Conservation of cofitness between CSW01_01135 and CSW01_06950 in Vibrio cholerae E7946 ATCC 55056

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01135 nucleoid occlusion factor SlmA 1.0 CSW01_06950 ATP-dependent RNA helicase HrpA 0.43 13
Pantoea sp. MT58 0.69 IAI47_00605 nucleoid occlusion factor SlmA 0.70 IAI47_09520 ATP-dependent RNA helicase HrpA low > 76
Pantoea agglomerans CFBP13505 P0401 0.69 PagCFBP13505_RS18740 nucleoid occlusion factor SlmA 0.70 PagCFBP13505_RS06635 ATP-dependent RNA helicase HrpA low > 74
Enterobacter sp. TBS_079 0.69 MPMX20_00094 Nucleoid occlusion factor SlmA 0.71 MPMX20_02189 hypothetical protein low > 85
Erwinia amylovora T8 0.68 OLJFJH_05775 nucleoid occlusion factor SlmA 0.69 OLJFJH_13820 ATP-dependent RNA helicase HrpA low > 58
Serratia liquefaciens MT49 0.67 IAI46_24840 nucleoid occlusion factor SlmA 0.70 IAI46_13330 ATP-dependent RNA helicase HrpA low > 87
Pectobacterium carotovorum WPP14 0.66 HER17_RS20845 nucleoid occlusion factor SlmA 0.69 HER17_RS09660 ATP-dependent RNA helicase HrpA low > 75
Rahnella sp. WP5 0.66 EX31_RS14485 nucleoid occlusion factor SlmA 0.70 EX31_RS06495 ATP-dependent RNA helicase HrpA low > 89
Dickeya dadantii 3937 0.66 DDA3937_RS20530 nucleoid occlusion factor SlmA 0.69 DDA3937_RS12270 ATP-dependent RNA helicase HrpA low > 74
Dickeya dianthicola 67-19 0.66 HGI48_RS00685 nucleoid occlusion factor SlmA 0.69 HGI48_RS12360 ATP-dependent RNA helicase HrpA low > 71
Dickeya dianthicola ME23 0.66 DZA65_RS00740 nucleoid occlusion factor SlmA 0.69 DZA65_RS12800 ATP-dependent RNA helicase HrpA low > 75
Shewanella oneidensis MR-1 0.66 SO4251 transcriptional regulator, TetR family (NCBI ptt file) 0.57 SO2229 hrpA ATP-dependent helicase HrpA (NCBI ptt file) low > 76
Klebsiella michiganensis M5al 0.65 BWI76_RS27380 nucleoid occlusion factor SlmA 0.70 BWI76_RS13165 ATP-dependent RNA helicase HrpA low > 92
Shewanella sp. ANA-3 0.65 Shewana3_3773 slmA nucleoid occlusion protein (RefSeq) 0.57 Shewana3_1897 ATP-dependent helicase HrpA (RefSeq) low > 73
Enterobacter asburiae PDN3 0.65 EX28DRAFT_3891 transcriptional regulator, TetR family 0.71 EX28DRAFT_1357 RNA helicase HrpA low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF368 Transcriptional regulator SlmA, TetR family 0.72 GFF2632 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) low > 78
Escherichia coli Nissle 1917 0.65 ECOLIN_RS20745 nucleoid occlusion factor SlmA 0.71 ECOLIN_RS08180 ATP-dependent RNA helicase HrpA
Klebsiella pneumoniae MKP103 0.65 KDGMDA_08045 nucleoid occlusion factor SlmA 0.71 KDGMDA_20775 ATP-dependent RNA helicase HrpA low > 95
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_00061 Nucleoid occlusion factor SlmA 0.71 OHPLBJKB_02301 hypothetical protein low > 74
Escherichia fergusonii Becca 0.64 EFB2_00172 Nucleoid occlusion factor SlmA 0.71 EFB2_02565 hypothetical protein low > 86
Escherichia coli ECRC99 0.64 KEDOAH_12545 slmA nucleoid occlusion factor SlmA 0.71 KEDOAH_26710 hrpA ATP-dependent RNA helicase HrpA
Escherichia coli ECOR38 0.64 HEPCGN_14430 slmA nucleoid occlusion factor SlmA 0.71 HEPCGN_26110 hrpA ATP-dependent RNA helicase HrpA low > 88
Escherichia coli ECRC100 0.64 OKFHMN_15605 slmA nucleoid occlusion factor SlmA 0.71 OKFHMN_01730 hrpA ATP-dependent RNA helicase HrpA low > 79
Escherichia coli ECRC62 0.64 BNILDI_04030 slmA nucleoid occlusion factor SlmA 0.71 BNILDI_17845 hrpA ATP-dependent RNA helicase HrpA low > 75
Erwinia tracheiphila SCR3 0.64 LU632_RS22010 slmA nucleoid occlusion factor SlmA 0.69 LU632_RS12630 hrpA ATP-dependent RNA helicase HrpA low > 73
Escherichia coli ECOR27 0.64 NOLOHH_07485 slmA nucleoid occlusion factor SlmA 0.71 NOLOHH_19390 hrpA ATP-dependent RNA helicase HrpA low > 76
Escherichia coli BL21 0.64 ECD_03498 nucleoid occlusion factor, anti-FtsZ division inhibitor 0.71 ECD_01368 putative ATP-dependent helicase low > 61
