase family protein 0.56 OHPLBJKB_00669 ADP-ribose pyrophosphatase low > 74
Shewanella amazonensis SB2B 0.46 Sama_1488 hypothetical protein (RefSeq) 0.56 Sama_3047 ADP-ribose diphosphatase (RefSeq) low > 62
Erwinia tracheiphila SCR3 0.46 LU632_RS07880 TIGR01777 family oxidoreductase 0.58 LU632_RS20630 nudF ADP-ribose diphosphatase low > 73
Klebsiella michiganensis M5al 0.46 BWI76_RS20300 epimerase 0.60 BWI76_RS24395 ADP-ribose diphosphatase — —
Rahnella sp. WP5 0.46 EX31_RS19530 TIGR01777 family protein 0.55 EX31_RS08095 ADP-ribose diphosphatase 0.33 15
Shewanella loihica PV-4 0.46 Shew_2400 hypothetical protein (RefSeq) 0.55 Shew_0545 ADP-ribose diphosphatase (RefSeq) low > 60
Klebsiella pneumoniae MKP103 0.46 KDGMDA_27145 epimerase 0.58 KDGMDA_05220 ADP-ribose diphosphatase low > 94
Klebsiella pneumoniae MRSN742743 0.46 GJGHJB_01473 yfcH Cell division inhibitor 0.58 GJGHJB_00670 nudF ADP-ribose diphosphatase low > 83
Erwinia amylovora T8 0.45 OLJFJH_11310 epimerase 0.57 OLJFJH_07680 ADP-ribose diphosphatase low > 58
Shewanella sp. ANA-3 0.44 Shewana3_1542 hypothetical protein (RefSeq) 0.50 Shewana3_0726 nucleoside diphosphate pyrophosphatase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.44 SO2922 conserved hypothetical protein (NCBI ptt file) 0.49 SO3903 MutT/nudix family protein (NCBI ptt file) low > 76
Pseudomonas segetis P6 0.42 ACVTMO_RS06705 TIGR01777 family oxidoreductase 0.46 ACVTMO_RS20740 NUDIX domain-containing protein low > 75
Marinobacter adhaerens HP15 0.41 HP15_1503 nucleoside-diphosphate sugar epimerase 0.45 HP15_454 nucleoside diphosphate pyrophosphatase low > 73
Pseudomonas sp. SVBP6 0.40 COO64_RS03280 TIGR01777 family oxidoreductase 0.44 COO64_RS17770 NUDIX domain-containing protein low > 91
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_0966 Conserved hypothetical protein YfcH 0.45 Psyr_0547 Conserved hypothetical protein 52 low > 86
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_0966 Conserved hypothetical protein YfcH 0.45 Psyr_0547 Conserved hypothetical protein 52 low > 86
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_1338 TIGR01777 family protein 0.42 B158DRAFT_0975 nudix-type nucleoside diphosphatase, YffH/AdpP family low > 40
Pseudomonas sp. S08-1 0.38 OH686_17890 Cell division inhibitor (YfcH in EC), contains epimerase/dehydratase and DUF1731 domains 0.48 OH686_15835 ADP-ribose pyrophosphatase low > 80
Pseudomonas orientalis W4I3 0.38 QF045_RS06670 TIGR01777 family oxidoreductase 0.46 QF045_RS05430 NUDIX domain-containing protein low > 93
Pseudomonas protegens RBAN4 0.37 FABNJH_25880 TIGR01777 family protein 0.48 FABNJH_02805 nudF ADP-ribose pyrophosphatase — —
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS03740 TIGR01777 family protein 0.45 PFLU_RS02445 NUDIX domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.37 PFLU_RS03740 TIGR01777 family protein 0.45 PFLU_RS02445 NUDIX domain-containing protein low > 109
Pseudomonas aeruginosa PUPa3 0.37 NPBIFN_04931 TIGR01777 family protein 0.45 NPBIFN_05283 ADP-ribose pyrophosphatase low > 101
Pseudomonas aeruginosa MRSN321 0.37 PFGADD_04870 TIGR01777 family protein 0.45 PFGADD_05207 ADP-ribose pyrophosphatase low > 99
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_14840 NAD-dependent dehydratase 0.44 AO353_13025 ADP-ribose pyrophosphatase low > 101
Pseudomonas lactucae CFBP13502 0.36 GEMAOFIL_00944 Epimerase family protein 0.47 GEMAOFIL_00711 ADP-ribose pyrophosphatase low > 96
Pseudomonas aeruginosa PA14 0.36 IKLFDK_00215 epimerase 0.45 IKLFDK_28685 ADP-ribose diphosphatase low > 98
Pseudomonas simiae WCS417 0.35 PS417_03690 NAD-dependent dehydratase 0.45 PS417_02370 ADP-ribose pyrophosphatase low > 88
Pseudomonas stutzeri RCH2 0.35 Psest_2394 TIGR01777 family protein 0.46 Psest_0479 nudix-type nucleoside diphosphatase, YffH/AdpP family low > 67
Pseudomonas sp. RS175 0.35 PFR28_03644 Epimerase family protein 0.45 PFR28_05094 ADP-ribose pyrophosphatase low > 88
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_16550 NAD-dependent dehydratase 0.46 AO356_08795 ADP-ribose pyrophosphatase low > 104
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_5232 Cell division inhibitor 0.45 Pf6N2E2_3641 ADP-ribose pyrophosphatase (EC 3.6.1.13) low > 103
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1594 Cell division inhibitor 0.45 PfGW456L13_182 ADP-ribose pyrophosphatase (EC 3.6.1.13) low > 87
Pseudomonas sp. DMC3 0.33 GFF4474 Epimerase family protein 0.44 GFF3186 ADP-ribose pyrophosphatase low > 89
Pseudomonas putida KT2440 0.33 PP_0743 conserved protein with NAD(P)-binding Rossmann-fold domain 0.46 PP_4919 ADP-ribose/sugar pyrophosphatase low > 96
Pseudomonas sp. BP01 0.33 JOY50_RS19540 TIGR01777 family oxidoreductase 0.46 JOY50_RS17105 NUDIX domain-containing protein low > 84
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2931 Cell division inhibitor 0.44 Pf1N1B4_1444 ADP-ribose pyrophosphatase (EC 3.6.1.13) low > 87
Acinetobacter baumannii LAC-4 0.29 RR41_RS14765 TIGR01777 family oxidoreductase 0.40 RR41_RS17720 NUDIX domain-containing protein low > 55
Acinetobacter radioresistens SK82 0.29 MPMX26_02400 Epimerase family protein 0.35 MPMX26_00179 ADP-ribose pyrophosphatase low > 36

Not shown: 11 genomes with orthologs for CSW01_05005 only; 5 genomes with orthologs for CSW01_12330 only