Conservation of cofitness between CSW01_06750 and CSW01_07515 in Vibrio cholerae E7946 ATCC 55056

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06750 2-methylaconitate cis-trans isomerase PrpF 1.0 CSW01_07515 tail-specific protease 0.69 4
Pseudomonas sp. SVBP6 0.72 COO64_RS09915 prpF 2-methylaconitate cis-trans isomerase PrpF 0.39 COO64_RS06980 carboxy terminal-processing peptidase 0.43 80
Dyella japonica UNC79MFTsu3.2 0.72 ABZR86_RS08430 2-methylaconitate cis-trans isomerase PrpF 0.38 ABZR86_RS17510 carboxy terminal-processing peptidase low > 74
Pseudomonas stutzeri RCH2 0.71 Psest_2318 probable AcnD-accessory protein PrpF 0.41 Psest_2951 C-terminal peptidase (prc) — —
Pseudomonas sp. S08-1 0.71 OH686_01675 probable AcnD-accessory protein PrpF 0.40 OH686_19710 Tail-specific protease precursor — —
Shewanella loihica PV-4 0.71 Shew_1823 putative AcnD-accessory protein PrpF (RefSeq) 0.60 Shew_1802 carboxy-terminal protease (RefSeq) low > 60
Pseudomonas fluorescens SBW25 0.71 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF 0.38 PFLU_RS09980 peptidase S41 low > 109
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF 0.38 PFLU_RS09980 peptidase S41 low > 109
Pseudomonas simiae WCS417 0.71 PS417_21065 3-methylitaconate isomerase 0.39 PS417_09325 peptidase S41 low > 88
Pseudomonas sp. DMC3 0.71 GFF5233 2-methyl-aconitate isomerase 0.39 GFF2584 Tail-specific protease low > 89
Pseudomonas orientalis W4I3 0.70 QF045_RS22890 2-methylaconitate cis-trans isomerase PrpF 0.38 QF045_RS11970 carboxy terminal-processing peptidase low > 93
Pseudomonas putida KT2440 0.70 PP_2337 aconitate isomerase 0.38 PP_1719 Tail-specific protease prc low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_2088 2-methylaconitate cis-trans isomerase 0.39 Psyr_1599 C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A low > 86
Shewanella sp. ANA-3 0.70 Shewana3_3828 methylitaconate delta2-delta3-isomerase (RefSeq) 0.58 Shewana3_1778 carboxy-terminal protease (RefSeq) low > 73
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_2088 2-methylaconitate cis-trans isomerase 0.39 Psyr_1599 C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A low > 86
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_3822 2-methylaconitate cis-trans isomerase 0.39 Pf1N1B4_3741 Periplasmic protease — —
Pseudomonas sp. BP01 0.70 JOY50_RS25735 prpF 2-methylaconitate cis-trans isomerase PrpF 0.38 JOY50_RS27880 carboxy terminal-processing peptidase low > 84
Pseudomonas lactucae CFBP13502 0.70 GEMAOFIL_04358 2-methyl-aconitate isomerase 0.38 GEMAOFIL_02031 Tail-specific protease low > 96
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_4115 2-methylaconitate cis-trans isomerase 0.39 PfGW456L13_4207 Periplasmic protease low > 87
Pseudomonas segetis P6 0.70 ACVTMO_RS13025 prpF 2-methylaconitate cis-trans isomerase PrpF 0.40 ACVTMO_RS08660 carboxy terminal-processing peptidase — —
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_00885 3-methylitaconate isomerase 0.38 AO353_02440 peptidase S41 low > 101
Kangiella aquimarina DSM 16071 0.70 B158DRAFT_1346 2-methylaconitate cis-trans isomerase 0.39 B158DRAFT_1732 C-terminal peptidase (prc) low > 40
Acinetobacter baumannii LAC-4 0.70 RR41_RS03720 2-methylaconitate cis-trans isomerase PrpF 0.27 RR41_RS16485 carboxy terminal-processing peptidase — —
Shewanella oneidensis MR-1 0.70 SO0342 conserved hypothetical protein (NCBI ptt file) 0.58 SO2601 carboxyl-terminal protease (NCBI ptt file) low > 76
Xanthomonas campestris pv. campestris strain 8004 0.69 Xcc-8004.3976.1 2-methylaconitate cis-trans isomerase 0.38 Xcc-8004.914.1 tail-specific protease low > 74
Pseudomonas sp. RS175 0.69 PFR28_02924 2-methyl-aconitate isomerase 0.39 PFR28_03169 Tail-specific protease low > 88
