Conservation of cofitness between CSW01_11925 and CSW01_08330 in Vibrio cholerae E7946 ATCC 55056

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11925 TatD family deoxyribonuclease 1.0 CSW01_08330 hypothetical protein 0.62 13
Enterobacter sp. TBS_079 0.42 MPMX20_00677 putative metal-dependent hydrolase YjjV 0.15 MPMX20_01423 hypothetical protein low > 85
Escherichia coli ECRC62 0.42 BNILDI_08020 tatD metal-dependent hydrolase 0.16 BNILDI_20935 hlyD secretion protein HlyD low > 75
Enterobacter asburiae PDN3 0.42 EX28DRAFT_3587 Mg-dependent DNase 0.15 EX28DRAFT_2196 Multidrug resistance efflux pump — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF1040 Putative deoxyribonuclease YjjV 0.16 GFF694 Predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_03683 putative metal-dependent hydrolase YjjV 0.16 OHPLBJKB_02918 hypothetical protein low > 74
Escherichia fergusonii Becca 0.41 EFB2_04068 putative metal-dependent hydrolase YjjV 0.15 EFB2_03310 hypothetical protein low > 86
Escherichia coli ECOR38 0.41 HEPCGN_09265 tatD metal-dependent hydrolase 0.16 HEPCGN_01740 hlyD secretion protein HlyD low > 88
Escherichia coli BL21 0.41 ECD_04254 putative DNase 0.16 ECD_00762 putative membrane fusion protein (MFP) component of efflux pump, membrane anchor low > 61
Escherichia coli BW25113 0.41 b4378 yjjV predicted DNase (NCBI) 0.16 b0795 ybhG hypothetical protein (NCBI) low > 76
Klebsiella michiganensis M5al 0.41 BWI76_RS04120 metal-dependent hydrolase 0.14 BWI76_RS08880 secretion protein HlyD low > 92
Dickeya dadantii 3937 0.41 DDA3937_RS02460 TatD family hydrolase 0.13 DDA3937_RS08640 secretion protein HlyD low > 74
Escherichia coli ECRC99 0.41 KEDOAH_16885 yjjV metal-dependent hydrolase 0.16 KEDOAH_21610 hlyD secretion protein HlyD — —
Escherichia coli Nissle 1917 0.41 ECOLIN_RS25130 metal-dependent hydrolase 0.15 ECOLIN_RS04235 secretion protein HlyD low > 55
Escherichia coli ECRC98 0.41 JDDGAC_14855 yjjV metal-dependent hydrolase 0.16 JDDGAC_09935 hlyD secretion protein HlyD low > 87
Escherichia coli ECRC101 0.41 MCAODC_01775 yjjV metal-dependent hydrolase 0.16 MCAODC_25515 hlyD secretion protein HlyD low > 87
Escherichia coli ECRC102 0.41 NIAGMN_09110 yjjV metal-dependent hydrolase 0.16 NIAGMN_04345 hlyD secretion protein HlyD low > 80
Escherichia coli ECOR27 0.41 NOLOHH_03580 yjjV metal-dependent hydrolase 0.16 NOLOHH_22655 hlyD secretion protein HlyD low > 76
Escherichia coli ECRC100 0.41 OKFHMN_11260 yjjV metal-dependent hydrolase 0.16 OKFHMN_06300 hlyD secretion protein HlyD low > 79
Klebsiella pneumoniae MKP103 0.41 KDGMDA_12390 metal-dependent hydrolase 0.14 KDGMDA_08070 secretion protein HlyD low > 95
Dickeya dianthicola ME23 0.40 DZA65_RS02520 metal-dependent hydrolase 0.14 DZA65_RS09070 secretion protein HlyD low > 75
Dickeya dianthicola 67-19 0.40 HGI48_RS02415 TatD family hydrolase 0.11 HGI48_RS08780 secretion protein HlyD low > 71
Serratia liquefaciens MT49 0.38 IAI46_02900 TatD family hydrolase 0.14 IAI46_06610 secretion protein HlyD low > 87
Erwinia tracheiphila SCR3 0.38 LU632_RS02510 TatD family hydrolase 0.13 LU632_RS22040 HlyD family efflux transporter periplasmic adaptor subunit low > 73
Erwinia tracheiphila HP pepo 2.2 0.37 IJEDHG_06420 metal-dependent hydrolase 0.13 IJEDHG_07735 HlyD family secretion protein low > 61