Escherichia coli BW25113 0.64 b3641 ttk putative transcriptional regulator (VIMSS) 0.71 b1413 hrpA ATP-dependent helicase (RefSeq) 0.14 64
Escherichia coli ECRC98 0.64 JDDGAC_19230 slmA nucleoid occlusion factor SlmA 0.71 JDDGAC_04220 hrpA ATP-dependent RNA helicase HrpA low > 87
Erwinia tracheiphila HP pepo 2.2 0.64 IJEDHG_07765 slmA nucleoid occlusion factor SlmA 0.69 IJEDHG_23640 hrpA ATP-dependent RNA helicase HrpA
Escherichia coli ECRC101 0.64 MCAODC_06115 slmA nucleoid occlusion factor SlmA 0.71 MCAODC_16205 hrpA ATP-dependent RNA helicase HrpA low > 87
Escherichia coli ECRC102 0.64 NIAGMN_13365 slmA nucleoid occlusion factor SlmA 0.71 NIAGMN_25865 hrpA ATP-dependent RNA helicase HrpA low > 80
Alteromonas macleodii MIT1002 0.62 MIT1002_00047 Synthetically lethal with a defective Min system protein A 0.55 MIT1002_01685 ATP-dependent RNA helicase HrpB
Shewanella loihica PV-4 0.62 Shew_3484 slmA nucleoid occlusion protein (RefSeq) 0.57 Shew_1767 ATP-dependent helicase HrpA (RefSeq)
Shewanella amazonensis SB2B 0.61 Sama_0324 slmA nucleoid occlusion protein (RefSeq) 0.57 Sama_1619 ATP-dependent helicase HrpA (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.52 B158DRAFT_0784 transcriptional regulator, TetR family 0.38 B158DRAFT_1779 ATP-dependent helicase HrpA low > 40
Marinobacter adhaerens HP15 0.49 HP15_3273 nucleoid occlusion protein 0.44 HP15_1863 RNA helicase, ATP-dependent DEAH box, HrpA type low > 73
Variovorax sp. SCN45 0.46 GFF4623 Transcriptional regulator, AcrR family 0.39 GFF247 ATP-dependent helicase HrpA low > 127
Variovorax sp. OAS795 0.46 ABID97_RS05770 nucleoid occlusion factor SlmA 0.39 ABID97_RS16615 ATP-dependent RNA helicase HrpA 0.34 37
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF410 Transcriptional regulator SlmA, TetR family 0.37 GFF4301 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif.
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS01135 dihydroorotate oxidase 0.41 RR42_RS13030 ATP-dependent helicase
Acidovorax sp. GW101-3H11 0.41 Ac3H11_1910 Transcriptional regulator SlmA, TetR family 0.38 Ac3H11_896 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif.
Methylophilus sp. DMC18 0.40 GFF2481 Nucleoid occlusion factor SlmA 0.43 GFF1094 hypothetical protein
Dechlorosoma suillum PS 0.40 Dsui_1307 transcriptional regulator 0.40 Dsui_1373 ATP-dependent helicase HrpA low > 51
Paraburkholderia graminis OAS925 0.40 ABIE53_000415 TetR/AcrR family transcriptional regulator 0.40 ABIE53_002813 ATP-dependent helicase HrpA low > 113
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS00295 nucleoid occlusion factor SlmA 0.37 QEN71_RS05625 ATP-dependent RNA helicase HrpA low > 153
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS01600 dihydroorotate oxidase 0.36 BPHYT_RS12980 ATP-dependent helicase low > 109
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS05180 nucleoid occlusion factor SlmA 0.40 ABZR87_RS11020 ATP-dependent RNA helicase HrpA low > 80
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS09570 nucleoid occlusion factor SlmA 0.41 RALBFv3_RS15490 ATP-dependent RNA helicase HrpA
Ralstonia solanacearum UW163 0.38 UW163_RS04010 nucleoid occlusion factor SlmA 0.41 UW163_RS12950 ATP-dependent RNA helicase HrpA
Ralstonia solanacearum PSI07 0.37 RPSI07_RS23795 nucleoid occlusion factor SlmA 0.41 RPSI07_RS17865 ATP-dependent RNA helicase HrpA low > 81
Pseudomonas syringae pv. syringae B728a 0.13 Psyr_3154 transcriptional regulator, TetR family 0.44 Psyr_3831 ATP-dependent helicase HrpA low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.13 Psyr_3154 transcriptional regulator, TetR family 0.44 Psyr_3831 ATP-dependent helicase HrpA low > 86

Not shown: 1 genomes with orthologs for CSW01_01135 only; 32 genomes with orthologs for CSW01_06950 only