Conservation of cofitness between CSW01_06745 and CSW01_08705 in Vibrio cholerae E7946 ATCC 55056

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06745 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 1.0 CSW01_08705 3-phosphoshikimate 1-carboxyvinyltransferase 0.48 6
Shewanella loihica PV-4 0.80 Shew_1822 aconitate hydratase (RefSeq) 0.71 Shew_1952 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.79 MIT1002_03131 Aconitate hydratase 1 0.68 MIT1002_02191 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas orientalis W4I3 0.79 QF045_RS22895 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.25 QF045_RS17005 3-phosphoshikimate 1-carboxyvinyltransferase low > 93
Pseudomonas lactucae CFBP13502 0.79 GEMAOFIL_04359 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) 0.25 GEMAOFIL_02820 3-phosphoshikimate 1-carboxyvinyltransferase low > 96
Ralstonia solanacearum GMI1000 0.78 RS_RS17730 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.54 RS_RS04510 3-phosphoshikimate 1-carboxyvinyltransferase low > 80
Shewanella sp. ANA-3 0.78 Shewana3_3827 aconitate hydratase (RefSeq) 0.73 Shewana3_1975 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) low > 73
Paraburkholderia bryophila 376MFSha3.1 0.78 H281DRAFT_02981 aconitase /2-methylcitrate dehydratase (trans-methylaconitate-forming) 0.60 H281DRAFT_03922 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS22680 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.25 PFLU_RS13540 3-phosphoshikimate 1-carboxyvinyltransferase low > 109
Pseudomonas fluorescens SBW25 0.78 PFLU_RS22680 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.25 PFLU_RS13540 3-phosphoshikimate 1-carboxyvinyltransferase low > 109
Paraburkholderia graminis OAS925 0.78 ABIE53_005043 iron-sulfur-dependent 2-methylisocitrate dehydratase 0.58 ABIE53_003154 3-phosphoshikimate 1-carboxyvinyltransferase — —
Herbaspirillum seropedicae SmR1 0.78 HSERO_RS11425 aconitate hydratase 0.53 HSERO_RS18420 3-phosphoshikimate 1-carboxyvinyltransferase — —
Shewanella oneidensis MR-1 0.78 SO0343 acnA aconitate hydratase 1 (NCBI ptt file) 0.72 SO2404 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI ptt file) low > 76
Cupriavidus basilensis FW507-4G11 0.78 RR42_RS11270 aconitate hydratase 0.53 RR42_RS04475 3-phosphoshikimate 1-carboxyvinyltransferase low > 128
Paraburkholderia sabiae LMG 24235 0.78 QEN71_RS31060 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.58 QEN71_RS04085 3-phosphoshikimate 1-carboxyvinyltransferase low > 153
Ralstonia sp. UNC404CL21Col 0.78 ABZR87_RS16735 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.54 ABZR87_RS09465 3-phosphoshikimate 1-carboxyvinyltransferase low > 80
Ralstonia solanacearum PSI07 0.78 RPSI07_RS00390 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.55 RPSI07_RS19695 3-phosphoshikimate 1-carboxyvinyltransferase — —
Burkholderia phytofirmans PsJN 0.78 BPHYT_RS30145 aconitate hydratase 0.59 BPHYT_RS14895 3-phosphoshikimate 1-carboxyvinyltransferase low > 109
Ralstonia solanacearum IBSBF1503 0.77 RALBFv3_RS22830 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.54 RALBFv3_RS13775 3-phosphoshikimate 1-carboxyvinyltransferase low > 76
Shewanella amazonensis SB2B 0.77 Sama_3296 aconitate hydratase (RefSeq) 0.72 Sama_1734 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) 0.43 11
Ralstonia solanacearum UW163 0.77 UW163_RS23450 Fe/S-dependent 2-methylisocitrate dehydratase AcnD 0.54 UW163_RS16035 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_2087 aconitase / 2-methylcitrate dehydratase (trans-methylaconitate-forming) 0.29 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_2087 aconitase / 2-methylcitrate dehydratase (trans-methylaconitate-forming) 0.29 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF2709 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) 0.74 GFF3665 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) low > 78
Escherichia coli ECOR38 0.41 HEPCGN_25625 acnA aconitate hydratase AcnA 0.73 HEPCGN_23035 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 88
Enterobacter sp. TBS_079 0.41 MPMX20_02499 Aconitate hydratase A 0.74 MPMX20_01567 3-phosphoshikimate 1-carboxyvinyltransferase low > 85