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_6064 2-methylaconitate isomerase 0.38 Pf6N2E2_5780 Periplasmic protease low > 103
Marinobacter adhaerens HP15 0.69 HP15_1929 AcnD-accessory protein PrpF 0.37 HP15_1231 periplasmic tail-specific proteinase — —
Acinetobacter radioresistens SK82 0.69 MPMX26_00659 2-methyl-aconitate isomerase 0.28 MPMX26_00421 Tail-specific protease low > 36
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_20880 3-methylitaconate isomerase 0.39 AO356_19335 peptidase S41 low > 104
Alteromonas macleodii MIT1002 0.68 MIT1002_03132 3-methylitaconate isomerase 0.52 MIT1002_02025 Tail-specific protease precursor — —
Pseudomonas aeruginosa PA14 0.67 IKLFDK_03430 2-methylaconitate cis-trans isomerase PrpF 0.40 IKLFDK_16655 tail-specific protease low > 98
Pseudomonas aeruginosa MRSN321 0.67 DY961_RS08530 prpF;go_process=propionate 2-methylaconitate cis-trans isomerase PrpF 0.40 DY961_RS00630 carboxy terminal-processing peptidase low > 100
Pseudomonas aeruginosa PUPa3 0.67 DQ20_RS44320 prpF;go_process=propionate 2-methylaconitate cis-trans isomerase PrpF 0.40 DQ20_RS40405 carboxy terminal-processing peptidase low > 101
Shewanella amazonensis SB2B 0.67 Sama_3297 hypothetical protein (RefSeq) 0.59 Sama_1585 carboxy-terminal protease (RefSeq) low > 62
Rahnella sp. WP5 0.27 EX31_RS10210 4-oxalomesaconate tautomerase 0.55 EX31_RS24880 carboxy terminal-processing peptidase low > 89
Klebsiella michiganensis M5al 0.24 BWI76_RS14180 hypothetical protein 0.57 BWI76_RS17975 tail-specific protease low > 92
Erwinia amylovora T8 0.23 OLJFJH_13345 4-oxalomesaconate tautomerase 0.56 OLJFJH_13010 carboxy terminal-processing peptidase — —
Klebsiella pneumoniae MKP103 0.22 KDGMDA_08375 4-oxalomesaconate tautomerase 0.57 KDGMDA_25245 carboxy terminal-processing peptidase low > 95
Escherichia coli BW25113 0.20 b0769 ybhH hypothetical protein (NCBI) 0.57 b1830 prc carboxy-terminal protease for penicillin-binding protein 3 (NCBI) low > 76
Escherichia coli Nissle 1917 0.20 ECOLIN_RS04095 4-oxalomesaconate tautomerase 0.57 ECOLIN_RS10190 carboxy terminal-processing peptidase — —
Escherichia coli ECRC62 0.20 BNILDI_21090 ybhH 4-oxalomesaconate tautomerase 0.57 BNILDI_15770 prc carboxy terminal-processing peptidase low > 75
Escherichia fergusonii Becca 0.20 EFB2_03337 Putative isomerase YbhH 0.57 EFB2_02171 Tail-specific protease low > 86
Escherichia coli ECRC100 0.20 OKFHMN_06665 ybhH 4-oxalomesaconate tautomerase 0.57 OKFHMN_26465 prc carboxy terminal-processing peptidase low > 79
Escherichia coli ECRC98 0.20 JDDGAC_10320 ybhH 4-oxalomesaconate tautomerase 0.57 JDDGAC_01040 prc carboxy terminal-processing peptidase low > 87
Escherichia coli ECOR27 0.20 NOLOHH_23095 ybhH 4-oxalomesaconate tautomerase 0.57 NOLOHH_16975 prc carboxy terminal-processing peptidase low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_02944 4-oxalomesaconate tautomerase 0.57 OHPLBJKB_01901 Tail-specific protease low > 74
Escherichia coli ECRC101 0.20 MCAODC_25885 ybhH 4-oxalomesaconate tautomerase 0.57 MCAODC_18940 prc carboxy terminal-processing peptidase low > 87
Escherichia coli ECRC99 0.20 KEDOAH_21300 ybhH 4-oxalomesaconate tautomerase 0.57 KEDOAH_01640 prc carboxy terminal-processing peptidase — —
Escherichia coli ECRC102 0.20 NIAGMN_04715 ybhH 4-oxalomesaconate tautomerase 0.57 NIAGMN_01595 prc carboxy terminal-processing peptidase low > 80
Dickeya dadantii 3937 0.19 DDA3937_RS07810 4-oxalomesaconate tautomerase 0.56 DDA3937_RS11965 carboxy terminal-processing peptidase low > 74

Not shown: 26 genomes with orthologs for CSW01_06750 only; 22 genomes with orthologs for CSW01_07515 only