Conservation of cofitness between CSW01_10660 and CSW01_10350 in Vibrio cholerae E7946 ATCC 55056

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10660 sigma-54-dependent Fis family transcriptional regulator 1.0 CSW01_10350 flagellar biosynthesis protein FlhA 0.96 5
Alteromonas macleodii MIT1002 0.61 MIT1002_01083 Transcriptional regulatory protein ZraR 0.68 MIT1002_01100 Flagellar biosynthesis protein FlhA low > 70
Shewanella sp. ANA-3 0.58 Shewana3_1340 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) 0.71 Shewana3_1356 flhA flagellar biosynthesis protein FlhA (RefSeq) 0.54 34
Shewanella oneidensis MR-1 0.58 SO3230 flrC flagellar regulatory protein C (NCBI ptt file) 0.68 SO3213 flhA flagellar biosynthesis protein FlhA (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.58 Sama_2299 response regulator receiver protein (RefSeq) 0.71 Sama_2283 flhA flagellar biosynthesis protein FlhA (RefSeq) 0.39 16
Shewanella loihica PV-4 0.58 Shew_1364 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) 0.72 Shew_1380 flhA flagellar biosynthesis protein FlhA (RefSeq) 0.95 16
Pseudomonas segetis P6 0.51 MPMX49_03148 Regulatory protein AtoC 0.60 MPMX49_03130 Flagellar biosynthesis protein FlhA 0.97 6
Marinobacter adhaerens HP15 0.51 HP15_2328 two component, sigma54 specific, transcriptional regulator, Fis family 0.57 HP15_2305 flagellar biosynthesis protein A 0.92 17
Pseudomonas sp. S08-1 0.51 OH686_02845 Flagellar two-component response regulator FleR 0.61 OH686_02745 flagellar biosynthesis protein FlhA 0.97 8
Pseudomonas sp. RS175 0.50 PFR28_00830 Regulatory protein AtoC 0.61 PFR28_00849 Flagellar biosynthesis protein FlhA 0.63 21
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_2595 Flagellar regulatory protein FleQ 0.60 Pf6N2E2_2576 Flagellar biosynthesis protein FlhA 0.66 10
Pseudomonas stutzeri RCH2 0.50 Psest_1767 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 0.62 Psest_1737 flagellar biosynthesis protein FlhA low > 67
Pseudomonas sp. DMC3 0.50 GFF2447 Regulatory protein AtoC 0.60 GFF2469 Flagellar biosynthesis protein FlhA low > 89
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_18670 Fis family transcriptional regulator 0.60 AO353_18770 flagellar biosynthesis protein FlhA 0.69 28
Pseudomonas fluorescens SBW25 0.49 PFLU_RS21785 sigma-54-dependent Fis family transcriptional regulator 0.59 PFLU_RS21675 flagellar biosynthesis protein FlhA 0.84 11
Pseudomonas fluorescens SBW25-INTG 0.49 PFLU_RS21785 sigma-54-dependent Fis family transcriptional regulator 0.59 PFLU_RS21675 flagellar biosynthesis protein FlhA 0.81 4
Pseudomonas lactucae CFBP13502 0.49 GEMAOFIL_04161 Regulatory protein AtoC 0.58 GEMAOFIL_04141 Flagellar biosynthesis protein FlhA 0.84 12
Pseudomonas orientalis W4I3 0.49 QF045_RS21945 sigma-54 dependent transcriptional regulator 0.58 QF045_RS21850 flagellar biosynthesis protein FlhA low > 93
Pseudomonas sp. BP01 0.49 JOY50_RS00695 sigma-54 dependent transcriptional regulator 0.60 JOY50_RS00600 flhA flagellar biosynthesis protein FlhA low > 84
Pseudomonas aeruginosa PUPa3 0.49 DQ20_RS45880 fleR;inference=COORDINATES sigma-54-dependent response regulator transcription factor FleR 0.62 DQ20_RS47140 flhA;go_component=bacterial-type flagellar biosynthesis protein FlhA 0.65 32
Pseudomonas aeruginosa MRSN321 0.49 DY961_RS06955 fleR;inference=COORDINATES sigma-54-dependent response regulator transcription factor FleR 0.62 DY961_RS05650 flhA;go_component=bacterial-type flagellar biosynthesis protein FlhA 0.48 52
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_4355 Flagellar regulatory protein FleQ 0.60 PfGW456L13_4334 Flagellar biosynthesis protein FlhA low > 87
Pseudomonas aeruginosa PA14 0.49 IKLFDK_05055 sigma-54-dependent response regulator transcription factor FleR 0.62 IKLFDK_06905 flagellar biosynthesis protein FlhA 0.93 5
Pseudomonas simiae WCS417 0.49 PS417_19815 Fis family transcriptional regulator 0.58 PS417_19710 flagellar biosynthesis protein FlhA — —