Enterobacter asburiae PDN3 0.41 EX28DRAFT_0949 aconitate hydratase 1 0.74 EX28DRAFT_2027 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) low > 76
Escherichia coli ECRC101 0.41 MCAODC_15690 acnA aconitate hydratase AcnA 0.74 MCAODC_24875 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 87
Escherichia coli ECRC98 0.41 JDDGAC_05120 acnA aconitate hydratase AcnA 0.74 JDDGAC_09095 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 87
Escherichia coli ECRC62 0.41 BNILDI_18390 acnA aconitate hydratase AcnA 0.74 BNILDI_20300 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 75
Escherichia coli ECRC102 0.41 NIAGMN_26745 acnA aconitate hydratase AcnA 0.74 NIAGMN_03205 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 80
Escherichia coli ECRC99 0.41 KEDOAH_26190 acnA aconitate hydratase AcnA 0.74 KEDOAH_22250 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli ECRC100 0.41 OKFHMN_02575 acnA aconitate hydratase AcnA 0.74 OKFHMN_05485 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 79
Escherichia coli ECOR27 0.41 NOLOHH_20240 acnA aconitate hydratase AcnA 0.74 NOLOHH_22045 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 75
Serratia liquefaciens MT49 0.41 IAI46_13950 aconitate hydratase AcnA 0.73 IAI46_08640 3-phosphoshikimate 1-carboxyvinyltransferase low > 87
Escherichia coli Nissle 1917 0.41 ECOLIN_RS07705 aconitate hydratase AcnA 0.74 ECOLIN_RS04810 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia fergusonii Becca 0.41 EFB2_02649 Aconitate hydratase A 0.74 EFB2_03156 3-phosphoshikimate 1-carboxyvinyltransferase low > 86
Escherichia coli BW25113 0.41 b1276 acnA aconitate hydratase (NCBI) 0.74 b0908 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) low > 76
Rahnella sp. WP5 0.41 EX31_RS09885 aconitate hydratase AcnA 0.77 EX31_RS18250 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pantoea agglomerans CFBP13505 P0401 0.41 PagCFBP13516_RS09380 acnA aconitate hydratase AcnA 0.74 PagCFBP13516_RS12945 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_02406 Aconitate hydratase A 0.74 OHPLBJKB_02760 3-phosphoshikimate 1-carboxyvinyltransferase low > 74
Escherichia coli BL21 0.41 ECD_01253 aconitate hydratase 1; aconitase A 0.74 ECD_00912 5-enolpyruvylshikimate-3-phosphate synthetase low > 61
Pantoea sp. MT58 0.41 IAI47_09250 aconitate hydratase AcnA 0.72 IAI47_12860 3-phosphoshikimate 1-carboxyvinyltransferase — —
Klebsiella pneumoniae MRSN742743 0.40 KFA93_RS20120 acnA;go_function=aconitate aconitate hydratase AcnA 0.74 KFA93_RS00915 aroA;go_function=3-phosphoshikimate 3-phosphoshikimate 1-carboxyvinyltransferase low > 82
Klebsiella pneumoniae MKP103 0.40 KDGMDA_19630 aconitate hydratase AcnA 0.74 KDGMDA_17970 3-phosphoshikimate 1-carboxyvinyltransferase low > 94
Erwinia amylovora T8 0.40 OLJFJH_13545 aconitate hydratase AcnA 0.72 OLJFJH_16135 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dickeya dadantii 3937 0.40 DDA3937_RS12555 aconitate hydratase AcnA 0.74 DDA3937_RS09675 3-phosphoshikimate 1-carboxyvinyltransferase — —
Klebsiella michiganensis M5al 0.40 BWI76_RS11940 aconitate hydratase 1 0.73 BWI76_RS09760 3-phosphoshikimate 1-carboxyvinyltransferase low > 92
Dickeya dianthicola 67-19 0.40 HGI48_RS12610 aconitate hydratase AcnA 0.74 HGI48_RS09685 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dickeya dianthicola ME23 0.39 DZA65_RS13065 aconitate hydratase AcnA 0.74 DZA65_RS09995 3-phosphoshikimate 1-carboxyvinyltransferase — —
Agrobacterium fabrum C58 0.39 Atu2685 aconitate hydratase 0.26 Atu0642 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhizobium sp. OAE497 0.39 ABIE40_RS18275 aconitate hydratase AcnA 0.28 ABIE40_RS05420 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pectobacterium carotovorum WPP14 0.38 HER17_RS09315 aconitate hydratase AcnA 0.72 HER17_RS12285 3-phosphoshikimate 1-carboxyvinyltransferase low > 75
Echinicola vietnamensis KMM 6221, DSM 17526 0.38 Echvi_4039 aconitate hydratase 1 0.27 Echvi_0122 5-enolpyruvylshikimate-3-phosphate synthase — —

Not shown: 52 genomes with orthologs for CSW01_06745 only; 14 genomes with orthologs for CSW01_08705 only