Rahnella sp. WP5 0.36 EX31_RS04070 deoxyribonuclease YjjV 0.13 EX31_RS00880 secretion protein HlyD low > 89
Marinobacter adhaerens HP15 0.36 HP15_542 TatD-related deoxyribonuclease 0.41 HP15_1349 membrane-fusion protein low > 73
Alteromonas macleodii MIT1002 0.35 MIT1002_02710 putative deoxyribonuclease YjjV 0.09 MIT1002_00919 Multidrug resistance protein MdtN low > 70
Pseudomonas sp. S08-1 0.32 OH686_16550 Putative deoxyribonuclease YjjV 0.31 OH686_05800 hypothetical protein low > 80
Lysobacter sp. OAE881 0.31 ABIE51_RS12580 TatD family hydrolase 0.26 ABIE51_RS15485 HlyD family efflux transporter periplasmic adaptor subunit low > 62
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS16135 TatD family hydrolase 0.23 LRK54_RS13730 HlyD family efflux transporter periplasmic adaptor subunit low > 59
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS06375 TatD family hydrolase 0.23 ABZR86_RS09910 HlyD family secretion protein low > 74
Acinetobacter baumannii LAC-4 0.29 RR41_RS16185 TatD family hydrolase 0.14 RR41_RS12545 HlyD family efflux transporter periplasmic adaptor subunit low > 55
Shewanella sp. ANA-3 0.29 Shewana3_1038 TatD-related deoxyribonuclease (RefSeq) 0.30 Shewana3_2750 secretion protein HlyD family protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.29 SO1213 hydrolase, TatD family (NCBI ptt file) 0.33 SO1705 hypothetical HlyD family secretion protein (NCBI ptt file) low > 76
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_08515 DNAase 0.24 OKGIIK_02975 Hemolysin secretion protein D low > 53
Ralstonia sp. UNC404CL21Col 0.28 ABZR87_RS10420 TatD family hydrolase 0.10 ABZR87_RS05675 HlyD family efflux transporter periplasmic adaptor subunit low > 80
Paraburkholderia graminis OAS925 0.27 ABIE53_002767 TatD DNase family protein 0.12 ABIE53_005376 HlyD family secretion protein low > 113
Herbaspirillum seropedicae SmR1 0.27 HSERO_RS13935 DNAase 0.11 HSERO_RS09730 glycoside hydrolase family 43 low > 78
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_00492 TatD DNase family protein 0.12 H281DRAFT_03452 HlyD family secretion protein low > 103
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS05855 TatD family hydrolase 0.11 QEN71_RS17405 HlyD family efflux transporter periplasmic adaptor subunit low > 153
Variovorax sp. OAS795 0.25 ABID97_RS22725 TatD family hydrolase 0.13 ABID97_RS10425 HlyD family efflux transporter periplasmic adaptor subunit low > 91
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS06110 DNAase 0.09 RR42_RS02295 secretion protein HlyD — —
Ralstonia solanacearum IBSBF1503 0.25 RALBFv3_RS14760 TatD family deoxyribonuclease 0.10 RALBFv3_RS10190 secretion protein HlyD low > 76
Ralstonia solanacearum UW163 0.25 UW163_RS12230 TatD family deoxyribonuclease 0.10 UW163_RS03390 secretion protein HlyD — —
Ralstonia solanacearum GMI1000 0.24 RS_RS05570 TatD family deoxyribonuclease 0.08 RS_RS00805 secretion protein HlyD low > 80
Ralstonia solanacearum PSI07 0.24 RPSI07_RS18600 TatD family deoxyribonuclease 0.09 RPSI07_RS23155 hypothetical protein low > 81
Shewanella amazonensis SB2B 0.22 Sama_0970 TatD-related deoxyribonuclease (RefSeq) 0.35 Sama_3589 HlyD family secretion protein (RefSeq) low > 62

Not shown: 37 genomes with orthologs for CSW01_11925 only; 10 genomes with orthologs for CSW01_08330 only