Pseudomonas putida KT2440 0.48 PP_4371 two component system AtoC DNA-binding transcriptional activator 0.62 PP_4344 flagellar export pore protein 0.65 12
Pseudomonas sp. SVBP6 0.48 COO64_RS21290 sigma-54 dependent transcriptional regulator 0.61 COO64_RS25610 flhA flagellar biosynthesis protein FlhA 0.55 20
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_03845 Fis family transcriptional regulator 0.61 AO356_03745 flagellar biosynthesis protein FlhA 0.73 18
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_3459 Helix-turn-helix, Fis-type 0.60 Psyr_3440 Flagellar biosynthesis protein FlhA low > 86
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_3459 Helix-turn-helix, Fis-type 0.60 Psyr_3440 Flagellar biosynthesis protein FlhA low > 86
Dechlorosoma suillum PS 0.45 Dsui_1758 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains 0.55 Dsui_1723 flagellar biosynthesis protein FlhA 0.82 7
Magnetospirillum magneticum AMB-1 0.32 AMB_RS02570 sigma-54-dependent Fis family transcriptional regulator 0.36 AMB_RS02565 flagellar biosynthesis protein FlhA low > 64
Rhodospirillum rubrum S1H 0.31 Rru_A0540 Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) 0.38 Rru_A0539 Flagellar biosynthesis protein FlhA (NCBI) low > 58
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF2455 Putative sensory histidine kinase YfhA 0.49 GFF1660 Flagellar biosynthesis protein FlhA low > 78
Caulobacter crescentus NA1000 0.31 CCNA_00954 AAA-family response regulator flbD 0.32 CCNA_00956 flagellar biosynthesis protein FlhA 0.86 16
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_00954 AAA-family response regulator flbD 0.32 CCNA_00956 flagellar biosynthesis protein FlhA low > 67
Serratia liquefaciens MT49 0.31 IAI46_19460 two-component system response regulator GlrR 0.51 IAI46_15995 flagellar biosynthesis protein FlhA low > 87
Enterobacter sp. TBS_079 0.30 MPMX20_03423 Transcriptional regulatory protein QseF 0.48 MPMX20_02783 Flagellar biosynthesis protein FlhA low > 85
Escherichia coli ECRC62 0.30 BNILDI_11970 qseF two-component system response regulator QseF/GlrR 0.50 BNILDI_15400 flhA flagellar biosynthesis protein FlhA low > 75
Enterobacter asburiae PDN3 0.30 EX28DRAFT_0096 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 0.48 EX28DRAFT_0681 flagellar biosynthesis protein FlhA low > 76
Escherichia coli ECRC102 0.30 NIAGMN_19265 qseF two-component system response regulator QseF/GlrR 0.49 NIAGMN_01890 flhA flagellar biosynthesis protein FlhA low > 80
Escherichia coli ECRC99 0.30 KEDOAH_06725 qseF two-component system response regulator QseF/GlrR 0.49 KEDOAH_01935 flhA flagellar biosynthesis protein FlhA — —
Escherichia coli ECRC101 0.30 MCAODC_12025 qseF two-component system response regulator QseF/GlrR 0.49 MCAODC_19235 flhA flagellar biosynthesis protein FlhA low > 87
Escherichia coli ECRC100 0.30 OKFHMN_21495 qseF two-component system response regulator QseF/GlrR 0.49 OKFHMN_26170 flhA flagellar biosynthesis protein FlhA low > 79
Escherichia coli ECRC98 0.30 JDDGAC_25160 qseF two-component system response regulator QseF/GlrR 0.49 JDDGAC_00745 flhA flagellar biosynthesis protein FlhA low > 87
Azospirillum brasilense Sp245 0.30 AZOBR_RS20165 ATPase AAA 0.35 AZOBR_RS29955 flagellar biosynthesis protein FlhA low > 97
Bosea sp. OAE506 0.30 ABIE41_RS10895 sigma-54 dependent transcriptional regulator 0.36 ABIE41_RS10915 flagellar biosynthesis protein FlhA 0.61 2
Rhodopseudomonas palustris CGA009 0.30 TX73_006510 sigma-54 dependent transcriptional regulator 0.35 TX73_008415 flagellar biosynthesis protein FlhA 0.97 2
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS09765 sigma-54 dependent transcriptional regulator 0.35 A4249_RS09755 flagellar biosynthesis protein FlhA low > 48

Not shown: 2 genomes with orthologs for CSW01_10660 only; 52 genomes with orthologs for CSW01_10350 only